Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:47:15 (639808): wrapper (7.7.26015): starting
13:47:15 (639808): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 13:47:15] Arguments: --nthreads 4
[2026-02-15 13:47:15] Threads: 4
[2026-02-15 13:47:15] Checking for CVMFS
[2026-02-15 13:47:15] No cvmfs_config command found, will try listing directly
[2026-02-15 13:47:15] CVMFS is ok
[2026-02-15 13:47:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 13:47:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 13:47:15] Further information can be found at the LHC@home message board.
[2026-02-15 13:47:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 13:47:15] Checking for apptainer binary...
[2026-02-15 13:47:15] which: no apptainer in ((null))
[2026-02-15 13:47:15] apptainer is not installed, using version from CVMFS
[2026-02-15 13:47:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 13:47:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-02-15 13:47:15] apptainer works
[2026-02-15 13:47:15] Set ATHENA_PROC_NUMBER=4
[2026-02-15 13:47:15] Set ATHENA_CORE_NUMBER=4
[2026-02-15 13:47:15] Starting ATLAS job with PandaID=7011032407
[2026-02-15 13:47:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 17:18:07]  *** The last 200 lines of the pilot log: ***
[2026-02-15 17:18:07] 2026-02-15 16:17:04,940 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 17:18:07] 2026-02-15 16:17:04,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 17:18:07] 2026-02-15 16:17:04,940 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 17:18:07] 2026-02-15 16:17:04,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 17:18:07] 2026-02-15 16:17:04,944 | INFO     | fitting pss+swap vs Time
[2026-02-15 17:18:07] 2026-02-15 16:17:04,945 | INFO     | sum of square deviations: 2710627567.5
[2026-02-15 17:18:07] 2026-02-15 16:17:04,946 | INFO     | sum of deviations: 18234727682.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,946 | INFO     | mean x: 1771165940.5
[2026-02-15 17:18:07] 2026-02-15 16:17:04,947 | INFO     | mean y: 2339088.0582524273
[2026-02-15 17:18:07] 2026-02-15 16:17:04,947 | INFO     | intersect: -11912513764.426403
[2026-02-15 17:18:07] 2026-02-15 16:17:04,947 | INFO     | chi2: 2.2422733902345087
[2026-02-15 17:18:07] 2026-02-15 16:17:04,948 | INFO     | sum of square deviations: 2518000700.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,949 | INFO     | sum of deviations: 31057987679.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,949 | INFO     | mean x: 1771165788.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,949 | INFO     | mean y: 2349033.736318408
[2026-02-15 17:18:07] 2026-02-15 16:17:04,949 | INFO     | intersect: -21843890016.6223
[2026-02-15 17:18:07] 2026-02-15 16:17:04,950 | INFO     | chi2: 1.4212469303756077
[2026-02-15 17:18:07] 2026-02-15 16:17:04,950 | INFO     | current chi2=1.4212469303756077 (change=36.61580534446042 %)
[2026-02-15 17:18:07] 2026-02-15 16:17:04,950 | INFO     | sum of square deviations: 2334722845.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,951 | INFO     | sum of deviations: 30309828260.499992
[2026-02-15 17:18:07] 2026-02-15 16:17:04,952 | INFO     | mean x: 1771165635.5
[2026-02-15 17:18:07] 2026-02-15 16:17:04,952 | INFO     | mean y: 2348410.5459183673
[2026-02-15 17:18:07] 2026-02-15 16:17:04,952 | INFO     | intersect: -22991270017.38544
[2026-02-15 17:18:07] 2026-02-15 16:17:04,952 | INFO     | chi2: 1.4217081054670944
[2026-02-15 17:18:07] 2026-02-15 16:17:04,952 | INFO     | current chi2=1.4217081054670944 (change=-0.032448625332461255 %)
[2026-02-15 17:18:07] 2026-02-15 16:17:04,952 | INFO     | right removable region: 195
[2026-02-15 17:18:07] 2026-02-15 16:17:04,953 | INFO     | sum of square deviations: 2518000700.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,954 | INFO     | sum of deviations: -11231846186.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,954 | INFO     | mean x: 1771166093.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,954 | INFO     | mean y: 2362164.0099502485
[2026-02-15 17:18:07] 2026-02-15 16:17:04,955 | INFO     | intersect: 7902862400.739263
