Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
19:25:13 (1171227): wrapper (7.7.26015): starting
19:25:13 (1171227): wrapper: running run_atlas (--nthreads 4)
[2026-02-16 19:25:13] Arguments: --nthreads 4
[2026-02-16 19:25:13] Threads: 4
[2026-02-16 19:25:13] Checking for CVMFS
[2026-02-16 19:25:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 19:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 19:25:13] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 19:25:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 19:25:14] 2.13.3.0 11582 1120 48432 156292 2 49 26760771 33554432 0 130560 0 628857 99.990 33763 203 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-16 19:25:14] CVMFS is ok
[2026-02-16 19:25:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 19:25:14] Checking for apptainer binary...
[2026-02-16 19:25:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-16 19:25:14] Running /usr/bin/apptainer --version
[2026-02-16 19:25:14] apptainer version 1.4.5
[2026-02-16 19:25:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 19:25:14] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-16 19:25:14] apptainer works
[2026-02-16 19:25:14] Set ATHENA_PROC_NUMBER=4
[2026-02-16 19:25:14] Set ATHENA_CORE_NUMBER=4
[2026-02-16 19:25:14] Starting ATLAS job with PandaID=7011032943
[2026-02-16 19:25:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 20:52:38]  *** The last 200 lines of the pilot log: ***
[2026-02-16 20:52:38]  is_altstaged=None
[2026-02-16 20:52:38]  is_tar=False
[2026-02-16 20:52:38]  lfn=log.48508763._005110.job.log.tgz.1
[2026-02-16 20:52:38]  mtime=0
[2026-02-16 20:52:38]  protocol_id=None
[2026-02-16 20:52:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-16 20:52:38]  replicas=None
[2026-02-16 20:52:38]  scope=mc23_13p6TeV
[2026-02-16 20:52:38]  status=None
[2026-02-16 20:52:38]  status_code=0
[2026-02-16 20:52:38]  storage_token=
[2026-02-16 20:52:38]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7011032943/log.48508763._005110.job.log.tgz.1
[2026-02-16 20:52:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/93/log.48508763._005110.job.log.tgz.1
[2026-02-16 20:52:38]  workdir=None
[2026-02-16 20:52:38] ]
[2026-02-16 20:52:38] 2026-02-16 18:52:03,268 | INFO     | transferring file log.48508763._005110.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7011032943/log.48508763._005110.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-16 20:52:38] 2026-02-16 18:52:03,268 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7011032943/log.48508763._005110.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48508763._005110.job
[2026-02-16 20:52:38] 2026-02-16 18:52:03,276 | INFO     | adding to output.list: log.48508763._005110.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/93/log.48508763._005110.job.log.tg
[2026-02-16 20:52:38] 2026-02-16 18:52:03,277 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-16 20:52:38] 2026-02-16 18:52:03,277 | INFO     | summary of transferred files:
[2026-02-16 20:52:38] 2026-02-16 18:52:03,277 | INFO     |  -- lfn=log.48508763._005110.job.log.tgz.1, status_code=0, status=transferred
[2026-02-16 20:52:38] 2026-02-16 18:52:03,277 | INFO     | stage-out finished correctly
[2026-02-16 20:52:38] 2026-02-16 18:52:04,009 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-16 20:52:38] 2026-02-16 18:52:04,113 | INFO     | time since job start (5198s) is within the limit (349056.0s)
[2026-02-16 20:52:38] 2026-02-16 18:52:04,113 | INFO     | 5201s have passed since pilot start - server update state is 'RUNNING'
[2026-02-16 20:52:38] 2026-02-16 18:52:06,115 | INFO     | time since job start (5200s) is within the limit (349056.0s)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,355 | INFO     | job 7011032943 has state=finished
[2026-02-16 20:52:38] 2026-02-16 18:52:06,355 | INFO     | preparing for final server update for job 7011032943 in state='finished'
[2026-02-16 20:52:38] 2026-02-16 18:52:06,355 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7011032943/jobReport.json
