Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
04:31:18 (1838636): wrapper (7.7.26015): starting
04:31:18 (1838636): wrapper: running run_atlas (--nthreads 4)
[2026-02-17 04:31:18] Arguments: --nthreads 4
[2026-02-17 04:31:18] Threads: 4
[2026-02-17 04:31:18] Checking for CVMFS
[2026-02-17 04:31:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-17 04:31:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-17 04:31:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-17 04:31:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-17 04:31:18] 2.13.3.0 11582 1666 41888 156305 3 50 26887238 33554432 0 130560 0 907051 99.989 53126 192 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-17 04:31:18] CVMFS is ok
[2026-02-17 04:31:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-17 04:31:18] Checking for apptainer binary...
[2026-02-17 04:31:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-17 04:31:18] Running /usr/bin/apptainer --version
[2026-02-17 04:31:18] apptainer version 1.4.5
[2026-02-17 04:31:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-17 04:31:18] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-17 04:31:18] apptainer works
[2026-02-17 04:31:18] Set ATHENA_PROC_NUMBER=4
[2026-02-17 04:31:18] Set ATHENA_CORE_NUMBER=4
[2026-02-17 04:31:18] Starting ATLAS job with PandaID=7017658663
[2026-02-17 04:31:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-17 05:54:38]  *** The last 200 lines of the pilot log: ***
[2026-02-17 05:54:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-17 05:54:38]  is_altstaged=None
[2026-02-17 05:54:38]  is_tar=False
[2026-02-17 05:54:38]  lfn=log.48431096._051540.job.log.tgz.1
[2026-02-17 05:54:38]  mtime=0
[2026-02-17 05:54:38]  protocol_id=None
[2026-02-17 05:54:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-17 05:54:38]  replicas=None
[2026-02-17 05:54:38]  scope=mc23_13p6TeV
[2026-02-17 05:54:38]  status=None
[2026-02-17 05:54:38]  status_code=0
[2026-02-17 05:54:38]  storage_token=
[2026-02-17 05:54:38]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7017658663/log.48431096._051540.job.log.tgz.1
[2026-02-17 05:54:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/6e/log.48431096._051540.job.log.tgz.1
[2026-02-17 05:54:38]  workdir=None
[2026-02-17 05:54:38] ]
[2026-02-17 05:54:38] 2026-02-17 03:53:56,244 | INFO     | transferring file log.48431096._051540.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7017658663/log.48431096._051540.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-17 05:54:38] 2026-02-17 03:53:56,244 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7017658663/log.48431096._051540.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48431096._051540.job
[2026-02-17 05:54:38] 2026-02-17 03:53:56,253 | INFO     | adding to output.list: log.48431096._051540.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/6e/log.48431096._051540.job.log.tg
[2026-02-17 05:54:38] 2026-02-17 03:53:56,253 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-17 05:54:38] 2026-02-17 03:53:56,253 | INFO     | summary of transferred files:
[2026-02-17 05:54:38] 2026-02-17 03:53:56,253 | INFO     |  -- lfn=log.48431096._051540.job.log.tgz.1, status_code=0, status=transferred
[2026-02-17 05:54:38] 2026-02-17 03:53:56,254 | INFO     | stage-out finished correctly
[2026-02-17 05:54:38] 2026-02-17 03:53:56,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-17 05:54:38] 2026-02-17 03:53:56,881 | INFO     | time since job start (4950s) is within the limit (349056.0s)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,057 | WARNING  | process 1847089 can no longer be monitored (due to stat problems) - aborting
[2026-02-17 05:54:38] 2026-02-17 03:53:58,057 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7017658663/memory_monitor_summary.json (trf name=prmon)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,134 | INFO     | number of running child processes to parent process 1847089: 1
[2026-02-17 05:54:38] 2026-02-17 03:53:58,134 | INFO     | maximum number of monitored processes: 6
[2026-02-17 05:54:38] 2026-02-17 03:53:58,495 | INFO     | job 7017658663 has state=finished
