Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:26:13 (67197): wrapper (7.7.26015): starting
02:26:13 (67197): wrapper: running run_atlas (--nthreads 4)
[2026-02-20 02:26:13] Arguments: --nthreads 4
[2026-02-20 02:26:13] Threads: 4
[2026-02-20 02:26:13] Checking for CVMFS
[2026-02-20 02:26:13] No cvmfs_config command found, will try listing directly
[2026-02-20 02:26:13] CVMFS is ok
[2026-02-20 02:26:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-20 02:26:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-20 02:26:13] Further information can be found at the LHC@home message board.
[2026-02-20 02:26:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-20 02:26:13] Checking for apptainer binary...
[2026-02-20 02:26:13] which: no apptainer in ((null))
[2026-02-20 02:26:13] apptainer is not installed, using version from CVMFS
[2026-02-20 02:26:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-20 02:26:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-20 02:26:13] apptainer works
[2026-02-20 02:26:13] Set ATHENA_PROC_NUMBER=4
[2026-02-20 02:26:13] Set ATHENA_CORE_NUMBER=4
[2026-02-20 02:26:13] Starting ATLAS job with PandaID=7017602931
[2026-02-20 02:26:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-20 06:48:31]  *** The last 200 lines of the pilot log: ***
[2026-02-20 06:48:31] 2026-02-20 05:31:02,065 | INFO     | preparing for final server update for job 7017602931 in state='finished'
[2026-02-20 06:48:31] 2026-02-20 05:31:02,065 | INFO     | reading metadata from: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-7017602931/jobReport.json
[2026-02-20 06:48:31] 2026-02-20 05:31:02,068 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot116/slots/0/workernode_map.json
[2026-02-20 06:48:31] 2026-02-20 05:31:02,068 | INFO     | this job has now completed (state=finished)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,069 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,069 | INFO     | log transfer has been attempted: DONE
[2026-02-20 06:48:31] 2026-02-20 05:31:02,069 | INFO     | job 7017602931 has finished - writing final server update
[2026-02-20 06:48:31] 2026-02-20 05:31:02,069 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1781057/.job.ad'
[2026-02-20 06:48:31] 2026-02-20 05:31:02,069 | INFO     | total number of processed events: 400 (read)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,094 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-7017602931/memory_monitor_summary.json (trf name=prmon)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,095 | INFO     | extracted standard info from prmon json
[2026-02-20 06:48:31] 2026-02-20 05:31:02,095 | INFO     | extracted standard memory fields from prmon json
[2026-02-20 06:48:31] 2026-02-20 05:31:02,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-20 06:48:31] 2026-02-20 05:31:02,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-20 06:48:31] 2026-02-20 05:31:02,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-20 06:48:31] 2026-02-20 05:31:02,100 | INFO     | fitting pss+swap vs Time
[2026-02-20 06:48:31] 2026-02-20 05:31:02,101 | INFO     | sum of square deviations: 4286517580.0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,102 | INFO     | sum of deviations: -14386231337.999994
[2026-02-20 06:48:31] 2026-02-20 05:31:02,102 | INFO     | mean x: 1771558115.5
[2026-02-20 06:48:31] 2026-02-20 05:31:02,103 | INFO     | mean y: 2394208.45
[2026-02-20 06:48:31] 2026-02-20 05:31:02,103 | INFO     | intersect: 5948023592.35989
[2026-02-20 06:48:31] 2026-02-20 05:31:02,103 | INFO     | chi2: 1.4134619494936744
[2026-02-20 06:48:31] 2026-02-20 05:31:02,103 | INFO     | sum of square deviations: 4024149870.0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,105 | INFO     | sum of deviations: -13946373148.0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,105 | INFO     | mean x: 1771557963.0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,105 | INFO     | mean y: 2394464.331914894
[2026-02-20 06:48:31] 2026-02-20 05:31:02,106 | INFO     | intersect: 6142028723.358351
[2026-02-20 06:48:31] 2026-02-20 05:31:02,106 | INFO     | chi2: 1.4127405851276629
[2026-02-20 06:48:31] 2026-02-20 05:31:02,106 | INFO     | current chi2=1.4127405851276629 (change=0.05103528724419934 %)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,106 | INFO     | right removable region: 234
