Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:25:13 (2909313): wrapper (7.7.26015): starting
06:25:13 (2909313): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 06:25:13] Arguments: --nthreads 4
[2026-02-15 06:25:13] Threads: 4
[2026-02-15 06:25:13] Checking for CVMFS
[2026-02-15 06:25:13] No cvmfs_config command found, will try listing directly
[2026-02-15 06:25:13] CVMFS is ok
[2026-02-15 06:25:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 06:25:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 06:25:13] Further information can be found at the LHC@home message board.
[2026-02-15 06:25:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 06:25:13] Checking for apptainer binary...
[2026-02-15 06:25:13] which: no apptainer in ((null))
[2026-02-15 06:25:13] apptainer is not installed, using version from CVMFS
[2026-02-15 06:25:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 06:25:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-02-15 06:25:13] apptainer works
[2026-02-15 06:25:13] Set ATHENA_PROC_NUMBER=4
[2026-02-15 06:25:13] Set ATHENA_CORE_NUMBER=4
[2026-02-15 06:25:13] Starting ATLAS job with PandaID=7010388389
[2026-02-15 06:25:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 08:54:51]  *** The last 200 lines of the pilot log: ***
[2026-02-15 08:54:51] 2026-02-15 07:54:06,511 | INFO     | reading metadata from: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7010388389/jobReport.json
[2026-02-15 08:54:51] 2026-02-15 07:54:06,513 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot60/slots/0/workernode_map.json
[2026-02-15 08:54:51] 2026-02-15 07:54:06,513 | INFO     | this job has now completed (state=finished)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,514 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,514 | INFO     | log transfer has been attempted: DONE
[2026-02-15 08:54:51] 2026-02-15 07:54:06,514 | INFO     | job 7010388389 has finished - writing final server update
[2026-02-15 08:54:51] 2026-02-15 07:54:06,514 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2776412/.job.ad'
[2026-02-15 08:54:51] 2026-02-15 07:54:06,514 | INFO     | total number of processed events: 400 (read)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,537 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7010388389/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,537 | INFO     | extracted standard info from prmon json
[2026-02-15 08:54:51] 2026-02-15 07:54:06,537 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 08:54:51] 2026-02-15 07:54:06,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 08:54:51] 2026-02-15 07:54:06,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 08:54:51] 2026-02-15 07:54:06,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 08:54:51] 2026-02-15 07:54:06,540 | INFO     | fitting pss+swap vs Time
[2026-02-15 08:54:51] 2026-02-15 07:54:06,541 | INFO     | sum of square deviations: 964976232.5
[2026-02-15 08:54:51] 2026-02-15 07:54:06,542 | INFO     | sum of deviations: -2393177101.5000024
[2026-02-15 08:54:51] 2026-02-15 07:54:06,542 | INFO     | mean x: 1771137578.5
[2026-02-15 08:54:51] 2026-02-15 07:54:06,542 | INFO     | mean y: 2352464.9246575343
[2026-02-15 08:54:51] 2026-02-15 07:54:06,542 | INFO     | intersect: 4394839817.168707
[2026-02-15 08:54:51] 2026-02-15 07:54:06,542 | INFO     | chi2: 1.0867140764838188
[2026-02-15 08:54:51] 2026-02-15 07:54:06,543 | INFO     | sum of square deviations: 869188390.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,543 | INFO     | sum of deviations: -2084588074.9999974
[2026-02-15 08:54:51] 2026-02-15 07:54:06,543 | INFO     | mean x: 1771137426.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,543 | INFO     | mean y: 2352956.5886524823
[2026-02-15 08:54:51] 2026-02-15 07:54:06,544 | INFO     | intersect: 4250099474.953665
[2026-02-15 08:54:51] 2026-02-15 07:54:06,544 | INFO     | chi2: 1.0869127910093161
[2026-02-15 08:54:51] 2026-02-15 07:54:06,544 | INFO     | current chi2=1.0869127910093161 (change=-0.018285814990113957 %)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,544 | INFO     | right removable region: 140
[2026-02-15 08:54:51] 2026-02-15 07:54:06,544 | INFO     | sum of square deviations: 869188390.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,545 | INFO     | sum of deviations: -14798743838.000004
[2026-02-15 08:54:51] 2026-02-15 07:54:06,545 | INFO     | mean x: 1771137731.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,545 | INFO     | mean y: 2371704.85106383
[2026-02-15 08:54:51] 2026-02-15 07:54:06,545 | INFO     | intersect: 30157645158.15335
[2026-02-15 08:54:51] 2026-02-15 07:54:06,545 | INFO     | chi2: 0.026309345235256958
[2026-02-15 08:54:51] 2026-02-15 07:54:06,546 | INFO     | current chi2=0.026309345235256958 (change=97.57900023524277 %)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,546 | INFO     | sum of square deviations: 779958810.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | sum of deviations: -13419177903.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | mean x: 1771137883.5
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | mean y: 2369343.6029411764
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | intersect: 30474766148.03084
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | chi2: 0.026255341561716074
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | current chi2=0.026255341561716074 (change=0.20526422477634773 %)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | left removable region: 20
[2026-02-15 08:54:51] 2026-02-15 07:54:06,547 | INFO     | sum of square deviations: 535786790.0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,548 | INFO     | sum of deviations: -9146301356.5
[2026-02-15 08:54:51] 2026-02-15 07:54:06,548 | INFO     | mean x: 1771138005.5
[2026-02-15 08:54:51] 2026-02-15 07:54:06,548 | INFO     | mean y: 2363426.091666667
[2026-02-15 08:54:51] 2026-02-15 07:54:06,548 | INFO     | intersect: 30237080378.059357
[2026-02-15 08:54:51] 2026-02-15 07:54:06,549 | INFO     | chi2: 0.02335524213553442
[2026-02-15 08:54:51] 2026-02-15 07:54:06,549 | INFO     | current memory leak: -17.07 B/s (using 120 data points, chi2=0.02)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,549 | INFO     | could have reported an average CPU frequency of 2772 MHz (8 samples)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,549 | INFO     | ..............................
[2026-02-15 08:54:51] 2026-02-15 07:54:06,549 | INFO     | . Timing measurements:
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . get job = 0 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . initial setup = 7 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . payload setup = 7 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . stage-in = 0 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . payload execution = 8890 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . stage-out = 1 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | . log creation = 0 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,550 | INFO     | ..............................
[2026-02-15 08:54:51] 2026-02-15 07:54:06,709 | INFO     | 
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | job summary report
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | --------------------------------------------------
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | PanDA job id: 7010388389
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | task id: 48610874
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | errors: (none)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | pilot state: finished 
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | transexitcode: 0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | exeerrorcode: 0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,710 | INFO     | exeerrordiag: 
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | exitcode: 0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | exitmsg: OK
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | cpuconsumptiontime: 34552 s
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | nevents: 400
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | neventsw: 0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | pid: 2918695
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | pgrp: 2918695
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | corecount: 4
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | event service: False
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | sizes: {0: 2281168, 1: 2282297, 12: 2282297, 8898: 2310444, 8899: 2319464, 8902: 2319520, 8903: 2319842}
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | --------------------------------------------------
[2026-02-15 08:54:51] 2026-02-15 07:54:06,711 | INFO     | 
[2026-02-15 08:54:51] 2026-02-15 07:54:06,712 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-02-15 08:54:51] 2026-02-15 07:54:06,738 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,738 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,738 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,738 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,740 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 08:54:51] 2026-02-15 07:54:06,740 | INFO     | job 7010388389 has completed (purged errors)
[2026-02-15 08:54:51] 2026-02-15 07:54:06,740 | INFO     | overall cleanup function is called
[2026-02-15 08:54:51] 2026-02-15 07:54:07,749 | INFO     | --- collectZombieJob: --- 10, [2918695]
[2026-02-15 08:54:51] 2026-02-15 07:54:07,749 | INFO     | zombie collector waiting for pid 2918695
[2026-02-15 08:54:51] 2026-02-15 07:54:07,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 08:54:51] 2026-02-15 07:54:07,749 | INFO     | collected zombie processes
[2026-02-15 08:54:51] 2026-02-15 07:54:07,749 | INFO     | will attempt to kill all subprocesses of pid=2918695
[2026-02-15 08:54:51] 2026-02-15 07:54:08,226 | INFO     | process IDs to be killed: [2918695] (in reverse order)
[2026-02-15 08:54:51] 2026-02-15 07:54:08,463 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 08:54:51] 2026-02-15 07:54:08,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 08:54:51] 2026-02-15 07:54:08,485 | INFO     | did not find any defunct processes belonging to 2918695
[2026-02-15 08:54:51] 2026-02-15 07:54:08,502 | INFO     | did not find any defunct processes belonging to 2918695
[2026-02-15 08:54:51] 2026-02-15 07:54:08,502 | INFO     | ready for new job
[2026-02-15 08:54:51] 2026-02-15 07:54:08,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 08:54:51] 2026-02-15 07:54:08,505 | INFO     | **************************************
[2026-02-15 08:54:51] 2026-02-15 07:54:08,505 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 08:54:51] 2026-02-15 07:54:08,505 | INFO     | **************************************
[2026-02-15 08:54:51] 2026-02-15 07:54:08,505 | INFO     | 
[2026-02-15 08:54:51] 2026-02-15 07:54:08,513 | INFO     | architecture information:
[2026-02-15 08:54:51] 2026-02-15 07:54:08,513 | INFO     | executing command: cat /etc/os-release
[2026-02-15 08:54:51] 2026-02-15 07:54:08,536 | INFO     | cat /etc/os-release:
[2026-02-15 08:54:51] NAME="CentOS Linux"
[2026-02-15 08:54:51] VERSION="7 (Core)"
[2026-02-15 08:54:51] ID="centos"
[2026-02-15 08:54:51] ID_LIKE="rhel fedora"
[2026-02-15 08:54:51] VERSION_ID="7"
[2026-02-15 08:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 08:54:51] ANSI_COLOR="0;31"
[2026-02-15 08:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 08:54:51] HOME_URL="https://www.centos.org/"
[2026-02-15 08:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 08:54:51] 
[2026-02-15 08:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 08:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 08:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 08:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 08:54:51] 
[2026-02-15 08:54:51] 2026-02-15 07:54:08,536 | INFO     | **************************************
[2026-02-15 08:54:51] 2026-02-15 07:54:09,039 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-02-15 08:54:51] 2026-02-15 07:54:09,063 | INFO     | sufficient remaining disk space (3249623007232 B)
[2026-02-15 08:54:51] 2026-02-15 07:54:09,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 08:54:51] 2026-02-15 07:54:09,064 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 08:54:51] 2026-02-15 07:54:09,064 | INFO     | update_server=False
[2026-02-15 08:54:51] 2026-02-15 07:54:09,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 08:54:51] 2026-02-15 07:54:09,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-15 08:54:51] 2026-02-15 07:54:09,512 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-15 08:54:51] 2026-02-15 07:54:09,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 08:54:51] 2026-02-15 07:54:09,512 | INFO     | will abort loop
[2026-02-15 08:54:51] 2026-02-15 07:54:09,584 | INFO     | all job control threads have been joined
[2026-02-15 08:54:51] 2026-02-15 07:54:09,834 | INFO     | all payload control threads have been joined
[2026-02-15 08:54:51] 2026-02-15 07:54:10,069 | INFO     | [job] retrieve thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,083 | INFO     | all data control threads have been joined
[2026-02-15 08:54:51] 2026-02-15 07:54:10,281 | INFO     | [payload] validate_post thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 08:54:51] 2026-02-15 07:54:10,442 | INFO     | [data] copytool_in thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,517 | INFO     | [job] job monitor thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,590 | INFO     | [job] control thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,720 | INFO     | [payload] failed_post thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,771 | INFO     | [job] validate thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:10,840 | INFO     | [payload] control thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:11,089 | INFO     | [data] control thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:11,140 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:11,152 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:11,212 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:11,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 08:54:51] 2026-02-15 07:54:11,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 08:54:51] 2026-02-15 07:54:12,405 | INFO     | [data] copytool_out thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:12,658 | INFO     | [job] queue monitor thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:15,532 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:19,827 | INFO     | job.realtimelogging is not enabled
[2026-02-15 08:54:51] 2026-02-15 07:54:20,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 08:54:51] 2026-02-15 07:54:38,939 | INFO     | PID=2913635 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-15 08:54:51] 2026-02-15 07:54:38,939 | INFO     | .. there are 21 such processes running
[2026-02-15 08:54:51] 2026-02-15 07:54:38,939 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 08:54:51] 2026-02-15 07:54:38,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 08:54:51] 2026-02-15 07:54:38,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 08:54:51] 2026-02-15 07:54:43,692 | INFO     | [monitor] cgroup control has ended
[2026-02-15 08:54:51] 2026-02-15 07:54:45,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23095711307584)>', '<ExcThread(monitor, started 23095472830208)>']
[2026-02-15 08:54:51] 2026-02-15 07:54:45,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 08:54:51] 2026-02-15 07:54:45,969 | INFO     | [monitor] control thread has ended
[2026-02-15 08:54:51] 2026-02-15 07:54:50,672 | INFO     | all workflow threads have been joined
[2026-02-15 08:54:51] 2026-02-15 07:54:50,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 08:54:51] 2026-02-15 07:54:50,672 | INFO     | traces error code: 0
[2026-02-15 08:54:51] 2026-02-15 07:54:50,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 08:54:51] 2026-02-15 07:54:50,792 [wrapper] ==== pilot stdout END ====
[2026-02-15 08:54:51] 2026-02-15 07:54:50,796 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 08:54:51] 2026-02-15 07:54:50,800 [wrapper] pilotpid: 2913635
[2026-02-15 08:54:51] 2026-02-15 07:54:50,804 [wrapper] Pilot exit status: 0
[2026-02-15 08:54:51] 2026-02-15 07:54:50,818 [wrapper] pandaids: 7010388389
[2026-02-15 08:54:51] 2026-02-15 07:54:50,963 [wrapper] cleanup supervisor_pilot 3297595 2913636
[2026-02-15 08:54:51] 2026-02-15 07:54:50,967 [wrapper] Test setup, not cleaning
[2026-02-15 08:54:51] 2026-02-15 07:54:50,971 [wrapper] apfmon messages muted
[2026-02-15 08:54:51] 2026-02-15 07:54:50,975 [wrapper] ==== wrapper stdout END ====
[2026-02-15 08:54:51] 2026-02-15 07:54:50,979 [wrapper] ==== wrapper stderr END ====
[2026-02-15 08:54:51]  *** Error codes and diagnostics ***
[2026-02-15 08:54:51]     "exeErrorCode": 0,
[2026-02-15 08:54:51]     "exeErrorDiag": "",
[2026-02-15 08:54:51]     "pilotErrorCode": 0,
[2026-02-15 08:54:51]     "pilotErrorDiag": "",
[2026-02-15 08:54:51]  *** Listing of results directory ***
[2026-02-15 08:54:51] total 468364
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc    584627 Feb 15 00:42 pilot3.tar.gz
[2026-02-15 08:54:51] -rwx------ 1 boinc boinc     36322 Feb 15 00:43 runpilot2-wrapper.sh
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc      5111 Feb 15 00:45 queuedata.json
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc       100 Feb 15 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 08:54:51] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 05:13 run_atlas
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc       105 Feb 15 05:13 job.xml
[2026-02-15 08:54:51] -rw-r--r-- 2 boinc boinc 281526946 Feb 15 06:25 EVNT.48610872._000018.pool.root.1
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc      6695 Feb 15 06:25 init_data.xml
[2026-02-15 08:54:51] -rw-r--r-- 2 boinc boinc     15845 Feb 15 06:25 start_atlas.sh
[2026-02-15 08:54:51] drwxrwx--x 2 boinc boinc      4096 Feb 15 06:25 shared
[2026-02-15 08:54:51] -rw-r--r-- 2 boinc boinc    597947 Feb 15 06:25 input.tar.gz
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc         0 Feb 15 06:25 boinc_lockfile
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc      2553 Feb 15 06:25 pandaJob.out
[2026-02-15 08:54:51] -rw------- 1 boinc boinc   1000934 Feb 15 06:25 agis_schedconf.cvmfs.json
[2026-02-15 08:54:51] -rw------- 1 boinc boinc   1513015 Feb 15 06:25 agis_ddmendpoints.agis.ALL.json
[2026-02-15 08:54:51] -rw------- 1 boinc boinc       443 Feb 15 06:25 workernode_map.json
[2026-02-15 08:54:51] drwx------ 5 boinc boinc      4096 Feb 15 06:25 pilot3
[2026-02-15 08:54:51] -rw------- 1 boinc boinc 190958581 Feb 15 08:53 HITS.48610874._000391.pool.root.1
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc       529 Feb 15 08:53 boinc_task_state.xml
[2026-02-15 08:54:51] -rw------- 1 boinc boinc        95 Feb 15 08:53 pilot_heartbeat.json
[2026-02-15 08:54:51] -rw------- 1 boinc boinc      1033 Feb 15 08:54 memory_monitor_summary.json
[2026-02-15 08:54:51] -rw------- 1 boinc boinc    332821 Feb 15 08:54 log.48610874._000391.job.log.tgz.1
[2026-02-15 08:54:51] -rw------- 1 boinc boinc      6351 Feb 15 08:54 heartbeat.json
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc        27 Feb 15 08:54 wrapper_checkpoint.txt
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc      8192 Feb 15 08:54 boinc_mmap_file
[2026-02-15 08:54:51] -rw------- 1 boinc boinc      5089 Feb 15 08:54 pilotlog.txt
[2026-02-15 08:54:51] -rw------- 1 boinc boinc   1258497 Feb 15 08:54 log.48610874._000391.job.log.1
[2026-02-15 08:54:51] -rw------- 1 boinc boinc       357 Feb 15 08:54 output.list
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc       620 Feb 15 08:54 runtime_log
[2026-02-15 08:54:51] -rw------- 1 boinc boinc   1607680 Feb 15 08:54 result.tar.gz
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc      9204 Feb 15 08:54 runtime_log.err
[2026-02-15 08:54:51] -rw------- 1 boinc boinc       662 Feb 15 08:54 4rNODmdTeB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTRoKDmeQcl6n.diag
[2026-02-15 08:54:51] -rw-r--r-- 1 boinc boinc     21114 Feb 15 08:54 stderr.txt
[2026-02-15 08:54:51] HITS file was successfully produced:
[2026-02-15 08:54:51] -rw------- 1 boinc boinc 190958581 Feb 15 08:53 shared/HITS.pool.root.1
[2026-02-15 08:54:51]  *** Contents of shared directory: ***
[2026-02-15 08:54:51] total 463596
[2026-02-15 08:54:51] -rw-r--r-- 2 boinc boinc 281526946 Feb 15 06:25 ATLAS.root_0
[2026-02-15 08:54:51] -rw-r--r-- 2 boinc boinc     15845 Feb 15 06:25 start_atlas.sh
[2026-02-15 08:54:51] -rw-r--r-- 2 boinc boinc    597947 Feb 15 06:25 input.tar.gz
[2026-02-15 08:54:51] -rw------- 1 boinc boinc 190958581 Feb 15 08:53 HITS.pool.root.1
[2026-02-15 08:54:51] -rw------- 1 boinc boinc   1607680 Feb 15 08:54 result.tar.gz
08:54:52 (2909313): run_atlas exited; CPU time 34945.202296
08:54:52 (2909313): called boinc_finish(0)

</stderr_txt>
]]>

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