[2026-02-17 05:54:38] 2026-02-17 03:53:58,495 | INFO     | preparing for final server update for job 7017658663 in state='finished'
[2026-02-17 05:54:38] 2026-02-17 03:53:58,496 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7017658663/jobReport.json
[2026-02-17 05:54:38] 2026-02-17 03:53:58,497 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-17 05:54:38] 2026-02-17 03:53:58,497 | INFO     | this job has now completed (state=finished)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,497 | INFO     | log transfer has been attempted: DONE
[2026-02-17 05:54:38] 2026-02-17 03:53:58,497 | INFO     | job 7017658663 has finished - writing final server update
[2026-02-17 05:54:38] 2026-02-17 03:53:58,497 | INFO     | total number of processed events: 400 (read)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,499 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7017658663/memory_monitor_summary.json (trf name=prmon)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,499 | INFO     | extracted standard info from prmon json
[2026-02-17 05:54:38] 2026-02-17 03:53:58,499 | INFO     | extracted standard memory fields from prmon json
[2026-02-17 05:54:38] 2026-02-17 03:53:58,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-17 05:54:38] 2026-02-17 03:53:58,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-17 05:54:38] 2026-02-17 03:53:58,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | fitting pss+swap vs Time
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | sum of square deviations: 125630262.5
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | sum of deviations: -15264012920.0
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | mean x: 1771298033.5
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | mean y: 2564046.891891892
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | intersect: 215214373132.41852
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | chi2: 0.14535229248779644
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | current memory leak: -121.50 B/s (using 74 data points, chi2=0.15)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | could have reported an average CPU frequency of 3356 MHz (6 samples)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | ..............................
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | . Timing measurements:
[2026-02-17 05:54:38] 2026-02-17 03:53:58,500 | INFO     | . get job = 0 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | . initial setup = 3 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | . payload setup = 2 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | . stage-in = 0 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | . payload execution = 4932 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | . stage-out = 0 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | . log creation = 0 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,501 | INFO     | ..............................
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | 
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | job summary report
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | --------------------------------------------------
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | PanDA job id: 7017658663
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | task id: 48431096
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | errors: (none)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | pilot state: finished 
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | transexitcode: 0
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | exeerrorcode: 0
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | exeerrordiag: 
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | exitcode: 0
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | exitmsg: OK
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | cpuconsumptiontime: 18889 s
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | nevents: 400
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | neventsw: 0
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | pid: 1847089
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | pgrp: 1847089