[2026-02-20 06:48:31] 2026-02-20 05:31:02,107 | INFO     | sum of square deviations: 4024149870.0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,108 | INFO     | sum of deviations: -43146224698.99999
[2026-02-20 06:48:31] 2026-02-20 05:31:02,108 | INFO     | mean x: 1771558268.0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,109 | INFO     | mean y: 2410724.2510638298
[2026-02-20 06:48:31] 2026-02-20 05:31:02,109 | INFO     | intersect: 18996745818.062878
[2026-02-20 06:48:31] 2026-02-20 05:31:02,109 | INFO     | chi2: 0.13341610758942532
[2026-02-20 06:48:31] 2026-02-20 05:31:02,109 | INFO     | current chi2=0.13341610758942532 (change=90.56104003102332 %)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,109 | INFO     | sum of square deviations: 3772712597.5
[2026-02-20 06:48:31] 2026-02-20 05:31:02,111 | INFO     | sum of deviations: -40380880497.5
[2026-02-20 06:48:31] 2026-02-20 05:31:02,111 | INFO     | mean x: 1771558420.5
[2026-02-20 06:48:31] 2026-02-20 05:31:02,111 | INFO     | mean y: 2409032.256521739
[2026-02-20 06:48:31] 2026-02-20 05:31:02,112 | INFO     | intersect: 18964120804.29944
[2026-02-20 06:48:31] 2026-02-20 05:31:02,112 | INFO     | chi2: 0.1297526595362358
[2026-02-20 06:48:31] 2026-02-20 05:31:02,112 | INFO     | current chi2=0.1297526595362358 (change=2.7458813777294537 %)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,112 | INFO     | left removable region: 20
[2026-02-20 06:48:31] 2026-02-20 05:31:02,112 | INFO     | sum of square deviations: 3038856977.5
[2026-02-20 06:48:31] 2026-02-20 05:31:02,114 | INFO     | sum of deviations: -29314568639.000004
[2026-02-20 06:48:31] 2026-02-20 05:31:02,114 | INFO     | mean x: 1771558542.5
[2026-02-20 06:48:31] 2026-02-20 05:31:02,114 | INFO     | mean y: 2402960.4392523365
[2026-02-20 06:48:31] 2026-02-20 05:31:02,114 | INFO     | intersect: 17091879324.952713
[2026-02-20 06:48:31] 2026-02-20 05:31:02,114 | INFO     | chi2: 0.11751106150030162
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | current memory leak: -9.65 B/s (using 214 data points, chi2=0.12)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | could have reported an average CPU frequency of 2677 MHz (12 samples)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | ..............................
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | . Timing measurements:
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | . get job = 0 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | . initial setup = 8 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | . payload setup = 9 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,115 | INFO     | . stage-in = 0 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,116 | INFO     | . payload execution = 14635 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,116 | INFO     | . stage-out = 1 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,116 | INFO     | . log creation = 0 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,116 | INFO     | ..............................
[2026-02-20 06:48:31] 2026-02-20 05:31:02,506 | INFO     | time since job start (14665s) is within the limit (349056.0s)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,705 | INFO     | 
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | job summary report
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | --------------------------------------------------
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | PanDA job id: 7017602931
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | task id: 48431096
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | errors: (none)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | pilot state: finished 
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | transexitcode: 0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | exeerrorcode: 0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | exeerrordiag: 
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | exitcode: 0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | exitmsg: OK
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | cpuconsumptiontime: 56199 s
[2026-02-20 06:48:31] 2026-02-20 05:31:02,706 | INFO     | nevents: 400
