Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:53:18 (1591610): wrapper (7.7.26015): starting
15:53:18 (1591610): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 15:53:18] Arguments: --nthreads 4
[2026-02-15 15:53:18] Threads: 4
[2026-02-15 15:53:18] Checking for CVMFS
[2026-02-15 15:53:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-15 15:53:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-15 15:53:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-15 15:53:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-15 15:53:19] 2.9.2.0 1407057 946 81016 156267 2 188 25377912 36864000 0 130560 0 517122 99.988 30068 17552 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-15 15:53:19] CVMFS is ok
[2026-02-15 15:53:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 15:53:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 15:53:19] Further information can be found at the LHC@home message board.
[2026-02-15 15:53:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 15:53:19] Checking for apptainer binary...
[2026-02-15 15:53:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-15 15:53:19] Running /usr/bin/apptainer --version
[2026-02-15 15:53:19] apptainer version 1.4.1-1.1
[2026-02-15 15:53:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 15:53:19] magicA244a
[2026-02-15 15:53:19] apptainer works
[2026-02-15 15:53:19] Set ATHENA_PROC_NUMBER=4
[2026-02-15 15:53:19] Set ATHENA_CORE_NUMBER=4
[2026-02-15 15:53:19] Starting ATLAS job with PandaID=7010781841
[2026-02-15 15:53:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 16:56:44]  *** The last 200 lines of the pilot log: ***
[2026-02-15 16:56:44] 2026-02-15 15:56:13,849 | INFO     | --- collectZombieJob: --- 10, [1600216]
[2026-02-15 16:56:44] 2026-02-15 15:56:13,849 | INFO     | zombie collector waiting for pid 1600216
[2026-02-15 16:56:44] 2026-02-15 15:56:13,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 16:56:44] 2026-02-15 15:56:13,849 | INFO     | collected zombie processes
[2026-02-15 16:56:44] 2026-02-15 15:56:13,849 | INFO     | will attempt to kill all subprocesses of pid=1600216
[2026-02-15 16:56:44] 2026-02-15 15:56:13,894 | INFO     | process IDs to be killed: [1600216] (in reverse order)
[2026-02-15 16:56:44] 2026-02-15 15:56:13,921 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 16:56:44] 2026-02-15 15:56:13,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 16:56:44] 2026-02-15 15:56:13,922 | INFO     | did not find any defunct processes belonging to 1600216
[2026-02-15 16:56:44] 2026-02-15 15:56:13,923 | INFO     | did not find any defunct processes belonging to 1600216
[2026-02-15 16:56:44] 2026-02-15 15:56:13,924 | INFO     | ready for new job
[2026-02-15 16:56:44] 2026-02-15 15:56:13,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 16:56:44] 2026-02-15 15:56:13,924 | INFO     | **************************************
[2026-02-15 16:56:44] 2026-02-15 15:56:13,924 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 16:56:44] 2026-02-15 15:56:13,924 | INFO     | **************************************
[2026-02-15 16:56:44] 2026-02-15 15:56:13,924 | INFO     | 
[2026-02-15 16:56:44] 2026-02-15 15:56:13,925 | INFO     | architecture information:
[2026-02-15 16:56:44] 2026-02-15 15:56:13,925 | INFO     | executing command: cat /etc/os-release
[2026-02-15 16:56:44] 2026-02-15 15:56:13,935 | INFO     | cat /etc/os-release:
[2026-02-15 16:56:44] NAME="CentOS Linux"
[2026-02-15 16:56:44] VERSION="7 (Core)"
[2026-02-15 16:56:44] ID="centos"
[2026-02-15 16:56:44] ID_LIKE="rhel fedora"
[2026-02-15 16:56:44] VERSION_ID="7"
[2026-02-15 16:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 16:56:44] ANSI_COLOR="0;31"
[2026-02-15 16:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 16:56:44] HOME_URL="https://www.centos.org/"
[2026-02-15 16:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 16:56:44] 
[2026-02-15 16:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 16:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 16:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 16:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 16:56:44] 
[2026-02-15 16:56:44] 2026-02-15 15:56:13,935 | INFO     | **************************************
[2026-02-15 16:56:44] 2026-02-15 15:56:14,438 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-15 16:56:44] 2026-02-15 15:56:14,451 | INFO     | sufficient remaining disk space (330090676224 B)
