Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:47:40 (1078918): wrapper (7.7.26015): starting
07:47:40 (1078918): wrapper: running run_atlas (--nthreads 2)
[2026-02-16 07:47:40] Arguments: --nthreads 2
[2026-02-16 07:47:40] Threads: 2
[2026-02-16 07:47:40] Checking for CVMFS
[2026-02-16 07:47:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 07:47:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 07:47:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 07:47:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 07:47:41] 2.9.2.0 915081 1775 57700 156274 2 49 31530245 36864000 0 130560 0 491586 99.986 35119 14925 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-16 07:47:41] CVMFS is ok
[2026-02-16 07:47:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-16 07:47:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-16 07:47:41] Further information can be found at the LHC@home message board.
[2026-02-16 07:47:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 07:47:41] Checking for apptainer binary...
[2026-02-16 07:47:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-16 07:47:41] Running /usr/bin/apptainer --version
[2026-02-16 07:47:41] apptainer version 1.4.1-1.1
[2026-02-16 07:47:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 07:47:41] magicA244
[2026-02-16 07:47:41] apptainer works
[2026-02-16 07:47:41] Set ATHENA_PROC_NUMBER=2
[2026-02-16 07:47:41] Set ATHENA_CORE_NUMBER=2
[2026-02-16 07:47:41] Starting ATLAS job with PandaID=7017766665
[2026-02-16 07:47:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 10:48:25]  *** The last 200 lines of the pilot log: ***
[2026-02-16 10:48:25] HOME_URL="https://www.centos.org/"
[2026-02-16 10:48:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-16 10:48:25] 
[2026-02-16 10:48:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-16 10:48:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-16 10:48:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-16 10:48:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-16 10:48:25] 
[2026-02-16 10:48:25] 2026-02-16 09:47:52,785 | INFO     | **************************************
[2026-02-16 10:48:25] 2026-02-16 09:47:53,288 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-16 10:48:25] 2026-02-16 09:47:53,299 | INFO     | sufficient remaining disk space (489278144512 B)
[2026-02-16 10:48:25] 2026-02-16 09:47:53,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-16 10:48:25] 2026-02-16 09:47:53,299 | INFO     | current server update state: UPDATING_FINAL
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | INFO     | update_server=False
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | INFO     | found 0 job(s) in 20 queues
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-16 10:48:25] 2026-02-16 09:47:53,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-16 10:48:25] 2026-02-16 09:47:53,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-16 10:48:25] 2026-02-16 09:47:53,614 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-16 10:48:25] 2026-02-16 09:47:53,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-16 10:48:25] 2026-02-16 09:47:53,614 | INFO     | will abort loop
[2026-02-16 10:48:25] 2026-02-16 09:47:53,667 | INFO     | all job control threads have been joined
[2026-02-16 10:48:25] 2026-02-16 09:47:54,293 | INFO     | all data control threads have been joined
[2026-02-16 10:48:25] 2026-02-16 09:47:54,305 | INFO     | [job] retrieve thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:54,306 | INFO     | [job] queue monitor thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:54,469 | INFO     | all payload control threads have been joined
[2026-02-16 10:48:25] 2026-02-16 09:47:54,620 | INFO     | [job] job monitor thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:54,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-16 10:48:25] 2026-02-16 09:47:54,673 | INFO     | [job] control thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:54,819 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,205 | INFO     | [job] validate thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,264 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,299 | INFO     | [data] control thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,327 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,352 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-02-16 10:48:25] 2026-02-16 09:47:55,353 | INFO     | [payload] validate_post thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,473 | INFO     | [payload] control thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-16 10:48:25] 2026-02-16 09:47:55,672 | INFO     | [payload] failed_post thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:55,730 | INFO     | [data] copytool_in thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:56,672 | INFO     | [data] copytool_out thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:47:59,572 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 10:48:25] 2026-02-16 09:48:18,250 | INFO     | [monitor] cgroup control has ended
[2026-02-16 10:48:25] 2026-02-16 09:48:19,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796661724992)>', '<ExcThread(monitor, started 139796303288064)>']
[2026-02-16 10:48:25] 2026-02-16 09:48:20,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 10:48:25] 2026-02-16 09:48:20,444 | INFO     | [monitor] control thread has ended
[2026-02-16 10:48:25] 2026-02-16 09:48:24,978 | INFO     | all workflow threads have been joined