[2026-02-15 17:18:07] 2026-02-15 16:17:04,955 | INFO     | chi2: 0.8486240191614718
[2026-02-15 17:18:07] 2026-02-15 16:17:04,955 | INFO     | current chi2=0.8486240191614718 (change=62.153409889383816 %)
[2026-02-15 17:18:07] 2026-02-15 16:17:04,955 | INFO     | sum of square deviations: 2334722845.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,957 | INFO     | sum of deviations: -13006959941.5
[2026-02-15 17:18:07] 2026-02-15 16:17:04,957 | INFO     | mean x: 1771166245.5
[2026-02-15 17:18:07] 2026-02-15 16:17:04,957 | INFO     | mean y: 2363625.7704081633
[2026-02-15 17:18:07] 2026-02-15 16:17:04,957 | INFO     | intersect: 9869696895.880873
[2026-02-15 17:18:07] 2026-02-15 16:17:04,957 | INFO     | chi2: 0.8422815865058036
[2026-02-15 17:18:07] 2026-02-15 16:17:04,958 | INFO     | current chi2=0.8422815865058036 (change=0.747378404624361 %)
[2026-02-15 17:18:07] 2026-02-15 16:17:04,958 | INFO     | left removable region: 20
[2026-02-15 17:18:07] 2026-02-15 16:17:04,958 | INFO     | sum of square deviations: 1661798600.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,959 | INFO     | sum of deviations: -918599549.0000013
[2026-02-15 17:18:07] 2026-02-15 16:17:04,959 | INFO     | mean x: 1771166215.0
[2026-02-15 17:18:07] 2026-02-15 16:17:04,960 | INFO     | mean y: 2375640.725714286
[2026-02-15 17:18:07] 2026-02-15 16:17:04,960 | INFO     | intersect: 981430795.9671733
[2026-02-15 17:18:07] 2026-02-15 16:17:04,960 | INFO     | chi2: 0.00046022549201664724
[2026-02-15 17:18:07] 2026-02-15 16:17:04,960 | INFO     | current memory leak: -0.55 B/s (using 175 data points, chi2=0.00)
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | could have reported an average CPU frequency of 2416 MHz (10 samples)
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | ..............................
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . Timing measurements:
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . get job = 0 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . initial setup = 8 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . payload setup = 7 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . stage-in = 0 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . payload execution = 12537 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,961 | INFO     | . stage-out = 1 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,962 | INFO     | . log creation = 0 s
[2026-02-15 17:18:07] 2026-02-15 16:17:04,962 | INFO     | ..............................
[2026-02-15 17:18:07] 2026-02-15 16:17:05,062 | INFO     | 
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | job summary report
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | --------------------------------------------------
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | PanDA job id: 7011032407
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | task id: 48318018
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | errors: (none)
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | pilot state: finished 
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | transexitcode: 0
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | exeerrorcode: 0
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | exeerrordiag: 
[2026-02-15 17:18:07] 2026-02-15 16:17:05,063 | INFO     | exitcode: 0
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | exitmsg: OK
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | cpuconsumptiontime: 47614 s
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | nevents: 400
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | neventsw: 0
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | pid: 648577
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | pgrp: 648577
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | corecount: 4
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | event service: False
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | sizes: {0: 2282026, 1: 2282260, 11: 2282260, 12549: 2312006, 12551: 2321082, 12554: 2321220}
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | --------------------------------------------------
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | 