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | corecount: 4
[2026-02-17 05:54:38] 2026-02-17 03:53:58,527 | INFO     | event service: False
[2026-02-17 05:54:38] 2026-02-17 03:53:58,528 | INFO     | sizes: {0: 2281732, 1: 2282193, 11: 2282193, 4939: 2317639, 4940: 2317639, 4941: 2317833}
[2026-02-17 05:54:38] 2026-02-17 03:53:58,528 | INFO     | --------------------------------------------------
[2026-02-17 05:54:38] 2026-02-17 03:53:58,528 | INFO     | 
[2026-02-17 05:54:38] 2026-02-17 03:53:58,528 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-17 05:54:38] 2026-02-17 03:53:58,535 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | job 7017658663 has completed (purged errors)
[2026-02-17 05:54:38] 2026-02-17 03:53:58,536 | INFO     | overall cleanup function is called
[2026-02-17 05:54:38] 2026-02-17 03:53:59,543 | INFO     | --- collectZombieJob: --- 10, [1847089]
[2026-02-17 05:54:38] 2026-02-17 03:53:59,543 | INFO     | zombie collector waiting for pid 1847089
[2026-02-17 05:54:38] 2026-02-17 03:53:59,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-17 05:54:38] 2026-02-17 03:53:59,543 | INFO     | collected zombie processes
[2026-02-17 05:54:38] 2026-02-17 03:53:59,543 | INFO     | will attempt to kill all subprocesses of pid=1847089
[2026-02-17 05:54:38] 2026-02-17 03:53:59,629 | INFO     | process IDs to be killed: [1847089] (in reverse order)
[2026-02-17 05:54:38] 2026-02-17 03:53:59,657 | WARNING  | found no corresponding commands to process id(s)
[2026-02-17 05:54:38] 2026-02-17 03:53:59,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-17 05:54:38] 2026-02-17 03:53:59,659 | INFO     | did not find any defunct processes belonging to 1847089
[2026-02-17 05:54:38] 2026-02-17 03:53:59,661 | INFO     | did not find any defunct processes belonging to 1847089
[2026-02-17 05:54:38] 2026-02-17 03:53:59,661 | INFO     | ready for new job
[2026-02-17 05:54:38] 2026-02-17 03:53:59,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-17 05:54:38] 2026-02-17 03:53:59,662 | INFO     | **************************************
[2026-02-17 05:54:38] 2026-02-17 03:53:59,662 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-17 05:54:38] 2026-02-17 03:53:59,662 | INFO     | **************************************
[2026-02-17 05:54:38] 2026-02-17 03:53:59,662 | INFO     | 
[2026-02-17 05:54:38] 2026-02-17 03:53:59,663 | INFO     | architecture information:
[2026-02-17 05:54:38] 2026-02-17 03:53:59,663 | INFO     | executing command: cat /etc/os-release
[2026-02-17 05:54:38] 2026-02-17 03:53:59,669 | INFO     | cat /etc/os-release:
[2026-02-17 05:54:38] NAME="CentOS Linux"
[2026-02-17 05:54:38] VERSION="7 (Core)"
[2026-02-17 05:54:38] ID="centos"
[2026-02-17 05:54:38] ID_LIKE="rhel fedora"
[2026-02-17 05:54:38] VERSION_ID="7"
[2026-02-17 05:54:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-17 05:54:38] ANSI_COLOR="0;31"
[2026-02-17 05:54:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-17 05:54:38] HOME_URL="https://www.centos.org/"
[2026-02-17 05:54:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-17 05:54:38] 
[2026-02-17 05:54:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-17 05:54:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-17 05:54:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-17 05:54:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-17 05:54:38] 
[2026-02-17 05:54:38] 2026-02-17 03:53:59,669 | INFO     | **************************************
[2026-02-17 05:54:38] 2026-02-17 03:54:00,172 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | INFO     | sufficient remaining disk space (55567187968 B)
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | INFO     | current server update state: UPDATING_FINAL
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | INFO     | update_server=False
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-17 05:54:38] 2026-02-17 03:54:00,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-17 05:54:38] 2026-02-17 03:54:00,355 | INFO     | all data control threads have been joined
[2026-02-17 05:54:38] 2026-02-17 03:54:00,359 | INFO     | all job control threads have been joined
[2026-02-17 05:54:38] 2026-02-17 03:54:00,637 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-17 05:54:38] 2026-02-17 03:54:00,638 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-17 05:54:38] 2026-02-17 03:54:00,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-17 05:54:38] 2026-02-17 03:54:00,638 | INFO     | will abort loop
[2026-02-17 05:54:38] 2026-02-17 03:54:00,957 | INFO     | all payload control threads have been joined
[2026-02-17 05:54:38] 2026-02-17 03:54:01,151 | INFO     | job.realtimelogging is not enabled
[2026-02-17 05:54:38] 2026-02-17 03:54:01,184 | INFO     | [job] retrieve thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,185 | INFO     | [job] queue monitor thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,240 | INFO     | [payload] execute_payloads thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,360 | INFO     | [data] control thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,360 | INFO     | [job] control thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,642 | INFO     | [job] job monitor thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,800 | INFO     | [payload] validate_post thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:01,961 | INFO     | [payload] control thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,156 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,162 | INFO     | [job] validate thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,184 | INFO     | [data] copytool_out thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,252 | INFO     | [job] create_data_payload thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,316 | INFO     | [data] copytool_in thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,331 | INFO     | [payload] validate_pre thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,776 | INFO     | [payload] failed_post thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:02,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-17 05:54:38] 2026-02-17 03:54:06,844 | INFO     | [data] queue_monitor thread has finished
[2026-02-17 05:54:38] 2026-02-17 03:54:30,045 | INFO     | PID=1842461 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-17 05:54:38] 2026-02-17 03:54:30,045 | INFO     | found 0 job(s) in 20 queues
[2026-02-17 05:54:38] 2026-02-17 03:54:30,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-17 05:54:38] 2026-02-17 03:54:30,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-17 05:54:38] 2026-02-17 03:54:31,341 | INFO     | [monitor] cgroup control has ended
[2026-02-17 05:54:38] 2026-02-17 03:54:33,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120840144704)>', '<ExcThread(monitor, started 140120061626112)>']
[2026-02-17 05:54:38] 2026-02-17 03:54:34,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-17 05:54:38] 2026-02-17 03:54:34,061 | INFO     | [monitor] control thread has ended
[2026-02-17 05:54:38] 2026-02-17 03:54:38,292 | INFO     | all workflow threads have been joined
[2026-02-17 05:54:38] 2026-02-17 03:54:38,293 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-17 05:54:38] 2026-02-17 03:54:38,293 | INFO     | traces error code: 0
[2026-02-17 05:54:38] 2026-02-17 03:54:38,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-17 05:54:38] 2026-02-17 03:54:38,332 [wrapper] ==== pilot stdout END ====
[2026-02-17 05:54:38] 2026-02-17 03:54:38,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-17 05:54:38] 2026-02-17 03:54:38,335 [wrapper] pilotpid: 1842461
[2026-02-17 05:54:38] 2026-02-17 03:54:38,337 [wrapper] Pilot exit status: 0
[2026-02-17 05:54:38] 2026-02-17 03:54:38,342 [wrapper] pandaids: 7017658663
[2026-02-17 05:54:38] 2026-02-17 03:54:38,363 [wrapper] cleanup supervisor_pilot 1901728 1842462
[2026-02-17 05:54:38] 2026-02-17 03:54:38,364 [wrapper] Test setup, not cleaning
[2026-02-17 05:54:38] 2026-02-17 03:54:38,365 [wrapper] apfmon messages muted
[2026-02-17 05:54:38] 2026-02-17 03:54:38,367 [wrapper] ==== wrapper stdout END ====
[2026-02-17 05:54:38] 2026-02-17 03:54:38,368 [wrapper] ==== wrapper stderr END ====
[2026-02-17 05:54:38]  *** Error codes and diagnostics ***
[2026-02-17 05:54:38]     "exeErrorCode": 0,