[2026-02-15 16:56:44] 2026-02-15 15:56:14,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 16:56:44] 2026-02-15 15:56:14,452 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 16:56:44] 2026-02-15 15:56:14,452 | INFO     | update_server=False
[2026-02-15 16:56:44] 2026-02-15 15:56:14,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 16:56:44] 2026-02-15 15:56:14,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 16:56:44] 2026-02-15 15:56:14,780 | INFO     | all job control threads have been joined
[2026-02-15 16:56:44] 2026-02-15 15:56:15,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 16:56:44] 2026-02-15 15:56:15,045 | INFO     | aborting loop
[2026-02-15 16:56:44] 2026-02-15 15:56:15,382 | INFO     | all payload control threads have been joined
[2026-02-15 16:56:44] 2026-02-15 15:56:15,458 | INFO     | [job] queue monitor thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:15,458 | INFO     | [job] retrieve thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:15,483 | INFO     | all data control threads have been joined
[2026-02-15 16:56:44] 2026-02-15 15:56:15,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 16:56:44] 2026-02-15 15:56:15,678 | INFO     | [payload] validate_post thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:15,786 | INFO     | [job] control thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:15,913 | INFO     | [payload] failed_post thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,051 | INFO     | [job] job monitor thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,325 | INFO     | [job] validate thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,383 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,385 | INFO     | [payload] control thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,456 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,488 | INFO     | [data] control thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,557 | INFO     | [data] copytool_in thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:16,753 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:17,529 | INFO     | [data] copytool_out thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:17,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 16:56:44] 2026-02-15 15:56:21,647 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:25,129 | INFO     | job.realtimelogging is not enabled
[2026-02-15 16:56:44] 2026-02-15 15:56:26,134 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 16:56:44] 2026-02-15 15:56:34,946 | INFO     | [monitor] cgroup control has ended
[2026-02-15 16:56:44] 2026-02-15 15:56:36,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444982953792)>', '<ExcThread(monitor, started 140444340049664)>']
[2026-02-15 16:56:44] 2026-02-15 15:56:41,179 | INFO     | all workflow threads have been joined
[2026-02-15 16:56:44] 2026-02-15 15:56:41,179 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 16:56:44] 2026-02-15 15:56:41,179 | INFO     | traces error code: 0
[2026-02-15 16:56:44] 2026-02-15 15:56:41,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 16:56:44] 2026-02-15 15:56:44,707 | INFO     | PID=1595717 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-15 16:56:44] 2026-02-15 15:56:44,707 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 16:56:44] 2026-02-15 15:56:44,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 16:56:44] 2026-02-15 15:56:44,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 16:56:44] 2026-02-15 15:56:44,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 16:56:44] 2026-02-15 15:56:44,707 | INFO     | [monitor] control thread has ended
[2026-02-15 16:56:44] 2026-02-15 15:56:44,754 [wrapper] ==== pilot stdout END ====
[2026-02-15 16:56:44] 2026-02-15 15:56:44,757 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 16:56:44] 2026-02-15 15:56:44,759 [wrapper] pilotpid: 1595717
[2026-02-15 16:56:44] 2026-02-15 15:56:44,762 [wrapper] Pilot exit status: 0
[2026-02-15 16:56:44] 2026-02-15 15:56:44,770 [wrapper] pandaids: 7010781841
[2026-02-15 16:56:44] 2026-02-15 15:56:44,787 [wrapper] cleanup supervisor_pilot 1605386 1595718
[2026-02-15 16:56:44] 2026-02-15 15:56:44,790 [wrapper] Test setup, not cleaning
[2026-02-15 16:56:44] 2026-02-15 15:56:44,792 [wrapper] apfmon messages muted
[2026-02-15 16:56:44] 2026-02-15 15:56:44,795 [wrapper] ==== wrapper stdout END ====