[2026-02-15 17:18:07] 2026-02-15 16:17:05,064 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-02-15 17:18:07] 2026-02-15 16:17:05,086 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,088 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 17:18:07] 2026-02-15 16:17:05,089 | INFO     | job 7011032407 has completed (purged errors)
[2026-02-15 17:18:07] 2026-02-15 16:17:05,089 | INFO     | overall cleanup function is called
[2026-02-15 17:18:07] 2026-02-15 16:17:05,548 | WARNING  | process 648577 can no longer be monitored (due to stat problems) - aborting
[2026-02-15 17:18:07] 2026-02-15 16:17:05,815 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 17:18:07] 2026-02-15 16:17:06,096 | INFO     | --- collectZombieJob: --- 10, [648577]
[2026-02-15 17:18:07] 2026-02-15 16:17:06,096 | INFO     | zombie collector waiting for pid 648577
[2026-02-15 17:18:07] 2026-02-15 16:17:06,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 17:18:07] 2026-02-15 16:17:06,097 | INFO     | collected zombie processes
[2026-02-15 17:18:07] 2026-02-15 16:17:06,097 | INFO     | will attempt to kill all subprocesses of pid=648577
[2026-02-15 17:18:07] 2026-02-15 16:17:06,331 | INFO     | number of running child processes to parent process 648577: 1
[2026-02-15 17:18:07] 2026-02-15 16:17:06,332 | INFO     | maximum number of monitored processes: 6
[2026-02-15 17:18:07] 2026-02-15 16:17:06,332 | INFO     | aborting job monitoring since job object (job id=7011032407) has expired
[2026-02-15 17:18:07] 2026-02-15 16:17:06,584 | INFO     | process IDs to be killed: [648577] (in reverse order)
[2026-02-15 17:18:07] 2026-02-15 16:17:06,697 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 17:18:07] 2026-02-15 16:17:06,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 17:18:07] 2026-02-15 16:17:06,709 | INFO     | did not find any defunct processes belonging to 648577
[2026-02-15 17:18:07] 2026-02-15 16:17:06,720 | INFO     | did not find any defunct processes belonging to 648577
[2026-02-15 17:18:07] 2026-02-15 16:17:06,720 | INFO     | ready for new job
[2026-02-15 17:18:07] 2026-02-15 16:17:06,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 17:18:07] 2026-02-15 16:17:06,722 | INFO     | **************************************
[2026-02-15 17:18:07] 2026-02-15 16:17:06,723 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 17:18:07] 2026-02-15 16:17:06,723 | INFO     | **************************************
[2026-02-15 17:18:07] 2026-02-15 16:17:06,723 | INFO     | 
[2026-02-15 17:18:07] 2026-02-15 16:17:06,727 | INFO     | architecture information:
[2026-02-15 17:18:07] 2026-02-15 16:17:06,727 | INFO     | executing command: cat /etc/os-release
[2026-02-15 17:18:07] 2026-02-15 16:17:06,743 | INFO     | cat /etc/os-release:
[2026-02-15 17:18:07] NAME="CentOS Linux"
[2026-02-15 17:18:07] VERSION="7 (Core)"
[2026-02-15 17:18:07] ID="centos"
[2026-02-15 17:18:07] ID_LIKE="rhel fedora"
[2026-02-15 17:18:07] VERSION_ID="7"
[2026-02-15 17:18:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 17:18:07] ANSI_COLOR="0;31"
[2026-02-15 17:18:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 17:18:07] HOME_URL="https://www.centos.org/"
[2026-02-15 17:18:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 17:18:07] 
[2026-02-15 17:18:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 17:18:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 17:18:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 17:18:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 17:18:07] 
[2026-02-15 17:18:07] 2026-02-15 16:17:06,744 | INFO     | **************************************
[2026-02-15 17:18:07] 2026-02-15 16:17:07,246 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-02-15 17:18:07] 2026-02-15 16:17:07,265 | INFO     | sufficient remaining disk space (628450394112 B)
[2026-02-15 17:18:07] 2026-02-15 16:17:07,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 17:18:07] 2026-02-15 16:17:07,266 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 17:18:07] 2026-02-15 16:17:07,266 | INFO     | update_server=False
[2026-02-15 17:18:07] 2026-02-15 16:17:07,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 17:18:07] 2026-02-15 16:17:07,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 17:18:07] 2026-02-15 16:17:07,267 | INFO     | will abort loop
[2026-02-15 17:18:07] 2026-02-15 16:17:07,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 17:18:07] 2026-02-15 16:17:08,174 | INFO     | all job control threads have been joined
[2026-02-15 17:18:07] 2026-02-15 16:17:08,196 | INFO     | all data control threads have been joined
[2026-02-15 17:18:07] 2026-02-15 16:17:08,203 | INFO     | all payload control threads have been joined
[2026-02-15 17:18:07] 2026-02-15 16:17:08,271 | INFO     | [job] retrieve thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:08,272 | INFO     | [job] job monitor thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:08,380 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:08,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 17:18:07] 2026-02-15 16:17:08,719 | INFO     | [job] validate thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:08,841 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:08,967 | INFO     | [payload] validate_post thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,127 | INFO     | [payload] failed_post thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,137 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,179 | INFO     | [job] control thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,201 | INFO     | [data] control thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,208 | INFO     | [payload] control thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,456 | INFO     | [data] copytool_in thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:09,983 | INFO     | [data] copytool_out thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:10,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 17:18:07] 2026-02-15 16:17:11,078 | INFO     | [job] queue monitor thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:12,570 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 17:18:07] 2026-02-15 16:17:31,267 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-02-15 17:18:07] 2026-02-15 16:17:36,792 | INFO     | PID=643875 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-15 17:18:07] 2026-02-15 16:17:36,792 | INFO     | .. there are 13 such processes running
[2026-02-15 17:18:07] 2026-02-15 16:17:36,792 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 17:18:07] 2026-02-15 16:17:36,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 17:18:07] 2026-02-15 16:17:36,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 17:18:07] 2026-02-15 16:18:00,496 | INFO     | [monitor] cgroup control has ended
[2026-02-15 17:18:07] 2026-02-15 16:18:02,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22539919218496)>', '<ExcThread(monitor, started 22539677210368)>']
[2026-02-15 17:18:07] 2026-02-15 16:18:02,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 17:18:07] 2026-02-15 16:18:02,922 | INFO     | [monitor] control thread has ended
[2026-02-15 17:18:07] 2026-02-15 16:18:07,450 | INFO     | all workflow threads have been joined
[2026-02-15 17:18:07] 2026-02-15 16:18:07,450 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 17:18:07] 2026-02-15 16:18:07,450 | INFO     | traces error code: 0
[2026-02-15 17:18:07] 2026-02-15 16:18:07,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 17:18:07] 2026-02-15 16:18:07,584 [wrapper] ==== pilot stdout END ====
[2026-02-15 17:18:07] 2026-02-15 16:18:07,587 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 17:18:07] 2026-02-15 16:18:07,589 [wrapper] pilotpid: 643875
[2026-02-15 17:18:07] 2026-02-15 16:18:07,592 [wrapper] Pilot exit status: 0
[2026-02-15 17:18:07] 2026-02-15 16:18:07,603 [wrapper] pandaids: 7011032407
[2026-02-15 17:18:07] 2026-02-15 16:18:07,677 [wrapper] cleanup supervisor_pilot  886280 643876
[2026-02-15 17:18:07] 2026-02-15 16:18:07,680 [wrapper] Test setup, not cleaning
[2026-02-15 17:18:07] 2026-02-15 16:18:07,683 [wrapper] apfmon messages muted
[2026-02-15 17:18:07] 2026-02-15 16:18:07,686 [wrapper] ==== wrapper stdout END ====
[2026-02-15 17:18:07] 2026-02-15 16:18:07,688 [wrapper] ==== wrapper stderr END ====
[2026-02-15 17:18:07]  *** Error codes and diagnostics ***