[2026-02-17 05:54:38]     "exeErrorDiag": "",
[2026-02-17 05:54:38]     "pilotErrorCode": 0,
[2026-02-17 05:54:38]     "pilotErrorDiag": "",
[2026-02-17 05:54:38]  *** Listing of results directory ***
[2026-02-17 05:54:38] total 932384
[2026-02-17 05:54:38] -rw-r--r-- 1 ek ek    584627 Feb 15 15:09 pilot3.tar.gz
[2026-02-17 05:54:38] -rwx------ 1 ek ek     36322 Feb 15 15:09 runpilot2-wrapper.sh
[2026-02-17 05:54:38] -rw-r--r-- 1 ek ek      5111 Feb 15 15:09 queuedata.json
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek       100 Feb 17 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-17 05:54:38] -rwxr-xr-x 1 ek ek      7986 Feb 17 04:31 run_atlas
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek       105 Feb 17 04:31 job.xml
[2026-02-17 05:54:38] -rw-r--r-- 2 ek ek 674021421 Feb 17 04:31 EVNT.48431094._000241.pool.root.1
[2026-02-17 05:54:38] -rw-r--r-- 2 ek ek    597969 Feb 17 04:31 input.tar.gz
[2026-02-17 05:54:38] -rw-r--r-- 2 ek ek     15845 Feb 17 04:31 start_atlas.sh
[2026-02-17 05:54:38] drwxrwx--x 2 ek ek      4096 Feb 17 04:31 shared
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek         0 Feb 17 04:31 boinc_setup_complete
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek      9840 Feb 17 04:31 init_data.xml
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek         0 Feb 17 04:31 boinc_lockfile
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek      2556 Feb 17 04:31 pandaJob.out
[2026-02-17 05:54:38] -rw------- 1 ek ek        50 Feb 17 04:31 setup.sh.local
[2026-02-17 05:54:38] -rw------- 1 ek ek   1001145 Feb 17 04:31 agis_schedconf.cvmfs.json
[2026-02-17 05:54:38] -rw------- 1 ek ek   1513015 Feb 17 04:31 agis_ddmendpoints.agis.ALL.json
[2026-02-17 05:54:38] -rw------- 1 ek ek       433 Feb 17 04:31 workernode_map.json
[2026-02-17 05:54:38] drwx------ 5 ek ek      4096 Feb 17 04:31 pilot3
[2026-02-17 05:54:38] -rw------- 1 ek ek 274761795 Feb 17 05:53 HITS.48431096._051540.pool.root.1
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek       530 Feb 17 05:53 boinc_task_state.xml
[2026-02-17 05:54:38] -rw------- 1 ek ek      1037 Feb 17 05:53 memory_monitor_summary.json
[2026-02-17 05:54:38] -rw------- 1 ek ek    294003 Feb 17 05:53 log.48431096._051540.job.log.tgz.1
[2026-02-17 05:54:38] -rw------- 1 ek ek        95 Feb 17 05:53 pilot_heartbeat.json
[2026-02-17 05:54:38] -rw------- 1 ek ek      6352 Feb 17 05:53 heartbeat.json
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek      8192 Feb 17 05:54 boinc_mmap_file
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek        27 Feb 17 05:54 wrapper_checkpoint.txt
[2026-02-17 05:54:38] -rw------- 1 ek ek      5002 Feb 17 05:54 pilotlog.txt
[2026-02-17 05:54:38] -rw------- 1 ek ek    723800 Feb 17 05:54 log.48431096._051540.job.log.1
[2026-02-17 05:54:38] -rw------- 1 ek ek       357 Feb 17 05:54 output.list
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek       620 Feb 17 05:54 runtime_log
[2026-02-17 05:54:38] -rw------- 1 ek ek   1034240 Feb 17 05:54 result.tar.gz
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek      9501 Feb 17 05:54 runtime_log.err
[2026-02-17 05:54:38] -rw------- 1 ek ek       665 Feb 17 05:54 KI7KDmK3qB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm01pKDmrFbCzm.diag
[2026-02-17 05:54:38] -rw-rw-r-- 1 ek ek     21265 Feb 17 05:54 stderr.txt
[2026-02-17 05:54:38] HITS file was successfully produced:
[2026-02-17 05:54:38] -rw------- 1 ek ek 274761795 Feb 17 05:53 shared/HITS.pool.root.1
[2026-02-17 05:54:38]  *** Contents of shared directory: ***
[2026-02-17 05:54:38] total 928172
[2026-02-17 05:54:38] -rw-r--r-- 2 ek ek 674021421 Feb 17 04:31 ATLAS.root_0
[2026-02-17 05:54:38] -rw-r--r-- 2 ek ek    597969 Feb 17 04:31 input.tar.gz
[2026-02-17 05:54:38] -rw-r--r-- 2 ek ek     15845 Feb 17 04:31 start_atlas.sh
[2026-02-17 05:54:38] -rw------- 1 ek ek 274761795 Feb 17 05:53 HITS.pool.root.1
[2026-02-17 05:54:38] -rw------- 1 ek ek   1034240 Feb 17 05:54 result.tar.gz
05:54:39 (1838636): run_atlas exited; CPU time 18931.634736
05:54:39 (1838636): called boinc_finish(0)

</stderr_txt>
]]>

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