[2026-02-16 20:52:38] 2026-02-16 18:52:06,356 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-16 20:52:38] 2026-02-16 18:52:06,356 | INFO     | this job has now completed (state=finished)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,356 | INFO     | log transfer has been attempted: DONE
[2026-02-16 20:52:38] 2026-02-16 18:52:06,356 | INFO     | job 7011032943 has finished - writing final server update
[2026-02-16 20:52:38] 2026-02-16 18:52:06,356 | INFO     | total number of processed events: 400 (read)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,358 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7011032943/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,358 | INFO     | extracted standard info from prmon json
[2026-02-16 20:52:38] 2026-02-16 18:52:06,358 | INFO     | extracted standard memory fields from prmon json
[2026-02-16 20:52:38] 2026-02-16 18:52:06,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-16 20:52:38] 2026-02-16 18:52:06,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-16 20:52:38] 2026-02-16 18:52:06,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | fitting pss+swap vs Time
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | sum of square deviations: 147126479.5
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | sum of deviations: -9881946869.000002
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | mean x: 1771265395.5
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | mean y: 2474287.871794872
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | intersect: 118971884748.27281
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | chi2: 0.1727520475166572
[2026-02-16 20:52:38] 2026-02-16 18:52:06,359 | INFO     | current memory leak: -67.17 B/s (using 78 data points, chi2=0.17)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | could have reported an average CPU frequency of 2852 MHz (6 samples)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | ..............................
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . Timing measurements:
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . get job = 0 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . initial setup = 3 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . payload setup = 2 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . stage-in = 0 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . payload execution = 5180 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . stage-out = 0 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | . log creation = 0 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,360 | INFO     | ..............................
[2026-02-16 20:52:38] 2026-02-16 18:52:06,386 | INFO     | 
[2026-02-16 20:52:38] 2026-02-16 18:52:06,386 | INFO     | job summary report
[2026-02-16 20:52:38] 2026-02-16 18:52:06,386 | INFO     | --------------------------------------------------
[2026-02-16 20:52:38] 2026-02-16 18:52:06,386 | INFO     | PanDA job id: 7011032943
[2026-02-16 20:52:38] 2026-02-16 18:52:06,386 | INFO     | task id: 48508763
[2026-02-16 20:52:38] 2026-02-16 18:52:06,386 | INFO     | errors: (none)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | pilot state: finished 
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | transexitcode: 0
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | exeerrorcode: 0
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | exeerrordiag: 
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | exitcode: 0
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | exitmsg: OK
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | cpuconsumptiontime: 19853 s
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | nevents: 400
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | neventsw: 0
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | pid: 1179732
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | pgrp: 1179732
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | corecount: 4
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | event service: False
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | sizes: {0: 2282254, 11: 2282254, 5186: 2317929, 5187: 2317929, 5189: 2318123}
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | --------------------------------------------------
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | 
[2026-02-16 20:52:38] 2026-02-16 18:52:06,387 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-16 20:52:38] 2026-02-16 18:52:06,395 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | job 7011032943 has completed (purged errors)
[2026-02-16 20:52:38] 2026-02-16 18:52:06,396 | INFO     | overall cleanup function is called
[2026-02-16 20:52:38] 2026-02-16 18:52:07,402 | INFO     | --- collectZombieJob: --- 10, [1179732]
[2026-02-16 20:52:38] 2026-02-16 18:52:07,402 | INFO     | zombie collector waiting for pid 1179732
[2026-02-16 20:52:38] 2026-02-16 18:52:07,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-16 20:52:38] 2026-02-16 18:52:07,402 | INFO     | collected zombie processes
[2026-02-16 20:52:38] 2026-02-16 18:52:07,402 | INFO     | will attempt to kill all subprocesses of pid=1179732
[2026-02-16 20:52:38] 2026-02-16 18:52:07,492 | INFO     | process IDs to be killed: [1179732] (in reverse order)
[2026-02-16 20:52:38] 2026-02-16 18:52:07,523 | WARNING  | found no corresponding commands to process id(s)
[2026-02-16 20:52:38] 2026-02-16 18:52:07,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-16 20:52:38] 2026-02-16 18:52:07,526 | INFO     | did not find any defunct processes belonging to 1179732
[2026-02-16 20:52:38] 2026-02-16 18:52:07,528 | INFO     | did not find any defunct processes belonging to 1179732
[2026-02-16 20:52:38] 2026-02-16 18:52:07,528 | INFO     | ready for new job
[2026-02-16 20:52:38] 2026-02-16 18:52:07,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-16 20:52:38] 2026-02-16 18:52:07,529 | INFO     | **************************************
[2026-02-16 20:52:38] 2026-02-16 18:52:07,529 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-16 20:52:38] 2026-02-16 18:52:07,529 | INFO     | **************************************
[2026-02-16 20:52:38] 2026-02-16 18:52:07,529 | INFO     | 
[2026-02-16 20:52:38] 2026-02-16 18:52:07,529 | INFO     | architecture information:
[2026-02-16 20:52:38] 2026-02-16 18:52:07,530 | INFO     | executing command: cat /etc/os-release
[2026-02-16 20:52:38] 2026-02-16 18:52:07,536 | INFO     | cat /etc/os-release:
[2026-02-16 20:52:38] NAME="CentOS Linux"
[2026-02-16 20:52:38] VERSION="7 (Core)"
[2026-02-16 20:52:38] ID="centos"
[2026-02-16 20:52:38] ID_LIKE="rhel fedora"
[2026-02-16 20:52:38] VERSION_ID="7"
[2026-02-16 20:52:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-16 20:52:38] ANSI_COLOR="0;31"
[2026-02-16 20:52:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-16 20:52:38] HOME_URL="https://www.centos.org/"
[2026-02-16 20:52:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-16 20:52:38] 
[2026-02-16 20:52:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-16 20:52:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-16 20:52:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-16 20:52:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-16 20:52:38] 
[2026-02-16 20:52:38] 2026-02-16 18:52:07,536 | INFO     | **************************************
[2026-02-16 20:52:38] 2026-02-16 18:52:08,038 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-16 20:52:38] 2026-02-16 18:52:08,045 | INFO     | sufficient remaining disk space (56863227904 B)
[2026-02-16 20:52:38] 2026-02-16 18:52:08,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-16 20:52:38] 2026-02-16 18:52:08,045 | INFO     | current server update state: UPDATING_FINAL
[2026-02-16 20:52:38] 2026-02-16 18:52:08,045 | INFO     | update_server=False
[2026-02-16 20:52:38] 2026-02-16 18:52:08,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-16 20:52:38] 2026-02-16 18:52:08,045 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-16 20:52:38] 2026-02-16 18:52:08,046 | INFO     | found 0 job(s) in 20 queues
[2026-02-16 20:52:38] 2026-02-16 18:52:08,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-16 20:52:38] 2026-02-16 18:52:08,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-16 20:52:38] 2026-02-16 18:52:08,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-16 20:52:38] 2026-02-16 18:52:08,197 | WARNING  | process 1179732 can no longer be monitored (due to stat problems) - aborting