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | neventsw: 0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | pid: 77027
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | pgrp: 77027
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | corecount: 4
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | event service: False
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | sizes: {0: 2281744, 1: 2282205, 11: 2282205, 14648: 2313573, 14649: 2313572, 14650: 2322650, 14652: 2322834, 14654: 2323028}
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | --------------------------------------------------
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | 
[2026-02-20 06:48:31] 2026-02-20 05:31:02,707 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-02-20 06:48:31] 2026-02-20 05:31:02,726 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,728 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-20 06:48:31] 2026-02-20 05:31:02,728 | INFO     | job 7017602931 has completed (purged errors)
[2026-02-20 06:48:31] 2026-02-20 05:31:02,728 | INFO     | overall cleanup function is called
[2026-02-20 06:48:31] 2026-02-20 05:31:03,735 | INFO     | --- collectZombieJob: --- 10, [77027]
[2026-02-20 06:48:31] 2026-02-20 05:31:03,736 | INFO     | zombie collector waiting for pid 77027
[2026-02-20 06:48:31] 2026-02-20 05:31:03,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-20 06:48:31] 2026-02-20 05:31:03,736 | INFO     | collected zombie processes
[2026-02-20 06:48:31] 2026-02-20 05:31:03,736 | INFO     | will attempt to kill all subprocesses of pid=77027
[2026-02-20 06:48:31] 2026-02-20 05:31:04,594 | INFO     | process IDs to be killed: [77027] (in reverse order)
[2026-02-20 06:48:31] 2026-02-20 05:31:04,866 | WARNING  | found no corresponding commands to process id(s)
[2026-02-20 06:48:31] 2026-02-20 05:31:04,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-20 06:48:31] 2026-02-20 05:31:04,901 | INFO     | did not find any defunct processes belonging to 77027
[2026-02-20 06:48:31] 2026-02-20 05:31:04,933 | INFO     | did not find any defunct processes belonging to 77027
[2026-02-20 06:48:31] 2026-02-20 05:31:04,934 | INFO     | ready for new job
[2026-02-20 06:48:31] 2026-02-20 05:31:04,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-20 06:48:31] 2026-02-20 05:31:04,937 | INFO     | **************************************
[2026-02-20 06:48:31] 2026-02-20 05:31:04,937 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-20 06:48:31] 2026-02-20 05:31:04,937 | INFO     | **************************************
[2026-02-20 06:48:31] 2026-02-20 05:31:04,937 | INFO     | 
[2026-02-20 06:48:31] 2026-02-20 05:31:04,945 | INFO     | architecture information:
[2026-02-20 06:48:31] 2026-02-20 05:31:04,946 | INFO     | executing command: cat /etc/os-release
[2026-02-20 06:48:31] 2026-02-20 05:31:04,969 | INFO     | cat /etc/os-release:
[2026-02-20 06:48:31] NAME="CentOS Linux"
[2026-02-20 06:48:31] VERSION="7 (Core)"
[2026-02-20 06:48:31] ID="centos"
[2026-02-20 06:48:31] ID_LIKE="rhel fedora"
[2026-02-20 06:48:31] VERSION_ID="7"
[2026-02-20 06:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-20 06:48:31] ANSI_COLOR="0;31"
[2026-02-20 06:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-20 06:48:31] HOME_URL="https://www.centos.org/"
[2026-02-20 06:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-20 06:48:31] 
[2026-02-20 06:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-20 06:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-20 06:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-20 06:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-20 06:48:31] 
[2026-02-20 06:48:31] 2026-02-20 05:31:04,970 | INFO     | **************************************
[2026-02-20 06:48:31] 2026-02-20 05:31:05,473 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-02-20 06:48:31] 2026-02-20 05:31:05,497 | INFO     | sufficient remaining disk space (3141850365952 B)
[2026-02-20 06:48:31] 2026-02-20 05:31:05,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-20 06:48:31] 2026-02-20 05:31:05,497 | INFO     | current server update state: UPDATING_FINAL
[2026-02-20 06:48:31] 2026-02-20 05:31:05,498 | INFO     | update_server=False