[2026-02-15 16:56:44] 2026-02-15 15:56:44,797 [wrapper] ==== wrapper stderr END ====
[2026-02-15 16:56:44]  *** Error codes and diagnostics ***
[2026-02-15 16:56:44]     "exeErrorCode": 0,
[2026-02-15 16:56:44]     "exeErrorDiag": "",
[2026-02-15 16:56:44]     "pilotErrorCode": 0,
[2026-02-15 16:56:44]     "pilotErrorDiag": "",
[2026-02-15 16:56:44]  *** Listing of results directory ***
[2026-02-15 16:56:44] total 664904
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc    584627 Feb 15 04:23 pilot3.tar.gz
[2026-02-15 16:56:44] -rwx------ 1 boinc boinc     36322 Feb 15 04:23 runpilot2-wrapper.sh
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc      5111 Feb 15 04:24 queuedata.json
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc       100 Feb 15 15:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 16:56:44] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 15:53 run_atlas
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc       105 Feb 15 15:53 job.xml
[2026-02-15 16:56:44] -rw-r--r-- 2 boinc boinc 492088489 Feb 15 15:53 EVNT.48442096._000170.pool.root.1
[2026-02-15 16:56:44] -rw-r--r-- 2 boinc boinc    597957 Feb 15 15:53 input.tar.gz
[2026-02-15 16:56:44] -rw-r--r-- 2 boinc boinc     15845 Feb 15 15:53 start_atlas.sh
[2026-02-15 16:56:44] drwxrwx--x 2 boinc boinc      4096 Feb 15 15:53 shared
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc         0 Feb 15 15:53 boinc_setup_complete
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc      6438 Feb 15 15:53 init_data.xml
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc         0 Feb 15 15:53 boinc_lockfile
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc      2529 Feb 15 15:53 pandaJob.out
[2026-02-15 16:56:44] -rw------- 1 boinc boinc   1000992 Feb 15 15:53 agis_schedconf.cvmfs.json
[2026-02-15 16:56:44] -rw------- 1 boinc boinc   1513015 Feb 15 15:53 agis_ddmendpoints.agis.ALL.json
[2026-02-15 16:56:44] -rw------- 1 boinc boinc       427 Feb 15 15:53 workernode_map.json
[2026-02-15 16:56:44] drwx------ 5 boinc boinc      4096 Feb 15 15:53 pilot3
[2026-02-15 16:56:44] -rw------- 1 boinc boinc        95 Feb 15 16:55 pilot_heartbeat.json
[2026-02-15 16:56:44] -rw------- 1 boinc boinc 183238277 Feb 15 16:55 HITS.48442098._009297.pool.root.1
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc       531 Feb 15 16:56 boinc_task_state.xml
[2026-02-15 16:56:44] -rw------- 1 boinc boinc      1029 Feb 15 16:56 memory_monitor_summary.json
[2026-02-15 16:56:44] -rw------- 1 boinc boinc    242274 Feb 15 16:56 log.48442098._009297.job.log.tgz.1
[2026-02-15 16:56:44] -rw------- 1 boinc boinc      6299 Feb 15 16:56 heartbeat.json
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc        27 Feb 15 16:56 wrapper_checkpoint.txt
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc      8192 Feb 15 16:56 boinc_mmap_file
[2026-02-15 16:56:44] -rw------- 1 boinc boinc       747 Feb 15 16:56 pilotlog.txt
[2026-02-15 16:56:44] -rw------- 1 boinc boinc    565233 Feb 15 16:56 log.48442098._009297.job.log.1
[2026-02-15 16:56:44] -rw------- 1 boinc boinc       357 Feb 15 16:56 output.list
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc       620 Feb 15 16:56 runtime_log
[2026-02-15 16:56:44] -rw------- 1 boinc boinc    829440 Feb 15 16:56 result.tar.gz
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc      8916 Feb 15 16:56 runtime_log.err
[2026-02-15 16:56:44] -rw------- 1 boinc boinc       661 Feb 15 16:56 7mgKDmduhB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmklnKDmd9ybPm.diag
[2026-02-15 16:56:44] -rw-r--r-- 1 boinc boinc     10707 Feb 15 16:56 stderr.txt
[2026-02-15 16:56:44] HITS file was successfully produced:
[2026-02-15 16:56:44] -rw------- 1 boinc boinc 183238277 Feb 15 16:55 shared/HITS.pool.root.1
[2026-02-15 16:56:44]  *** Contents of shared directory: ***
[2026-02-15 16:56:44] total 660920
[2026-02-15 16:56:44] -rw-r--r-- 2 boinc boinc 492088489 Feb 15 15:53 ATLAS.root_0
[2026-02-15 16:56:44] -rw-r--r-- 2 boinc boinc    597957 Feb 15 15:53 input.tar.gz
[2026-02-15 16:56:44] -rw-r--r-- 2 boinc boinc     15845 Feb 15 15:53 start_atlas.sh
[2026-02-15 16:56:44] -rw------- 1 boinc boinc 183238277 Feb 15 16:55 HITS.pool.root.1
[2026-02-15 16:56:44] -rw------- 1 boinc boinc    829440 Feb 15 16:56 result.tar.gz
16:56:45 (1591610): run_atlas exited; CPU time 14059.532078
16:56:45 (1591610): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN