Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
05:34:59 (511150): wrapper (7.7.26015): starting
05:34:59 (511150): wrapper: running run_atlas (--nthreads 2)
[2026-02-15 05:34:59] Arguments: --nthreads 2
[2026-02-15 05:34:59] Threads: 2
[2026-02-15 05:34:59] Checking for CVMFS
[2026-02-15 05:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-15 05:35:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-15 05:35:00] Running cvmfs_config stat atlas.cern.ch
[2026-02-15 05:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-15 05:35:00] 2.13.1.0 367989 354 51036 156256 2 50 3544589 4096000 1844 130560 0 370235 98.606 475411 871 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-15 05:35:00] CVMFS is ok
[2026-02-15 05:35:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 05:35:00] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-15 05:35:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-15 05:35:00] Further information can be found at the LHC@home message board.
[2026-02-15 05:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 05:35:00] Checking for apptainer binary...
[2026-02-15 05:35:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-15 05:35:00] Running /usr/bin/apptainer --version
[2026-02-15 05:35:00] apptainer version 1.2.3
[2026-02-15 05:35:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 05:35:00] Ryzen-7-7700-Zen4-Deb12
[2026-02-15 05:35:00] apptainer works
[2026-02-15 05:35:00] Set ATHENA_PROC_NUMBER=2
[2026-02-15 05:35:00] Set ATHENA_CORE_NUMBER=2
[2026-02-15 05:35:00] Starting ATLAS job with PandaID=7010388881
[2026-02-15 05:35:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 08:35:46]  *** The last 200 lines of the pilot log: ***
[2026-02-15 08:35:46] 2026-02-15 07:35:12,595 | INFO     | time since job start (10790s) is within the limit (349056.0s)
[2026-02-15 08:35:46] 2026-02-15 07:35:12,712 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-15 08:35:46] 2026-02-15 07:35:13,198 | INFO     | job 7010388881 has state=finished
[2026-02-15 08:35:46] 2026-02-15 07:35:13,198 | INFO     | preparing for final server update for job 7010388881 in state='finished'
[2026-02-15 08:35:46] 2026-02-15 07:35:13,198 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7010388881/jobReport.json
[2026-02-15 08:35:46] 2026-02-15 07:35:13,199 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-02-15 08:35:46] 2026-02-15 07:35:13,200 | INFO     | this job has now completed (state=finished)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,200 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,200 | INFO     | log transfer has been attempted: DONE
[2026-02-15 08:35:46] 2026-02-15 07:35:13,200 | INFO     | job 7010388881 has finished - writing final server update
[2026-02-15 08:35:46] 2026-02-15 07:35:13,200 | INFO     | total number of processed events: 400 (read)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,201 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7010388881/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,201 | INFO     | extracted standard info from prmon json
[2026-02-15 08:35:46] 2026-02-15 07:35:13,201 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 08:35:46] 2026-02-15 07:35:13,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 08:35:46] 2026-02-15 07:35:13,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 08:35:46] 2026-02-15 07:35:13,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 08:35:46] 2026-02-15 07:35:13,202 | INFO     | fitting pss+swap vs Time
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | sum of square deviations: 1719429448.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | sum of deviations: -14713040546.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | mean x: 1771135507.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | mean y: 2288607.5988700567
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | intersect: 15157774374.846975
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | chi2: 1.150051937056014
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | sum of square deviations: 1577789583.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | sum of deviations: -14881712347.500002
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | mean x: 1771135354.5
[2026-02-15 08:35:46] 2026-02-15 07:35:13,203 | INFO     | mean y: 2288429.145348837
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | intersect: 16707638216.054445
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | chi2: 1.1442502924604099
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | current chi2=1.1442502924604099 (change=0.5044680512825916 %)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | right removable region: 171
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | sum of square deviations: 1577789583.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | sum of deviations: -26244255303.500004
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | mean x: 1771135659.5
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | mean y: 2300687.5988372094
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | intersect: 29462589262.11838
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | chi2: 0.11371914659815857
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | current chi2=0.11371914659815857 (change=90.11182513293573 %)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,204 | INFO     | sum of square deviations: 1444149868.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | sum of deviations: -22608076932.000008
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | mean x: 1771135812.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | mean y: 2296535.5628742515
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | intersect: 27729318212.454586
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | chi2: 0.11085563705526927
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | current chi2=0.11085563705526927 (change=2.518054020408619 %)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | left removable region: 20
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | sum of square deviations: 1067554900.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | sum of deviations: -14636043174.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | mean x: 1771135934.0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | mean y: 2286157.940397351
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | intersect: 24284336661.42909
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | chi2: 0.08946292142166112
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | current memory leak: -13.71 B/s (using 151 data points, chi2=0.09)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | could have reported an average CPU frequency of 4824 MHz (9 samples)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | ..............................