[2026-02-20 06:48:31] 2026-02-20 05:31:05,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-20 06:48:31] 2026-02-20 05:31:05,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-20 06:48:31] 2026-02-20 05:31:05,498 | INFO     | aborting loop
[2026-02-20 06:48:31] 2026-02-20 05:31:05,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-20 06:48:31] 2026-02-20 05:31:06,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-20 06:48:31] 2026-02-20 05:31:06,458 | INFO     | all job control threads have been joined
[2026-02-20 06:48:31] 2026-02-20 05:31:06,501 | INFO     | [job] retrieve thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:06,503 | INFO     | [job] job monitor thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:06,552 | INFO     | all data control threads have been joined
[2026-02-20 06:48:31] 2026-02-20 05:31:06,574 | INFO     | [payload] execute_payloads thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:06,764 | INFO     | all payload control threads have been joined
[2026-02-20 06:48:31] 2026-02-20 05:31:06,849 | INFO     | [job] validate thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:06,901 | INFO     | [job] create_data_payload thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-20 06:48:31] 2026-02-20 05:31:07,341 | INFO     | [payload] failed_post thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,391 | INFO     | [payload] validate_pre thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,464 | INFO     | [job] control thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,542 | INFO     | [payload] validate_post thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,557 | INFO     | [data] control thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,769 | INFO     | [payload] control thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:07,849 | INFO     | [data] copytool_in thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:08,229 | INFO     | [job] queue monitor thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:08,236 | INFO     | [data] copytool_out thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:09,979 | INFO     | [data] queue_monitor thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:16,312 | INFO     | job.realtimelogging is not enabled
[2026-02-20 06:48:31] 2026-02-20 05:31:17,318 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-20 06:48:31] 2026-02-20 05:31:36,661 | INFO     | PID=71449 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-20 06:48:31] 2026-02-20 05:31:36,661 | INFO     | .. there are 5 such processes running
[2026-02-20 06:48:31] 2026-02-20 05:31:36,661 | INFO     | found 0 job(s) in 20 queues
[2026-02-20 06:48:31] 2026-02-20 05:31:36,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-20 06:48:31] 2026-02-20 05:31:36,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-20 06:48:31] 2026-02-20 05:32:00,496 | INFO     | [monitor] cgroup control has ended
[2026-02-20 06:48:31] 2026-02-20 05:32:01,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22810953959232)>', '<ExcThread(monitor, started 22810717341440)>']
[2026-02-20 06:48:31] 2026-02-20 05:32:01,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-20 06:48:31] 2026-02-20 05:32:01,782 | INFO     | [monitor] control thread has ended
[2026-02-20 06:48:31] 2026-02-20 05:32:06,384 | INFO     | all workflow threads have been joined
[2026-02-20 06:48:31] 2026-02-20 05:32:06,385 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-20 06:48:31] 2026-02-20 05:32:06,385 | INFO     | traces error code: 0
[2026-02-20 06:48:31] 2026-02-20 05:32:06,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-20 06:48:31] 2026-02-20 05:32:06,530 [wrapper] ==== pilot stdout END ====
[2026-02-20 06:48:31] 2026-02-20 05:32:06,534 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-20 06:48:31] 2026-02-20 05:32:06,537 [wrapper] pilotpid: 71449
[2026-02-20 06:48:31] 2026-02-20 05:32:06,542 [wrapper] Pilot exit status: 0
[2026-02-20 06:48:31] 2026-02-20 05:32:06,557 [wrapper] pandaids: 7017602931
[2026-02-20 06:48:31] 2026-02-20 05:32:06,793 [wrapper] cleanup supervisor_pilot  254863 71450
[2026-02-20 06:48:31] 2026-02-20 05:32:06,801 [wrapper] Test setup, not cleaning
[2026-02-20 06:48:31] 2026-02-20 05:32:06,805 [wrapper] apfmon messages muted
[2026-02-20 06:48:31] 2026-02-20 05:32:06,809 [wrapper] ==== wrapper stdout END ====
[2026-02-20 06:48:31] 2026-02-20 05:32:06,813 [wrapper] ==== wrapper stderr END ====
