Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:11:26 (189215): wrapper (7.7.26015): starting
23:11:26 (189215): wrapper: running run_atlas (--nthreads 12)
[2026-02-14 23:11:26] Arguments: --nthreads 12
[2026-02-14 23:11:26] Threads: 12
[2026-02-14 23:11:26] Checking for CVMFS
[2026-02-14 23:11:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-14 23:11:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-14 23:11:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-14 23:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-14 23:11:28] 2.11.5.0 3814305 144425 257688 156260 3 70 36562391 45568000 14296 130560 0 1300658050 99.801 780394220 19562 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-14 23:11:28] CVMFS is ok
[2026-02-14 23:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-14 23:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-14 23:11:28] Further information can be found at the LHC@home message board.
[2026-02-14 23:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-14 23:11:28] Checking for apptainer binary...
[2026-02-14 23:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-14 23:11:28] Running /usr/bin/apptainer --version
[2026-02-14 23:11:28] apptainer version 1.4.1-1.el9
[2026-02-14 23:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-14 23:11:29] wns0094.triumf.lcg
[2026-02-14 23:11:29] apptainer works
[2026-02-14 23:11:29] Set ATHENA_PROC_NUMBER=12
[2026-02-14 23:11:29] Set ATHENA_CORE_NUMBER=12
[2026-02-14 23:11:29] Starting ATLAS job with PandaID=7010914023
[2026-02-14 23:11:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-14 23:16:13]  *** The last 200 lines of the pilot log: ***
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . Timing measurements:
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . get job = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . initial setup = 17 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . payload setup = 22 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . stage-in = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . payload execution = 44 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . stage-out = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . log creation = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | ..............................
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7010914023/pilotlog.txt
[2026-02-14 23:16:13] 2026-02-15 07:15:30,198 | INFO     | monitor loop #62: job 0:7010914023 is in state 'failed'
[2026-02-14 23:16:13] 2026-02-15 07:15:30,199 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,436 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-14 23:16:13] - Log from pilotlog.txt -
[2026-02-14 23:16:13] 2026-02-15 07:15:30,153 | INFO     | extracted standard memory fields from prmon json
[2026-02-14 23:16:13] 2026-02-15 07:15:30,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-14 23:16:13] 2026-02-15 07:15:30,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | WARNING  | wrong length of table data, x=[1771139581.0], y=[1251.0] (must be same and length>=4)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | could have reported an average CPU frequency of 2686 MHz (4 samples)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | ..............................
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . Timing measurements:
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . get job = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . initial setup = 17 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . payload setup = 22 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . stage-in = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . payload execution = 44 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . stage-out = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . log creation = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | ..............................
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7010914023/pilotlog.txt
[2026-02-14 23:16:13] 2026-02-15 07:15:30,198 | INFO     | monitor loop #62: job 0:7010914023 is in state 'failed'
[2026-02-14 23:16:13] 2026-02-15 07:15:30,199 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,436 | WARNING  | 
[2026-02-14 23:16:13] [begin log extracts]
[2026-02-14 23:16:13] - Log from pilotlog.txt -
[2026-02-14 23:16:13] 2026-02-15 07:15:30,153 | INFO     | extracted standard memory fields from prmon json
[2026-02-14 23:16:13] 2026-02-15 07:15:30,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-14 23:16:13] 2026-02-15 07:15:30,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | WARNING  | wrong length of table data, x=[1771139581.0], y=[1251.0] (must be same and length>=4)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | could have reported an average CPU frequency of 2686 MHz (4 samples)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | ..............................
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . Timing measurements:
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . get job = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,165 | INFO     | . initial setup = 17 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . payload setup = 22 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . stage-in = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . payload execution = 44 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . stage-out = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | . log creation = 0 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | ..............................
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-14 23:16:13] 2026-02-15 07:15:30,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7010914023/pilotlog.txt
[2026-02-14 23:16:13] 2026-02-15 07:15:30,198 | INFO     | monitor loop #62: job 0:7010914023 is in state 'failed'
[2026-02-14 23:16:13] 2026-02-15 07:15:30,199 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-14 23:16:13] [end log extracts]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,436 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,437 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-14 23:16:13] 2026-02-15 07:15:30,574 | INFO     | 
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | job summary report
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | --------------------------------------------------
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | PanDA job id: 7010914023
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | task id: 48508763
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-14 23:13:21,465 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | pilot state: failed 
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | transexitcode: 65
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | exeerrorcode: 65
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | exitcode: 65
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | cpuconsumptiontime: 13 s
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | nevents: 0
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | neventsw: 0
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | pid: 198619
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | pgrp: 198619
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | corecount: 12
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | event service: False
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | sizes: {0: 2281819, 1: 2252662, 2: 2282280, 12: 2282308, 71: 2305687, 72: 2309979, 75: 2310135, 191: 2310301}
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | --------------------------------------------------
[2026-02-14 23:16:13] 2026-02-15 07:15:30,575 | INFO     | 
[2026-02-14 23:16:13] 2026-02-15 07:15:30,576 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-14 23:16:13] 2026-02-15 07:15:30,666 | INFO     | PID=192949 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-14 23:16:13] 2026-02-15 07:15:30,666 | INFO     | .. there are 20 such processes running
[2026-02-14 23:16:13] 2026-02-15 07:15:30,674 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,674 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,674 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,674 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | job 7010914023 has completed (purged errors)
[2026-02-14 23:16:13] 2026-02-15 07:15:30,675 | INFO     | overall cleanup function is called
[2026-02-14 23:16:13] 2026-02-15 07:15:31,691 | INFO     | --- collectZombieJob: --- 10, [198619]
[2026-02-14 23:16:13] 2026-02-15 07:15:31,691 | INFO     | zombie collector waiting for pid 198619
[2026-02-14 23:16:13] 2026-02-15 07:15:31,691 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-14 23:16:13] 2026-02-15 07:15:31,691 | INFO     | collected zombie processes
[2026-02-14 23:16:13] 2026-02-15 07:15:31,691 | INFO     | will attempt to kill all subprocesses of pid=198619
[2026-02-14 23:16:13] 2026-02-15 07:15:31,948 | INFO     | process IDs to be killed: [198619] (in reverse order)
[2026-02-14 23:16:13] 2026-02-15 07:15:32,015 | WARNING  | found no corresponding commands to process id(s)
[2026-02-14 23:16:13] 2026-02-15 07:15:32,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-14 23:16:13] 2026-02-15 07:15:32,038 | INFO     | did not find any defunct processes belonging to 198619
[2026-02-14 23:16:13] 2026-02-15 07:15:32,044 | INFO     | did not find any defunct processes belonging to 198619
[2026-02-14 23:16:13] 2026-02-15 07:15:32,044 | INFO     | ready for new job
[2026-02-14 23:16:13] 2026-02-15 07:15:32,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-14 23:16:13] 2026-02-15 07:15:32,045 | INFO     | **************************************
[2026-02-14 23:16:13] 2026-02-15 07:15:32,045 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-14 23:16:13] 2026-02-15 07:15:32,045 | INFO     | **************************************
[2026-02-14 23:16:13] 2026-02-15 07:15:32,045 | INFO     | 
[2026-02-14 23:16:13] 2026-02-15 07:15:32,047 | INFO     | architecture information:
[2026-02-14 23:16:13] 2026-02-15 07:15:32,048 | INFO     | executing command: cat /etc/os-release
[2026-02-14 23:16:13] 2026-02-15 07:15:32,097 | INFO     | cat /etc/os-release:
[2026-02-14 23:16:13] NAME="CentOS Linux"
[2026-02-14 23:16:13] VERSION="7 (Core)"
[2026-02-14 23:16:13] ID="centos"
[2026-02-14 23:16:13] ID_LIKE="rhel fedora"
[2026-02-14 23:16:13] VERSION_ID="7"
[2026-02-14 23:16:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-14 23:16:13] ANSI_COLOR="0;31"
[2026-02-14 23:16:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-14 23:16:13] HOME_URL="https://www.centos.org/"
[2026-02-14 23:16:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-14 23:16:13] 
[2026-02-14 23:16:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-14 23:16:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-14 23:16:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-14 23:16:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-14 23:16:13] 
[2026-02-14 23:16:13] 2026-02-15 07:15:32,098 | INFO     | **************************************
[2026-02-14 23:16:13] 2026-02-15 07:15:32,601 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-14 23:16:13] 2026-02-15 07:15:32,662 | INFO     | sufficient remaining disk space (2014724489216 B)
[2026-02-14 23:16:13] 2026-02-15 07:15:32,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-14 23:16:13] 2026-02-15 07:15:32,662 | INFO     | current server update state: UPDATING_FINAL
[2026-02-14 23:16:13] 2026-02-15 07:15:32,663 | INFO     | update_server=False
[2026-02-14 23:16:13] 2026-02-15 07:15:32,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-14 23:16:13] 2026-02-15 07:15:32,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-14 23:16:13] 2026-02-15 07:15:32,703 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-14 23:16:13] 2026-02-15 07:15:32,703 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-14 23:16:13] 2026-02-15 07:15:32,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-14 23:16:13] 2026-02-15 07:15:32,703 | INFO     | will abort loop
[2026-02-14 23:16:13] 2026-02-15 07:15:33,028 | INFO     | all payload control threads have been joined
[2026-02-14 23:16:13] 2026-02-15 07:15:33,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-14 23:16:13] 2026-02-15 07:15:33,668 | INFO     | [job] retrieve thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:33,709 | INFO     | [job] job monitor thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:33,733 | INFO     | all data control threads have been joined
[2026-02-14 23:16:13] 2026-02-15 07:15:33,748 | INFO     | [job] create_data_payload thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:33,759 | INFO     | [payload] failed_post thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:33,832 | INFO     | all job control threads have been joined
[2026-02-14 23:16:13] 2026-02-15 07:15:34,033 | INFO     | [payload] control thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,587 | INFO     | [payload] validate_pre thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,587 | INFO     | [data] copytool_in thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,651 | INFO     | [payload] validate_post thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,670 | INFO     | [data] copytool_out thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,739 | INFO     | [data] control thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,837 | INFO     | [job] control thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:34,973 | INFO     | [payload] execute_payloads thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:35,046 | INFO     | [job] validate thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:35,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-14 23:16:13] 2026-02-15 07:15:36,527 | INFO     | [job] queue monitor thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:15:37,081 | INFO     | [data] queue_monitor thread has finished
[2026-02-14 23:16:13] 2026-02-15 07:16:03,422 | INFO     | PID=192949 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-14 23:16:13] 2026-02-15 07:16:03,422 | INFO     | .. there are 20 such processes running
[2026-02-14 23:16:13] 2026-02-15 07:16:03,423 | INFO     | found 0 job(s) in 20 queues
[2026-02-14 23:16:13] 2026-02-15 07:16:03,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-14 23:16:13] 2026-02-15 07:16:03,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-14 23:16:13] 2026-02-15 07:16:06,113 | INFO     | [monitor] cgroup control has ended
[2026-02-14 23:16:13] 2026-02-15 07:16:08,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138129848128)>', '<ExcThread(monitor, started 140137426036480)>']
[2026-02-14 23:16:13] 2026-02-15 07:16:08,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-14 23:16:13] 2026-02-15 07:16:08,452 | INFO     | [monitor] control thread has ended
[2026-02-14 23:16:13] 2026-02-15 07:16:13,174 | INFO     | all workflow threads have been joined
[2026-02-14 23:16:13] 2026-02-15 07:16:13,175 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-14 23:16:13] 2026-02-15 07:16:13,175 | INFO     | traces error code: 0
[2026-02-14 23:16:13] 2026-02-15 07:16:13,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-14 23:16:13] 2026-02-15 07:16:13,523 [wrapper] ==== pilot stdout END ====