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | . Timing measurements:
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | . get job = 0 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | . initial setup = 9 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | . payload setup = 3 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,205 | INFO     | . stage-in = 0 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,206 | INFO     | . payload execution = 10770 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,206 | INFO     | . stage-out = 0 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,206 | INFO     | . log creation = 0 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,206 | INFO     | ..............................
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | 
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | job summary report
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | --------------------------------------------------
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | PanDA job id: 7010388881
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | task id: 48610874
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | errors: (none)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | pilot state: finished 
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | transexitcode: 0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | exeerrorcode: 0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | exeerrordiag: 
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | exitcode: 0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | exitmsg: OK
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | cpuconsumptiontime: 21327 s
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | nevents: 400
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | neventsw: 0
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | pid: 519906
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | pgrp: 519906
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | corecount: 2
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | event service: False
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | sizes: {0: 2281832, 1: 2282293, 11: 2282293, 10777: 2311525, 10778: 2320537, 10780: 2320979}
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | --------------------------------------------------
[2026-02-15 08:35:46] 2026-02-15 07:35:13,262 | INFO     | 
[2026-02-15 08:35:46] 2026-02-15 07:35:13,263 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-02-15 08:35:46] 2026-02-15 07:35:13,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,274 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,274 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,274 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | job 7010388881 has completed (purged errors)
[2026-02-15 08:35:46] 2026-02-15 07:35:13,275 | INFO     | overall cleanup function is called
[2026-02-15 08:35:46] 2026-02-15 07:35:14,279 | INFO     | --- collectZombieJob: --- 10, [519906]
[2026-02-15 08:35:46] 2026-02-15 07:35:14,279 | INFO     | zombie collector waiting for pid 519906
[2026-02-15 08:35:46] 2026-02-15 07:35:14,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 08:35:46] 2026-02-15 07:35:14,279 | INFO     | collected zombie processes
[2026-02-15 08:35:46] 2026-02-15 07:35:14,279 | INFO     | will attempt to kill all subprocesses of pid=519906
[2026-02-15 08:35:46] 2026-02-15 07:35:14,304 | INFO     | process IDs to be killed: [519906] (in reverse order)
[2026-02-15 08:35:46] 2026-02-15 07:35:14,341 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 08:35:46] 2026-02-15 07:35:14,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 08:35:46] 2026-02-15 07:35:14,342 | INFO     | did not find any defunct processes belonging to 519906
[2026-02-15 08:35:46] 2026-02-15 07:35:14,343 | INFO     | did not find any defunct processes belonging to 519906
[2026-02-15 08:35:46] 2026-02-15 07:35:14,343 | INFO     | ready for new job
[2026-02-15 08:35:46] 2026-02-15 07:35:14,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 08:35:46] 2026-02-15 07:35:14,344 | INFO     | **************************************
[2026-02-15 08:35:46] 2026-02-15 07:35:14,344 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 08:35:46] 2026-02-15 07:35:14,344 | INFO     | **************************************
[2026-02-15 08:35:46] 2026-02-15 07:35:14,344 | INFO     | 
[2026-02-15 08:35:46] 2026-02-15 07:35:14,344 | INFO     | architecture information:
[2026-02-15 08:35:46] 2026-02-15 07:35:14,344 | INFO     | executing command: cat /etc/os-release
[2026-02-15 08:35:46] 2026-02-15 07:35:14,360 | INFO     | cat /etc/os-release:
[2026-02-15 08:35:46] NAME="CentOS Linux"
[2026-02-15 08:35:46] VERSION="7 (Core)"
[2026-02-15 08:35:46] ID="centos"
[2026-02-15 08:35:46] ID_LIKE="rhel fedora"
[2026-02-15 08:35:46] VERSION_ID="7"
[2026-02-15 08:35:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 08:35:46] ANSI_COLOR="0;31"
[2026-02-15 08:35:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 08:35:46] HOME_URL="https://www.centos.org/"
[2026-02-15 08:35:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 08:35:46] 
[2026-02-15 08:35:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 08:35:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 08:35:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 08:35:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 08:35:46] 
[2026-02-15 08:35:46] 2026-02-15 07:35:14,360 | INFO     | **************************************
[2026-02-15 08:35:46] 2026-02-15 07:35:14,863 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-02-15 08:35:46] 2026-02-15 07:35:14,872 | INFO     | sufficient remaining disk space (877541720064 B)
[2026-02-15 08:35:46] 2026-02-15 07:35:14,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 08:35:46] 2026-02-15 07:35:14,872 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 08:35:46] 2026-02-15 07:35:14,872 | INFO     | update_server=False
[2026-02-15 08:35:46] 2026-02-15 07:35:14,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 08:35:46] 2026-02-15 07:35:14,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 08:35:46] 2026-02-15 07:35:14,873 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 08:35:46] 2026-02-15 07:35:14,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 08:35:46] 2026-02-15 07:35:15,103 | INFO     | all data control threads have been joined
[2026-02-15 08:35:46] 2026-02-15 07:35:15,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 08:35:46] 2026-02-15 07:35:15,419 | INFO     | aborting loop
[2026-02-15 08:35:46] 2026-02-15 07:35:15,583 | INFO     | all job control threads have been joined
[2026-02-15 08:35:46] 2026-02-15 07:35:15,875 | INFO     | [job] queue monitor thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:15,875 | INFO     | [job] retrieve thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:15,879 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:15,882 | INFO     | all payload control threads have been joined
[2026-02-15 08:35:46] 2026-02-15 07:35:15,927 | INFO     | [payload] validate_post thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,027 | INFO     | [data] copytool_in thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,107 | INFO     | [data] control thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,134 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,423 | INFO     | [job] job monitor thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,587 | INFO     | [job] control thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,875 | INFO     | [data] copytool_out thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,887 | INFO     | [payload] control thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,907 | INFO     | [payload] failed_post thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,907 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:16,923 | INFO     | [job] validate thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:17,247 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:18,875 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 08:35:46] 2026-02-15 07:35:40,099 | INFO     | [monitor] cgroup control has ended
[2026-02-15 08:35:46] 2026-02-15 07:35:41,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098436151104)>', '<ExcThread(monitor, started 140098154018560)>']
[2026-02-15 08:35:46] 2026-02-15 07:35:45,642 | INFO     | PID=515280 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-15 08:35:46] 2026-02-15 07:35:45,643 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 08:35:46] 2026-02-15 07:35:45,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 08:35:46] 2026-02-15 07:35:45,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 08:35:46] 2026-02-15 07:35:45,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 08:35:46] 2026-02-15 07:35:45,643 | INFO     | [monitor] control thread has ended
[2026-02-15 08:35:46] 2026-02-15 07:35:46,843 | INFO     | all workflow threads have been joined
[2026-02-15 08:35:46] 2026-02-15 07:35:46,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 08:35:46] 2026-02-15 07:35:46,843 | INFO     | traces error code: 0
[2026-02-15 08:35:46] 2026-02-15 07:35:46,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 08:35:46] 2026-02-15 07:35:46,893 [wrapper] ==== pilot stdout END ====
[2026-02-15 08:35:46] 2026-02-15 07:35:46,895 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 08:35:46] 2026-02-15 07:35:46,903 [wrapper] pilotpid: 515280
[2026-02-15 08:35:46] 2026-02-15 07:35:46,904 [wrapper] Pilot exit status: 0