[2026-02-20 06:48:31]  *** Error codes and diagnostics ***
[2026-02-20 06:48:31]     "exeErrorCode": 0,
[2026-02-20 06:48:31]     "exeErrorDiag": "",
[2026-02-20 06:48:31]     "pilotErrorCode": 0,
[2026-02-20 06:48:31]     "pilotErrorDiag": "",
[2026-02-20 06:48:31]  *** Listing of results directory ***
[2026-02-20 06:48:31] total 943948
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc    584627 Feb 15 11:33 pilot3.tar.gz
[2026-02-20 06:48:31] -rwx------ 1 boinc boinc     36322 Feb 15 11:34 runpilot2-wrapper.sh
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc      5111 Feb 15 11:36 queuedata.json
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc       100 Feb 20 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-20 06:48:31] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 02:26 run_atlas
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc       105 Feb 20 02:26 job.xml
[2026-02-20 06:48:31] -rw-r--r-- 2 boinc boinc 676651803 Feb 20 02:26 EVNT.48431094._000200.pool.root.1
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc      6700 Feb 20 02:26 init_data.xml
[2026-02-20 06:48:31] drwxrwx--x 2 boinc boinc      4096 Feb 20 02:26 shared
[2026-02-20 06:48:31] -rw-r--r-- 2 boinc boinc    597966 Feb 20 02:26 input.tar.gz
[2026-02-20 06:48:31] -rw-r--r-- 2 boinc boinc     15845 Feb 20 02:26 start_atlas.sh
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc         0 Feb 20 02:26 boinc_lockfile
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc      2556 Feb 20 02:26 pandaJob.out
[2026-02-20 06:48:31] -rw------- 1 boinc boinc   1001559 Feb 20 02:26 agis_schedconf.cvmfs.json
[2026-02-20 06:48:31] -rw------- 1 boinc boinc       443 Feb 20 02:26 workernode_map.json
[2026-02-20 06:48:31] drwx------ 5 boinc boinc      4096 Feb 20 02:26 pilot3
[2026-02-20 06:48:31] -rw------- 1 boinc boinc 281141052 Feb 20 06:30 HITS.48431096._050740.pool.root.1
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc       527 Feb 20 06:30 boinc_task_state.xml
[2026-02-20 06:48:31] -rw------- 1 boinc boinc        95 Feb 20 06:30 pilot_heartbeat.json
[2026-02-20 06:48:31] -rw------- 1 boinc boinc      1027 Feb 20 06:30 memory_monitor_summary.json
[2026-02-20 06:48:31] -rw------- 1 boinc boinc   1513015 Feb 20 06:30 agis_ddmendpoints.agis.ALL.json
[2026-02-20 06:48:31] -rw------- 1 boinc boinc    429430 Feb 20 06:30 log.48431096._050740.job.log.tgz.1
[2026-02-20 06:48:31] -rw------- 1 boinc boinc      6356 Feb 20 06:31 heartbeat.json
[2026-02-20 06:48:31] -rw------- 1 boinc boinc      4901 Feb 20 06:32 pilotlog.txt
[2026-02-20 06:48:31] -rw------- 1 boinc boinc   2011105 Feb 20 06:32 log.48431096._050740.job.log.1
[2026-02-20 06:48:31] -rw------- 1 boinc boinc       357 Feb 20 06:32 output.list
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc       620 Feb 20 06:32 runtime_log
[2026-02-20 06:48:31] -rw------- 1 boinc boinc   2457600 Feb 20 06:32 result.tar.gz
[2026-02-20 06:48:31] -rw------- 1 boinc boinc       666 Feb 20 06:32 zABODmIdoB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDupKDmhOtOfm.diag
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc      9222 Feb 20 06:32 runtime_log.err
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc        26 Feb 20 06:48 wrapper_checkpoint.txt
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc      8192 Feb 20 06:48 boinc_mmap_file
[2026-02-20 06:48:31] -rw-r--r-- 1 boinc boinc     21129 Feb 20 06:48 stderr.txt
[2026-02-20 06:48:31] HITS file was successfully produced:
[2026-02-20 06:48:31] -rw------- 1 boinc boinc 281141052 Feb 20 06:30 shared/HITS.pool.root.1
[2026-02-20 06:48:31]  *** Contents of shared directory: ***
[2026-02-20 06:48:31] total 938356
[2026-02-20 06:48:31] -rw-r--r-- 2 boinc boinc 676651803 Feb 20 02:26 ATLAS.root_0
[2026-02-20 06:48:31] -rw-r--r-- 2 boinc boinc    597966 Feb 20 02:26 input.tar.gz
[2026-02-20 06:48:31] -rw-r--r-- 2 boinc boinc     15845 Feb 20 02:26 start_atlas.sh
[2026-02-20 06:48:31] -rw------- 1 boinc boinc 281141052 Feb 20 06:30 HITS.pool.root.1
[2026-02-20 06:48:31] -rw------- 1 boinc boinc   2457600 Feb 20 06:32 result.tar.gz
06:48:32 (67197): run_atlas exited; CPU time 57336.932780
06:48:32 (67197): called boinc_finish(0)

</stderr_txt>
]]>

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