[2026-02-14 23:16:13] 2026-02-15 07:16:13,533 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-14 23:16:13] 2026-02-15 07:16:13,551 [wrapper] pilotpid: 192949
[2026-02-14 23:16:13] 2026-02-15 07:16:13,553 [wrapper] Pilot exit status: 0
[2026-02-14 23:16:13] 2026-02-15 07:16:13,598 [wrapper] pandaids: 7010914023
[2026-02-14 23:16:13] 2026-02-15 07:16:13,702 [wrapper] cleanup supervisor_pilot  192955 192950
[2026-02-14 23:16:13] 2026-02-15 07:16:13,705 [wrapper] Test setup, not cleaning
[2026-02-14 23:16:13] 2026-02-15 07:16:13,707 [wrapper] apfmon messages muted
[2026-02-14 23:16:13] 2026-02-15 07:16:13,709 [wrapper] ==== wrapper stdout END ====
[2026-02-14 23:16:13] 2026-02-15 07:16:13,711 [wrapper] ==== wrapper stderr END ====
[2026-02-14 23:16:14]  *** Error codes and diagnostics ***
[2026-02-14 23:16:14]     "exeErrorCode": 65,
[2026-02-14 23:16:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-14 23:16:14]     "pilotErrorCode": 1305,
[2026-02-14 23:16:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-14 23:16:14]  *** Listing of results directory ***
[2026-02-14 23:16:14] total 672188
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc    584627 Feb 14 19:23 pilot3.tar.gz
[2026-02-14 23:16:14] -rwx------. 1 boinc boinc     36322 Feb 14 19:25 runpilot2-wrapper.sh
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc      5111 Feb 14 19:28 queuedata.json
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc       100 Feb 14 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-14 23:16:14] -rwxr-xr-x. 1 boinc boinc      7986 Feb 14 23:11 run_atlas
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc       105 Feb 14 23:11 job.xml
[2026-02-14 23:16:14] -rw-r--r--. 2 boinc boinc 684177018 Feb 14 23:11 EVNT.48508760._000093.pool.root.1
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc      6594 Feb 14 23:11 init_data.xml
[2026-02-14 23:16:14] -rw-r--r--. 2 boinc boinc     15845 Feb 14 23:11 start_atlas.sh
[2026-02-14 23:16:14] drwxrwx--x. 2 boinc boinc      4096 Feb 14 23:11 shared
[2026-02-14 23:16:14] -rw-r--r--. 2 boinc boinc    597954 Feb 14 23:11 input.tar.gz
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc         0 Feb 14 23:11 boinc_lockfile
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc      2549 Feb 14 23:11 pandaJob.out
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc   1000934 Feb 14 23:11 agis_schedconf.cvmfs.json
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc   1513015 Feb 14 23:11 agis_ddmendpoints.agis.ALL.json
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc       445 Feb 14 23:12 workernode_map.json
[2026-02-14 23:16:14] drwx------. 5 boinc boinc      4096 Feb 14 23:12 pilot3
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc       524 Feb 14 23:13 boinc_task_state.xml
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc       980 Feb 14 23:13 memory_monitor_summary.json
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc     21289 Feb 14 23:13 log.48508763._004759.job.log.tgz.1
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc      7058 Feb 14 23:15 heartbeat.json
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc        95 Feb 14 23:16 pilot_heartbeat.json
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc      8192 Feb 14 23:16 boinc_mmap_file
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc        22 Feb 14 23:16 wrapper_checkpoint.txt
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc      5004 Feb 14 23:16 pilotlog.txt
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc     86755 Feb 14 23:16 log.48508763._004759.job.log.1
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc       188 Feb 14 23:16 output.list
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc       620 Feb 14 23:16 runtime_log
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc    122880 Feb 14 23:16 result.tar.gz
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc      8635 Feb 14 23:16 runtime_log.err
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc       646 Feb 14 23:16 4bTKDmgwhB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8qoKDmsyUD6m.diag
[2026-02-14 23:16:14] -rw-r--r--. 1 boinc boinc     21847 Feb 14 23:16 stderr.txt
[2026-02-14 23:16:14] No HITS result produced
[2026-02-14 23:16:14]  *** Contents of shared directory: ***
[2026-02-14 23:16:14] total 668868
[2026-02-14 23:16:14] -rw-r--r--. 2 boinc boinc 684177018 Feb 14 23:11 ATLAS.root_0
[2026-02-14 23:16:14] -rw-r--r--. 2 boinc boinc     15845 Feb 14 23:11 start_atlas.sh
[2026-02-14 23:16:14] -rw-r--r--. 2 boinc boinc    597954 Feb 14 23:11 input.tar.gz
[2026-02-14 23:16:14] -rw-------. 1 boinc boinc    122880 Feb 14 23:16 result.tar.gz
23:16:15 (189215): run_atlas exited; CPU time 20.237746
23:16:15 (189215): called boinc_finish(0)

</stderr_txt>
]]>

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