[2026-02-15 08:35:46] 2026-02-15 07:35:46,911 [wrapper] pandaids: 7010388881
[2026-02-15 08:35:46] 2026-02-15 07:35:46,922 [wrapper] cleanup supervisor_pilot  583446 515281
[2026-02-15 08:35:46] 2026-02-15 07:35:46,923 [wrapper] Test setup, not cleaning
[2026-02-15 08:35:46] 2026-02-15 07:35:46,927 [wrapper] apfmon messages muted
[2026-02-15 08:35:46] 2026-02-15 07:35:46,931 [wrapper] ==== wrapper stdout END ====
[2026-02-15 08:35:46] 2026-02-15 07:35:46,932 [wrapper] ==== wrapper stderr END ====
[2026-02-15 08:35:46]  *** Error codes and diagnostics ***
[2026-02-15 08:35:46]     "exeErrorCode": 0,
[2026-02-15 08:35:46]     "exeErrorDiag": "",
[2026-02-15 08:35:46]     "pilotErrorCode": 0,
[2026-02-15 08:35:46]     "pilotErrorDiag": "",
[2026-02-15 08:35:46]  *** Listing of results directory ***
[2026-02-15 08:35:46] total 478540
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc    584627 Feb 15 00:42 pilot3.tar.gz
[2026-02-15 08:35:46] -rwx------ 1 boinc boinc     36322 Feb 15 00:44 runpilot2-wrapper.sh
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc      5111 Feb 15 00:48 queuedata.json
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc       100 Feb 15 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 08:35:46] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 05:34 run_atlas
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc       105 Feb 15 05:34 job.xml
[2026-02-15 08:35:46] -rw-r--r-- 2 boinc boinc     15845 Feb 15 05:34 start_atlas.sh
[2026-02-15 08:35:46] drwxrwx--x 2 boinc boinc      4096 Feb 15 05:34 shared
[2026-02-15 08:35:46] -rw-r--r-- 2 boinc boinc    597951 Feb 15 05:34 input.tar.gz
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc      6774 Feb 15 05:34 init_data.xml
[2026-02-15 08:35:46] -rw-r--r-- 2 boinc boinc 286681474 Feb 15 05:34 EVNT.48610872._000032.pool.root.1
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc         0 Feb 15 05:34 boinc_lockfile
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc      2553 Feb 15 05:35 pandaJob.out
[2026-02-15 08:35:46] -rw------- 1 boinc boinc   1000934 Feb 15 05:35 agis_schedconf.cvmfs.json
[2026-02-15 08:35:46] -rw------- 1 boinc boinc   1513015 Feb 15 05:35 agis_ddmendpoints.agis.ALL.json
[2026-02-15 08:35:46] -rw------- 1 boinc boinc       428 Feb 15 05:35 workernode_map.json
[2026-02-15 08:35:46] drwx------ 5 boinc boinc      4096 Feb 15 05:35 pilot3
[2026-02-15 08:35:46] -rw------- 1 boinc boinc 195654180 Feb 15 08:34 HITS.48610874._000730.pool.root.1
[2026-02-15 08:35:46] -rw------- 1 boinc boinc        95 Feb 15 08:35 pilot_heartbeat.json
[2026-02-15 08:35:46] -rw------- 1 boinc boinc      1020 Feb 15 08:35 memory_monitor_summary.json
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc       529 Feb 15 08:35 boinc_task_state.xml
[2026-02-15 08:35:46] -rw------- 1 boinc boinc    311122 Feb 15 08:35 log.48610874._000730.job.log.tgz.1
[2026-02-15 08:35:46] -rw------- 1 boinc boinc      6308 Feb 15 08:35 heartbeat.json
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc      8192 Feb 15 08:35 boinc_mmap_file
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc        27 Feb 15 08:35 wrapper_checkpoint.txt
[2026-02-15 08:35:46] -rw------- 1 boinc boinc      4751 Feb 15 08:35 pilotlog.txt
[2026-02-15 08:35:46] -rw------- 1 boinc boinc   1572618 Feb 15 08:35 log.48610874._000730.job.log.1
[2026-02-15 08:35:46] -rw------- 1 boinc boinc       357 Feb 15 08:35 output.list
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc       620 Feb 15 08:35 runtime_log
[2026-02-15 08:35:46] -rw------- 1 boinc boinc   1904640 Feb 15 08:35 result.tar.gz
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc      8954 Feb 15 08:35 runtime_log.err
[2026-02-15 08:35:46] -rw------- 1 boinc boinc       657 Feb 15 08:35 MwDODmyUeB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWUoKDmjPJ50n.diag
[2026-02-15 08:35:46] -rw-r--r-- 1 boinc boinc      9150 Feb 15 08:35 stderr.txt
[2026-02-15 08:35:46] HITS file was successfully produced:
[2026-02-15 08:35:46] -rw------- 1 boinc boinc 195654180 Feb 15 08:34 shared/HITS.pool.root.1
[2026-02-15 08:35:46]  *** Contents of shared directory: ***
[2026-02-15 08:35:46] total 473504
[2026-02-15 08:35:46] -rw-r--r-- 2 boinc boinc     15845 Feb 15 05:34 start_atlas.sh
[2026-02-15 08:35:46] -rw-r--r-- 2 boinc boinc    597951 Feb 15 05:34 input.tar.gz
[2026-02-15 08:35:46] -rw-r--r-- 2 boinc boinc 286681474 Feb 15 05:34 ATLAS.root_0
[2026-02-15 08:35:46] -rw------- 1 boinc boinc 195654180 Feb 15 08:34 HITS.pool.root.1
[2026-02-15 08:35:46] -rw------- 1 boinc boinc   1904640 Feb 15 08:35 result.tar.gz
08:35:48 (511150): run_atlas exited; CPU time 21359.885286
08:35:48 (511150): called boinc_finish(0)

</stderr_txt>
]]>

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