Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:09:40 (696995): wrapper (7.7.26015): starting
03:09:40 (696995): wrapper: running run_atlas (--nthreads 8)
[2026-02-15 03:09:40] Arguments: --nthreads 8
[2026-02-15 03:09:40] Threads: 8
[2026-02-15 03:09:40] Checking for CVMFS
[2026-02-15 03:09:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-15 03:09:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-15 03:09:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-15 03:09:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-15 03:09:40] 2.13.3.0 149664 394 50740 156264 3 42 8552658 20480001 998 130560 0 758582 99.994 17528 143 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-02-15 03:09:40] CVMFS is ok
[2026-02-15 03:09:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 03:09:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 03:09:40] Further information can be found at the LHC@home message board.
[2026-02-15 03:09:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 03:09:40] Checking for apptainer binary...
[2026-02-15 03:09:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-15 03:09:40] Running /usr/bin/apptainer --version
[2026-02-15 03:09:40] apptainer version 1.4.5
[2026-02-15 03:09:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 03:09:40] jonny-linux
[2026-02-15 03:09:40] apptainer works
[2026-02-15 03:09:40] Set ATHENA_PROC_NUMBER=8
[2026-02-15 03:09:40] Set ATHENA_CORE_NUMBER=8
[2026-02-15 03:09:40] Starting ATLAS job with PandaID=7011032133
[2026-02-15 03:09:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/radeon2/boinc3/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 04:04:04]  *** The last 200 lines of the pilot log: ***
[2026-02-15 04:04:04]  guid=4ac94673-63c3-485e-a5ae-ec749aab3224
[2026-02-15 04:04:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-15 04:04:04]  is_altstaged=None
[2026-02-15 04:04:04]  is_tar=False
[2026-02-15 04:04:04]  lfn=log.48318018._013441.job.log.tgz.1
[2026-02-15 04:04:04]  mtime=0
[2026-02-15 04:04:04]  protocol_id=None
[2026-02-15 04:04:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-15 04:04:04]  replicas=None
[2026-02-15 04:04:04]  scope=mc23_13p6TeV
[2026-02-15 04:04:04]  status=None
[2026-02-15 04:04:04]  status_code=0
[2026-02-15 04:04:04]  storage_token=
[2026-02-15 04:04:04]  surl=/home/radeon2/boinc3/slots/2/PanDA_Pilot-7011032133/log.48318018._013441.job.log.tgz.1
[2026-02-15 04:04:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/0d/log.48318018._013441.job.log.tgz.1
[2026-02-15 04:04:04]  workdir=None
[2026-02-15 04:04:04] ]
[2026-02-15 04:04:04] 2026-02-15 11:02:59,031 | INFO     | transferring file log.48318018._013441.job.log.tgz.1 from /home/radeon2/boinc3/slots/2/PanDA_Pilot-7011032133/log.48318018._013441.job.log.tgz.1 to /home/radeon2/b
[2026-02-15 04:04:04] 2026-02-15 11:02:59,031 | INFO     | executing command: /usr/bin/env mv /home/radeon2/boinc3/slots/2/PanDA_Pilot-7011032133/log.48318018._013441.job.log.tgz.1 /home/radeon2/boinc3/slots/2/log.48318018
[2026-02-15 04:04:04] 2026-02-15 11:02:59,042 | INFO     | adding to output.list: log.48318018._013441.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/0d/log.48318018._013441.job.log.tg
[2026-02-15 04:04:04] 2026-02-15 11:02:59,042 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-15 04:04:04] 2026-02-15 11:02:59,042 | INFO     | summary of transferred files:
[2026-02-15 04:04:04] 2026-02-15 11:02:59,042 | INFO     |  -- lfn=log.48318018._013441.job.log.tgz.1, status_code=0, status=transferred
[2026-02-15 04:04:04] 2026-02-15 11:02:59,042 | INFO     | stage-out finished correctly
[2026-02-15 04:04:04] 2026-02-15 11:02:59,178 | WARNING  | process 711068 can no longer be monitored (due to stat problems) - aborting
[2026-02-15 04:04:04] 2026-02-15 11:02:59,178 | INFO     | using path: /home/radeon2/boinc3/slots/2/PanDA_Pilot-7011032133/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 04:04:04] 2026-02-15 11:02:59,183 | INFO     | time since job start (3185s) is within the limit (349056.0s)
[2026-02-15 04:04:04] 2026-02-15 11:02:59,264 | INFO     | number of running child processes to parent process 711068: 1
[2026-02-15 04:04:04] 2026-02-15 11:02:59,264 | INFO     | maximum number of monitored processes: 6
[2026-02-15 04:04:04] 2026-02-15 11:02:59,509 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-15 04:04:04] 2026-02-15 11:03:00,185 | INFO     | job 7011032133 has state=finished
[2026-02-15 04:04:04] 2026-02-15 11:03:00,185 | INFO     | preparing for final server update for job 7011032133 in state='finished'
[2026-02-15 04:04:04] 2026-02-15 11:03:00,185 | INFO     | reading metadata from: /home/radeon2/boinc3/slots/2/PanDA_Pilot-7011032133/jobReport.json
[2026-02-15 04:04:04] 2026-02-15 11:03:00,186 | INFO     | added worker_node to metadata from /home/radeon2/boinc3/slots/2/workernode_map.json
[2026-02-15 04:04:04] 2026-02-15 11:03:00,187 | INFO     | this job has now completed (state=finished)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,187 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,187 | INFO     | log transfer has been attempted: DONE
[2026-02-15 04:04:04] 2026-02-15 11:03:00,187 | INFO     | job 7011032133 has finished - writing final server update
[2026-02-15 04:04:04] 2026-02-15 11:03:00,187 | INFO     | total number of processed events: 400 (read)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,190 | INFO     | using path: /home/radeon2/boinc3/slots/2/PanDA_Pilot-7011032133/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,190 | INFO     | extracted standard info from prmon json
[2026-02-15 04:04:04] 2026-02-15 11:03:00,190 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 04:04:04] 2026-02-15 11:03:00,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 04:04:04] 2026-02-15 11:03:00,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | fitting pss+swap vs Time
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | sum of square deviations: 28242390.0
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | sum of deviations: 411438717.00000006
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | mean x: 1771151857.0
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | mean y: 2510860.4444444445
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | intersect: -25799853870.59452
[2026-02-15 04:04:04] 2026-02-15 11:03:00,191 | INFO     | chi2: 0.0003438240641280812
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | current memory leak: 14.57 B/s (using 45 data points, chi2=0.00)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | could have reported an average CPU frequency of 3333 MHz (5 samples)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | ..............................
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . Timing measurements:
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . get job = 0 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . initial setup = 5 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . payload setup = 2 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . stage-in = 0 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . payload execution = 3167 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . stage-out = 0 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | . log creation = 0 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,192 | INFO     | ..............................
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | 
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | job summary report
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | --------------------------------------------------
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | PanDA job id: 7011032133
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | task id: 48318018
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | errors: (none)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | pilot state: finished 
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | transexitcode: 0
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | exeerrorcode: 0
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | exeerrordiag: 
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | exitcode: 0
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | exitmsg: OK
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | cpuconsumptiontime: 23892 s
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | nevents: 400
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | neventsw: 0
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | pid: 711068
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | pgrp: 711068
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | corecount: 8
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | event service: False
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | sizes: {0: 2282224, 11: 2282224, 3173: 2307713, 3174: 2316779, 3175: 2316949}
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | --------------------------------------------------
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | 
[2026-02-15 04:04:04] 2026-02-15 11:03:00,395 | INFO     | executing command: ls -lF /home/radeon2/boinc3/slots/2
[2026-02-15 04:04:04] 2026-02-15 11:03:00,407 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | job 7011032133 has completed (purged errors)
[2026-02-15 04:04:04] 2026-02-15 11:03:00,408 | INFO     | overall cleanup function is called
[2026-02-15 04:04:04] 2026-02-15 11:03:01,413 | INFO     | --- collectZombieJob: --- 10, [711068]
[2026-02-15 04:04:04] 2026-02-15 11:03:01,414 | INFO     | zombie collector waiting for pid 711068
[2026-02-15 04:04:04] 2026-02-15 11:03:01,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 04:04:04] 2026-02-15 11:03:01,414 | INFO     | collected zombie processes
[2026-02-15 04:04:04] 2026-02-15 11:03:01,414 | INFO     | will attempt to kill all subprocesses of pid=711068
[2026-02-15 04:04:04] 2026-02-15 11:03:01,515 | INFO     | process IDs to be killed: [711068] (in reverse order)
[2026-02-15 04:04:04] 2026-02-15 11:03:01,552 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 04:04:04] 2026-02-15 11:03:01,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 04:04:04] 2026-02-15 11:03:01,555 | INFO     | did not find any defunct processes belonging to 711068
[2026-02-15 04:04:04] 2026-02-15 11:03:01,557 | INFO     | did not find any defunct processes belonging to 711068
[2026-02-15 04:04:04] 2026-02-15 11:03:01,557 | INFO     | ready for new job
[2026-02-15 04:04:04] 2026-02-15 11:03:01,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 04:04:04] 2026-02-15 11:03:01,558 | INFO     | **************************************
[2026-02-15 04:04:04] 2026-02-15 11:03:01,558 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 04:04:04] 2026-02-15 11:03:01,558 | INFO     | **************************************
[2026-02-15 04:04:04] 2026-02-15 11:03:01,558 | INFO     | 
[2026-02-15 04:04:04] 2026-02-15 11:03:01,559 | INFO     | architecture information:
[2026-02-15 04:04:04] 2026-02-15 11:03:01,559 | INFO     | executing command: cat /etc/os-release
[2026-02-15 04:04:04] 2026-02-15 11:03:01,567 | INFO     | cat /etc/os-release:
[2026-02-15 04:04:04] NAME="CentOS Linux"
[2026-02-15 04:04:04] VERSION="7 (Core)"
[2026-02-15 04:04:04] ID="centos"
[2026-02-15 04:04:04] ID_LIKE="rhel fedora"
[2026-02-15 04:04:04] VERSION_ID="7"
[2026-02-15 04:04:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 04:04:04] ANSI_COLOR="0;31"
[2026-02-15 04:04:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 04:04:04] HOME_URL="https://www.centos.org/"
[2026-02-15 04:04:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 04:04:04] 
[2026-02-15 04:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 04:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 04:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 04:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 04:04:04] 
[2026-02-15 04:04:04] 2026-02-15 11:03:01,567 | INFO     | **************************************
[2026-02-15 04:04:04] 2026-02-15 11:03:02,068 | INFO     | executing command: df -mP /home/radeon2/boinc3/slots/2
[2026-02-15 04:04:04] 2026-02-15 11:03:02,077 | INFO     | sufficient remaining disk space (41582329856 B)
[2026-02-15 04:04:04] 2026-02-15 11:03:02,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 04:04:04] 2026-02-15 11:03:02,077 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 04:04:04] 2026-02-15 11:03:02,077 | INFO     | update_server=False
[2026-02-15 04:04:04] 2026-02-15 11:03:02,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 04:04:04] 2026-02-15 11:03:02,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 04:04:04] 2026-02-15 11:03:02,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 04:04:04] 2026-02-15 11:03:02,394 | INFO     | all payload control threads have been joined
[2026-02-15 04:04:04] 2026-02-15 11:03:02,446 | INFO     | all data control threads have been joined
[2026-02-15 04:04:04] 2026-02-15 11:03:02,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 04:04:04] 2026-02-15 11:03:02,771 | INFO     | aborting loop
[2026-02-15 04:04:04] 2026-02-15 11:03:03,078 | INFO     | [job] retrieve thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,082 | INFO     | [job] queue monitor thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,158 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,232 | INFO     | [data] copytool_in thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,395 | INFO     | [payload] control thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,451 | INFO     | [data] control thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,518 | INFO     | all job control threads have been joined
[2026-02-15 04:04:04] 2026-02-15 11:03:03,775 | INFO     | [job] job monitor thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,938 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:03,944 | INFO     | [payload] failed_post thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:04,083 | INFO     | [data] copytool_out thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:04,434 | INFO     | [job] validate thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:04,492 | INFO     | [payload] validate_post thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:04,523 | INFO     | [job] control thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:04,531 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:05,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 04:04:04] 2026-02-15 11:03:09,581 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:12,606 | INFO     | job.realtimelogging is not enabled
[2026-02-15 04:04:04] 2026-02-15 11:03:13,611 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 04:04:04] 2026-02-15 11:03:32,349 | INFO     | PID=703144 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-15 04:04:04] 2026-02-15 11:03:32,350 | INFO     | .. there are 3 such processes running
[2026-02-15 04:04:04] 2026-02-15 11:03:32,350 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 04:04:04] 2026-02-15 11:03:32,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 04:04:04] 2026-02-15 11:03:32,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 04:04:04] 2026-02-15 11:03:58,698 | INFO     | [monitor] cgroup control has ended
[2026-02-15 04:04:04] 2026-02-15 11:03:59,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129862471026496)>', '<ExcThread(monitor, started 129862111041280)>']
[2026-02-15 04:04:04] 2026-02-15 11:03:59,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 04:04:04] 2026-02-15 11:03:59,455 | INFO     | [monitor] control thread has ended
[2026-02-15 04:04:04] 2026-02-15 11:04:04,473 | INFO     | all workflow threads have been joined
[2026-02-15 04:04:04] 2026-02-15 11:04:04,473 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 04:04:04] 2026-02-15 11:04:04,474 | INFO     | traces error code: 0
[2026-02-15 04:04:04] 2026-02-15 11:04:04,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 04:04:04] 2026-02-15 11:04:04,553 [wrapper] ==== pilot stdout END ====
[2026-02-15 04:04:04] 2026-02-15 11:04:04,556 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 04:04:04] 2026-02-15 11:04:04,558 [wrapper] pilotpid: 703144
[2026-02-15 04:04:04] 2026-02-15 11:04:04,560 [wrapper] Pilot exit status: 0
[2026-02-15 04:04:04] 2026-02-15 11:04:04,567 [wrapper] pandaids: 7011032133
[2026-02-15 04:04:04] 2026-02-15 11:04:04,601 [wrapper] cleanup supervisor_pilot  725858 703145
[2026-02-15 04:04:04] 2026-02-15 11:04:04,603 [wrapper] Test setup, not cleaning
[2026-02-15 04:04:04] 2026-02-15 11:04:04,605 [wrapper] apfmon messages muted
[2026-02-15 04:04:04] 2026-02-15 11:04:04,607 [wrapper] ==== wrapper stdout END ====
[2026-02-15 04:04:04] 2026-02-15 11:04:04,609 [wrapper] ==== wrapper stderr END ====
[2026-02-15 04:04:04]  *** Error codes and diagnostics ***
[2026-02-15 04:04:04]     "exeErrorCode": 0,
[2026-02-15 04:04:04]     "exeErrorDiag": "",
[2026-02-15 04:04:04]     "pilotErrorCode": 0,
[2026-02-15 04:04:04]     "pilotErrorDiag": "",
[2026-02-15 04:04:04]  *** Listing of results directory ***
[2026-02-15 04:04:04] total 665560
[2026-02-15 04:04:04] -rw-r--r-- 1 radeon2 radeon2    584627 Feb 14 20:23 pilot3.tar.gz
[2026-02-15 04:04:04] -rwx------ 1 radeon2 radeon2     36322 Feb 14 20:27 runpilot2-wrapper.sh
[2026-02-15 04:04:04] -rw-r--r-- 1 radeon2 radeon2      5111 Feb 14 20:30 queuedata.json
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2       100 Feb 15 03:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 04:04:04] -rwxr-xr-x 1 radeon2 radeon2      7986 Feb 15 03:09 run_atlas
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2       105 Feb 15 03:09 job.xml
[2026-02-15 04:04:04] -rw-r--r-- 2 radeon2 radeon2 491692031 Feb 15 03:09 EVNT.48318016._000260.pool.root.1
[2026-02-15 04:04:04] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 15 03:09 start_atlas.sh
[2026-02-15 04:04:04] drwxrwx--x 2 radeon2 radeon2      4096 Feb 15 03:09 shared
[2026-02-15 04:04:04] -rw-r--r-- 2 radeon2 radeon2    597948 Feb 15 03:09 input.tar.gz
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2      9202 Feb 15 03:09 init_data.xml
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 15 03:09 boinc_setup_complete
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2         0 Feb 15 03:09 boinc_lockfile
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2      2522 Feb 15 03:09 pandaJob.out
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2   1000934 Feb 15 03:09 agis_schedconf.cvmfs.json
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2   1513015 Feb 15 03:09 agis_ddmendpoints.agis.ALL.json
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2       425 Feb 15 03:09 workernode_map.json
[2026-02-15 04:04:04] drwx------ 5 radeon2 radeon2      4096 Feb 15 03:09 pilot3
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2 184275067 Feb 15 04:02 HITS.48318018._013441.pool.root.1
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2      1023 Feb 15 04:02 memory_monitor_summary.json
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2    320152 Feb 15 04:02 log.48318018._013441.job.log.tgz.1
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2      6289 Feb 15 04:03 heartbeat.json
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2       530 Feb 15 04:03 boinc_task_state.xml
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2        95 Feb 15 04:03 pilot_heartbeat.json
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2      8192 Feb 15 04:03 boinc_mmap_file
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2        27 Feb 15 04:03 wrapper_checkpoint.txt
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2      4896 Feb 15 04:04 pilotlog.txt
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2    494898 Feb 15 04:04 log.48318018._013441.job.log.1
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2       357 Feb 15 04:04 output.list
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2       620 Feb 15 04:04 runtime_log
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2    829440 Feb 15 04:04 result.tar.gz
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2      8910 Feb 15 04:04 runtime_log.err
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2       652 Feb 15 04:04 nYoKDmiyhB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSzoKDmjXGVkm.diag
[2026-02-15 04:04:04] -rw-rw-r-- 1 radeon2 radeon2     21354 Feb 15 04:04 stderr.txt
[2026-02-15 04:04:04] HITS file was successfully produced:
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2 184275067 Feb 15 04:02 shared/HITS.pool.root.1
[2026-02-15 04:04:04]  *** Contents of shared directory: ***
[2026-02-15 04:04:04] total 661548
[2026-02-15 04:04:04] -rw-r--r-- 2 radeon2 radeon2 491692031 Feb 15 03:09 ATLAS.root_0
[2026-02-15 04:04:04] -rw-r--r-- 2 radeon2 radeon2     15845 Feb 15 03:09 start_atlas.sh
[2026-02-15 04:04:04] -rw-r--r-- 2 radeon2 radeon2    597948 Feb 15 03:09 input.tar.gz
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2 184275067 Feb 15 04:02 HITS.pool.root.1
[2026-02-15 04:04:04] -rw------- 1 radeon2 radeon2    829440 Feb 15 04:04 result.tar.gz
04:04:05 (696995): run_atlas exited; CPU time 23928.398665
04:04:05 (696995): called boinc_finish(0)

</stderr_txt>
]]>

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