[2026-02-15 17:18:07]     "exeErrorCode": 0,
[2026-02-15 17:18:07]     "exeErrorDiag": "",
[2026-02-15 17:18:07]     "pilotErrorCode": 0,
[2026-02-15 17:18:07]     "pilotErrorDiag": "",
[2026-02-15 17:18:07]  *** Listing of results directory ***
[2026-02-15 17:18:07] total 677012
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc    584627 Feb 15 06:05 pilot3.tar.gz
[2026-02-15 17:18:07] -rwx------ 1 boinc boinc     36322 Feb 15 06:08 runpilot2-wrapper.sh
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc      5111 Feb 15 06:10 queuedata.json
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc       100 Feb 15 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 17:18:07] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 13:47 run_atlas
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc       105 Feb 15 13:47 job.xml
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc      6634 Feb 15 13:47 init_data.xml
[2026-02-15 17:18:07] -rw-r--r-- 2 boinc boinc 499484939 Feb 15 13:47 EVNT.48318016._000265.pool.root.1
[2026-02-15 17:18:07] -rw-r--r-- 2 boinc boinc     15845 Feb 15 13:47 start_atlas.sh
[2026-02-15 17:18:07] drwxrwx--x 2 boinc boinc      4096 Feb 15 13:47 shared
[2026-02-15 17:18:07] -rw-r--r-- 2 boinc boinc    597951 Feb 15 13:47 input.tar.gz
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc         0 Feb 15 13:47 boinc_lockfile
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc      2524 Feb 15 13:47 pandaJob.out
[2026-02-15 17:18:07] -rw------- 1 boinc boinc   1000992 Feb 15 13:47 agis_schedconf.cvmfs.json
[2026-02-15 17:18:07] -rw------- 1 boinc boinc       448 Feb 15 13:47 workernode_map.json
[2026-02-15 17:18:07] drwx------ 5 boinc boinc      4096 Feb 15 13:47 pilot3
[2026-02-15 17:18:07] -rw------- 1 boinc boinc 185501527 Feb 15 17:16 HITS.48318018._013692.pool.root.1
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc       531 Feb 15 17:16 boinc_task_state.xml
[2026-02-15 17:18:07] -rw------- 1 boinc boinc        95 Feb 15 17:16 pilot_heartbeat.json
[2026-02-15 17:18:07] -rw------- 1 boinc boinc      1034 Feb 15 17:16 memory_monitor_summary.json
[2026-02-15 17:18:07] -rw------- 1 boinc boinc   1513015 Feb 15 17:17 agis_ddmendpoints.agis.ALL.json
[2026-02-15 17:18:07] -rw------- 1 boinc boinc    396376 Feb 15 17:17 log.48318018._013692.job.log.tgz.1
[2026-02-15 17:18:07] -rw------- 1 boinc boinc      6401 Feb 15 17:17 heartbeat.json
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc      8192 Feb 15 17:17 boinc_mmap_file
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc        28 Feb 15 17:17 wrapper_checkpoint.txt
[2026-02-15 17:18:07] -rw------- 1 boinc boinc      4831 Feb 15 17:18 pilotlog.txt
[2026-02-15 17:18:07] -rw------- 1 boinc boinc   1772713 Feb 15 17:18 log.48318018._013692.job.log.1
[2026-02-15 17:18:07] -rw------- 1 boinc boinc       357 Feb 15 17:18 output.list
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc       620 Feb 15 17:18 runtime_log
[2026-02-15 17:18:07] -rw------- 1 boinc boinc   2191360 Feb 15 17:18 result.tar.gz
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc      9205 Feb 15 17:18 runtime_log.err
[2026-02-15 17:18:07] -rw------- 1 boinc boinc       662 Feb 15 17:18 JxfMDmmXjB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmc8oKDmeRPJ0m.diag
[2026-02-15 17:18:07] -rw-r--r-- 1 boinc boinc     20840 Feb 15 17:18 stderr.txt
[2026-02-15 17:18:07] HITS file was successfully produced:
[2026-02-15 17:18:07] -rw------- 1 boinc boinc 185501527 Feb 15 17:16 shared/HITS.pool.root.1
[2026-02-15 17:18:07]  *** Contents of shared directory: ***
[2026-02-15 17:18:07] total 671684
[2026-02-15 17:18:07] -rw-r--r-- 2 boinc boinc 499484939 Feb 15 13:47 ATLAS.root_0
[2026-02-15 17:18:07] -rw-r--r-- 2 boinc boinc     15845 Feb 15 13:47 start_atlas.sh
[2026-02-15 17:18:07] -rw-r--r-- 2 boinc boinc    597951 Feb 15 13:47 input.tar.gz
[2026-02-15 17:18:07] -rw------- 1 boinc boinc 185501527 Feb 15 17:16 HITS.pool.root.1
[2026-02-15 17:18:07] -rw------- 1 boinc boinc   2191360 Feb 15 17:18 result.tar.gz
17:18:09 (639808): run_atlas exited; CPU time 48055.232001
17:18:09 (639808): called boinc_finish(0)

</stderr_txt>
]]>

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