[2026-02-16 10:48:25] 2026-02-16 09:48:24,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 10:48:25] 2026-02-16 09:48:24,979 | INFO     | traces error code: 0
[2026-02-16 10:48:25] 2026-02-16 09:48:24,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 10:48:25] 2026-02-16 09:48:25,021 [wrapper] ==== pilot stdout END ====
[2026-02-16 10:48:25] 2026-02-16 09:48:25,023 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 10:48:25] 2026-02-16 09:48:25,026 [wrapper] pilotpid: 1082947
[2026-02-16 10:48:25] 2026-02-16 09:48:25,028 [wrapper] Pilot exit status: 0
[2026-02-16 10:48:25] 2026-02-16 09:48:25,033 [wrapper] pandaids: 7017766665
[2026-02-16 10:48:25] 2026-02-16 09:48:25,046 [wrapper] cleanup supervisor_pilot 1092559 1082948
[2026-02-16 10:48:25] 2026-02-16 09:48:25,048 [wrapper] Test setup, not cleaning
[2026-02-16 10:48:25] 2026-02-16 09:48:25,050 [wrapper] apfmon messages muted
[2026-02-16 10:48:25] 2026-02-16 09:48:25,052 [wrapper] ==== wrapper stdout END ====
[2026-02-16 10:48:25] 2026-02-16 09:48:25,053 [wrapper] ==== wrapper stderr END ====
[2026-02-16 10:48:25]  *** Error codes and diagnostics ***
[2026-02-16 10:48:25]     "exeErrorCode": 0,
[2026-02-16 10:48:25]     "exeErrorDiag": "",
[2026-02-16 10:48:25]     "pilotErrorCode": 0,
[2026-02-16 10:48:25]     "pilotErrorDiag": "",
[2026-02-16 10:48:25]  *** Listing of results directory ***
[2026-02-16 10:48:25] total 941284
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc    584627 Feb 15 16:31 pilot3.tar.gz
[2026-02-16 10:48:25] -rwx------ 1 boinc boinc     36322 Feb 15 16:31 runpilot2-wrapper.sh
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc      5111 Feb 15 16:32 queuedata.json
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc       100 Feb 16 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 10:48:25] -rwxr-xr-x 1 boinc boinc      7986 Feb 16 07:47 run_atlas
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc       105 Feb 16 07:47 job.xml
[2026-02-16 10:48:25] -rw-r--r-- 2 boinc boinc 677686420 Feb 16 07:47 EVNT.48431094._000791.pool.root.1
[2026-02-16 10:48:25] -rw-r--r-- 2 boinc boinc    597954 Feb 16 07:47 input.tar.gz
[2026-02-16 10:48:25] -rw-r--r-- 2 boinc boinc     15845 Feb 16 07:47 start_atlas.sh
[2026-02-16 10:48:25] drwxrwx--x 2 boinc boinc      4096 Feb 16 07:47 shared
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc         0 Feb 16 07:47 boinc_setup_complete
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc      6208 Feb 16 07:47 init_data.xml
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc         0 Feb 16 07:47 boinc_lockfile
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc      2556 Feb 16 07:47 pandaJob.out
[2026-02-16 10:48:25] -rw------- 1 boinc boinc    998716 Feb 16 07:47 agis_schedconf.cvmfs.json
[2026-02-16 10:48:25] -rw------- 1 boinc boinc   1513015 Feb 16 07:47 agis_ddmendpoints.agis.ALL.json
[2026-02-16 10:48:25] -rw------- 1 boinc boinc       429 Feb 16 07:48 workernode_map.json
[2026-02-16 10:48:25] drwx------ 5 boinc boinc      4096 Feb 16 07:48 pilot3
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc       531 Feb 16 10:47 boinc_task_state.xml
[2026-02-16 10:48:25] -rw------- 1 boinc boinc 278541144 Feb 16 10:47 HITS.48431096._053442.pool.root.1
[2026-02-16 10:48:25] -rw------- 1 boinc boinc      1015 Feb 16 10:47 memory_monitor_summary.json
[2026-02-16 10:48:25] -rw------- 1 boinc boinc    328406 Feb 16 10:47 log.48431096._053442.job.log.tgz.1
[2026-02-16 10:48:25] -rw------- 1 boinc boinc        95 Feb 16 10:47 pilot_heartbeat.json
[2026-02-16 10:48:25] -rw------- 1 boinc boinc      6317 Feb 16 10:47 heartbeat.json
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc      8192 Feb 16 10:48 boinc_mmap_file
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc        28 Feb 16 10:48 wrapper_checkpoint.txt
[2026-02-16 10:48:25] -rw------- 1 boinc boinc      4738 Feb 16 10:48 pilotlog.txt
[2026-02-16 10:48:25] -rw------- 1 boinc boinc   1533510 Feb 16 10:48 log.48431096._053442.job.log.1
[2026-02-16 10:48:25] -rw------- 1 boinc boinc       357 Feb 16 10:48 output.list
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc       620 Feb 16 10:48 runtime_log
[2026-02-16 10:48:25] -rw------- 1 boinc boinc   1884160 Feb 16 10:48 result.tar.gz
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc      8912 Feb 16 10:48 runtime_log.err
[2026-02-16 10:48:25] -rw------- 1 boinc boinc       662 Feb 16 10:48 6z0LDm8GtB9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4IpKDmSXe1lm.diag
[2026-02-16 10:48:25] -rw-r--r-- 1 boinc boinc      8608 Feb 16 10:48 stderr.txt
[2026-02-16 10:48:25] HITS file was successfully produced:
[2026-02-16 10:48:25] -rw------- 1 boinc boinc 278541144 Feb 16 10:47 shared/HITS.pool.root.1
[2026-02-16 10:48:25]  *** Contents of shared directory: ***
[2026-02-16 10:48:25] total 936268
[2026-02-16 10:48:25] -rw-r--r-- 2 boinc boinc 677686420 Feb 16 07:47 ATLAS.root_0
[2026-02-16 10:48:25] -rw-r--r-- 2 boinc boinc    597954 Feb 16 07:47 input.tar.gz
[2026-02-16 10:48:25] -rw-r--r-- 2 boinc boinc     15845 Feb 16 07:47 start_atlas.sh
[2026-02-16 10:48:25] -rw------- 1 boinc boinc 278541144 Feb 16 10:47 HITS.pool.root.1
[2026-02-16 10:48:25] -rw------- 1 boinc boinc   1884160 Feb 16 10:48 result.tar.gz
10:48:26 (1078918): run_atlas exited; CPU time 21161.258561
10:48:26 (1078918): called boinc_finish(0)

</stderr_txt>
]]>

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