[2026-02-16 20:52:38] 2026-02-16 18:52:08,254 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 20:52:38] 2026-02-16 18:52:08,338 | INFO     | number of running child processes to parent process 1179732: 1
[2026-02-16 20:52:38] 2026-02-16 18:52:08,338 | INFO     | maximum number of monitored processes: 6
[2026-02-16 20:52:38] 2026-02-16 18:52:08,338 | INFO     | aborting job monitoring since job object (job id=7011032943) has expired
[2026-02-16 20:52:38] 2026-02-16 18:52:08,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-16 20:52:38] 2026-02-16 18:52:08,339 | INFO     | will abort loop
[2026-02-16 20:52:38] 2026-02-16 18:52:08,478 | INFO     | all data control threads have been joined
[2026-02-16 20:52:38] 2026-02-16 18:52:08,578 | INFO     | all payload control threads have been joined
[2026-02-16 20:52:38] 2026-02-16 18:52:08,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-16 20:52:38] 2026-02-16 18:52:08,995 | INFO     | all job control threads have been joined
[2026-02-16 20:52:38] 2026-02-16 18:52:09,051 | INFO     | [job] retrieve thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,051 | INFO     | [job] queue monitor thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,343 | INFO     | [job] job monitor thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,397 | INFO     | [payload] failed_post thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,483 | INFO     | [data] control thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,583 | INFO     | [payload] control thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,702 | INFO     | [job] validate thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,807 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,895 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:09,989 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:10,000 | INFO     | [job] control thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:10,036 | INFO     | [data] copytool_in thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:10,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-16 20:52:38] 2026-02-16 18:52:10,418 | INFO     | [payload] validate_post thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:10,814 | INFO     | [data] copytool_out thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:14,046 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:18,980 | INFO     | job.realtimelogging is not enabled
[2026-02-16 20:52:38] 2026-02-16 18:52:19,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 20:52:38] 2026-02-16 18:52:31,933 | INFO     | [monitor] cgroup control has ended
[2026-02-16 20:52:38] 2026-02-16 18:52:32,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787454351168)>', '<ExcThread(monitor, started 139787171542784)>']
[2026-02-16 20:52:38] 2026-02-16 18:52:33,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 20:52:38] 2026-02-16 18:52:33,149 | INFO     | [monitor] control thread has ended
[2026-02-16 20:52:38] 2026-02-16 18:52:37,956 | INFO     | all workflow threads have been joined
[2026-02-16 20:52:38] 2026-02-16 18:52:37,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 20:52:38] 2026-02-16 18:52:37,956 | INFO     | traces error code: 0
[2026-02-16 20:52:38] 2026-02-16 18:52:37,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 20:52:38] 2026-02-16 18:52:38,014 [wrapper] ==== pilot stdout END ====
[2026-02-16 20:52:38] 2026-02-16 18:52:38,016 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 20:52:38] 2026-02-16 18:52:38,017 [wrapper] pilotpid: 1175064
[2026-02-16 20:52:38] 2026-02-16 18:52:38,019 [wrapper] Pilot exit status: 0
[2026-02-16 20:52:38] 2026-02-16 18:52:38,024 [wrapper] pandaids: 7011032943
[2026-02-16 20:52:38] 2026-02-16 18:52:38,044 [wrapper] cleanup supervisor_pilot 1260604 1175065
[2026-02-16 20:52:38] 2026-02-16 18:52:38,045 [wrapper] Test setup, not cleaning
[2026-02-16 20:52:38] 2026-02-16 18:52:38,047 [wrapper] apfmon messages muted
[2026-02-16 20:52:38] 2026-02-16 18:52:38,048 [wrapper] ==== wrapper stdout END ====
[2026-02-16 20:52:38] 2026-02-16 18:52:38,050 [wrapper] ==== wrapper stderr END ====
[2026-02-16 20:52:38]  *** Error codes and diagnostics ***
[2026-02-16 20:52:38]     "exeErrorCode": 0,
[2026-02-16 20:52:38]     "exeErrorDiag": "",
[2026-02-16 20:52:38]     "pilotErrorCode": 0,
[2026-02-16 20:52:38]     "pilotErrorDiag": "",
[2026-02-16 20:52:38]  *** Listing of results directory ***
[2026-02-16 20:52:38] total 941908
[2026-02-16 20:52:38] -rw-r--r-- 1 ek ek    584627 Feb 15 07:05 pilot3.tar.gz
[2026-02-16 20:52:38] -rwx------ 1 ek ek     36322 Feb 15 07:06 runpilot2-wrapper.sh
[2026-02-16 20:52:38] -rw-r--r-- 1 ek ek      5111 Feb 15 07:08 queuedata.json
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek       100 Feb 16 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 20:52:38] -rwxr-xr-x 1 ek ek      7986 Feb 16 19:25 run_atlas
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek       105 Feb 16 19:25 job.xml
[2026-02-16 20:52:38] -rw-r--r-- 2 ek ek 675789553 Feb 16 19:25 EVNT.48508760._000100.pool.root.1
[2026-02-16 20:52:38] -rw-r--r-- 2 ek ek    597946 Feb 16 19:25 input.tar.gz
[2026-02-16 20:52:38] -rw-r--r-- 2 ek ek     15845 Feb 16 19:25 start_atlas.sh
[2026-02-16 20:52:38] drwxrwx--x 2 ek ek      4096 Feb 16 19:25 shared
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek         0 Feb 16 19:25 boinc_setup_complete
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek      9840 Feb 16 19:25 init_data.xml
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek         0 Feb 16 19:25 boinc_lockfile
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek      2548 Feb 16 19:25 pandaJob.out
[2026-02-16 20:52:38] -rw------- 1 ek ek        50 Feb 16 19:25 setup.sh.local
[2026-02-16 20:52:38] -rw------- 1 ek ek   1001145 Feb 16 19:25 agis_schedconf.cvmfs.json
[2026-02-16 20:52:38] -rw------- 1 ek ek   1513015 Feb 16 19:25 agis_ddmendpoints.agis.ALL.json
[2026-02-16 20:52:38] -rw------- 1 ek ek       433 Feb 16 19:25 workernode_map.json
[2026-02-16 20:52:38] drwx------ 5 ek ek      4096 Feb 16 19:25 pilot3
[2026-02-16 20:52:38] -rw------- 1 ek ek 282729081 Feb 16 20:51 HITS.48508763._005110.pool.root.1
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek       530 Feb 16 20:51 boinc_task_state.xml
[2026-02-16 20:52:38] -rw------- 1 ek ek      1046 Feb 16 20:52 memory_monitor_summary.json
[2026-02-16 20:52:38] -rw------- 1 ek ek        95 Feb 16 20:52 pilot_heartbeat.json
[2026-02-16 20:52:38] -rw------- 1 ek ek    271165 Feb 16 20:52 log.48508763._005110.job.log.tgz.1
[2026-02-16 20:52:38] -rw------- 1 ek ek      6371 Feb 16 20:52 heartbeat.json
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek        27 Feb 16 20:52 wrapper_checkpoint.txt
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek      8192 Feb 16 20:52 boinc_mmap_file
[2026-02-16 20:52:38] -rw------- 1 ek ek      5141 Feb 16 20:52 pilotlog.txt
[2026-02-16 20:52:38] -rw------- 1 ek ek    756430 Feb 16 20:52 log.48508763._005110.job.log.1
[2026-02-16 20:52:38] -rw------- 1 ek ek       357 Feb 16 20:52 output.list
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek       620 Feb 16 20:52 runtime_log
[2026-02-16 20:52:38] -rw------- 1 ek ek   1044480 Feb 16 20:52 result.tar.gz
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek      9501 Feb 16 20:52 runtime_log.err
[2026-02-16 20:52:38] -rw------- 1 ek ek       669 Feb 16 20:52 MxzLDmTWjB9n9Rq4apOajLDm4fhM0noT9bVooX4SDm45nKDmMxwUJo.diag
[2026-02-16 20:52:38] -rw-rw-r-- 1 ek ek     21232 Feb 16 20:52 stderr.txt
[2026-02-16 20:52:38] HITS file was successfully produced:
[2026-02-16 20:52:38] -rw------- 1 ek ek 282729081 Feb 16 20:51 shared/HITS.pool.root.1
[2026-02-16 20:52:38]  *** Contents of shared directory: ***
[2026-02-16 20:52:38] total 937684
[2026-02-16 20:52:38] -rw-r--r-- 2 ek ek 675789553 Feb 16 19:25 ATLAS.root_0
[2026-02-16 20:52:38] -rw-r--r-- 2 ek ek    597946 Feb 16 19:25 input.tar.gz
[2026-02-16 20:52:38] -rw-r--r-- 2 ek ek     15845 Feb 16 19:25 start_atlas.sh
[2026-02-16 20:52:38] -rw------- 1 ek ek 282729081 Feb 16 20:51 HITS.pool.root.1
[2026-02-16 20:52:38] -rw------- 1 ek ek   1044480 Feb 16 20:52 result.tar.gz
20:52:40 (1171227): run_atlas exited; CPU time 19896.321920
20:52:40 (1171227): called boinc_finish(0)

</stderr_txt>
]]>

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