Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:03:24 (983021): wrapper (7.7.26015): starting
15:03:24 (983021): wrapper: running run_atlas (--nthreads 2)
[2026-02-15 15:03:24] Arguments: --nthreads 2
[2026-02-15 15:03:24] Threads: 2
[2026-02-15 15:03:24] Checking for CVMFS
[2026-02-15 15:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-15 15:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-15 15:03:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-15 15:03:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-15 15:03:24] 2.9.2.0 915081 771 54636 156267 1 188 31478717 36864000 0 130560 0 205326 99.971 26098 23639 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-15 15:03:24] CVMFS is ok
[2026-02-15 15:03:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 15:03:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 15:03:24] Further information can be found at the LHC@home message board.
[2026-02-15 15:03:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 15:03:24] Checking for apptainer binary...
[2026-02-15 15:03:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-15 15:03:24] Running /usr/bin/apptainer --version
[2026-02-15 15:03:24] apptainer version 1.4.1-1.1
[2026-02-15 15:03:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 15:03:24] magicA244
[2026-02-15 15:03:24] apptainer works
[2026-02-15 15:03:25] Set ATHENA_PROC_NUMBER=2
[2026-02-15 15:03:25] Set ATHENA_CORE_NUMBER=2
[2026-02-15 15:03:25] Starting ATLAS job with PandaID=7011032015
[2026-02-15 15:03:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 17:17:06]  *** The last 200 lines of the pilot log: ***
[2026-02-15 17:17:06] 2026-02-15 16:16:38,064 | INFO     | [job] queue monitor thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,064 | INFO     | [job] retrieve thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,232 | INFO     | [data] control thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,313 | INFO     | all payload control threads have been joined
[2026-02-15 17:17:06] 2026-02-15 16:16:38,454 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,571 | INFO     | [job] validate thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,648 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,681 | INFO     | [payload] validate_post thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,704 | INFO     | job.realtimelogging is not enabled
[2026-02-15 17:17:06] 2026-02-15 16:16:38,851 | INFO     | [data] copytool_in thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,944 | INFO     | [job] control thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:38,945 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:39,319 | INFO     | [payload] control thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:39,338 | INFO     | [payload] failed_post thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:39,710 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:39,766 | INFO     | [data] copytool_out thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:40,380 | WARNING  | process 991452 can no longer be monitored (due to stat problems) - aborting
[2026-02-15 17:17:06] 2026-02-15 16:16:40,401 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 17:17:06] 2026-02-15 16:16:40,426 | INFO     | number of running child processes to parent process 991452: 1
[2026-02-15 17:17:06] 2026-02-15 16:16:40,427 | INFO     | maximum number of monitored processes: 6
[2026-02-15 17:17:06] 2026-02-15 16:16:40,427 | INFO     | aborting job monitoring since job object (job id=7011032015) has expired
[2026-02-15 17:17:06] 2026-02-15 16:16:40,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 17:17:06] 2026-02-15 16:16:40,427 | INFO     | will abort loop
[2026-02-15 17:17:06] 2026-02-15 16:16:41,063 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:41,432 | INFO     | [job] job monitor thread has finished
[2026-02-15 17:17:06] 2026-02-15 16:16:57,932 | INFO     | [monitor] cgroup control has ended
[2026-02-15 17:17:06] 2026-02-15 16:16:59,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730706732864)>', '<ExcThread(monitor, started 139729907476224)>']
[2026-02-15 17:17:06] 2026-02-15 16:17:04,927 | INFO     | all workflow threads have been joined
[2026-02-15 17:17:06] 2026-02-15 16:17:04,927 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 17:17:06] 2026-02-15 16:17:04,928 | INFO     | traces error code: 0
[2026-02-15 17:17:06] 2026-02-15 16:17:04,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | INFO     | PID=987047 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | CRITICAL | thread 'MainThread' is not alive
[2026-02-15 17:17:06] 2026-02-15 16:17:06,667 | INFO     | [monitor] control thread has ended
[2026-02-15 17:17:06] 2026-02-15 16:17:06,704 [wrapper] ==== pilot stdout END ====
[2026-02-15 17:17:06] 2026-02-15 16:17:06,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 17:17:06] 2026-02-15 16:17:06,708 [wrapper] pilotpid: 987047
[2026-02-15 17:17:06] 2026-02-15 16:17:06,710 [wrapper] Pilot exit status: 0
[2026-02-15 17:17:06] 2026-02-15 16:17:06,716 [wrapper] pandaids: 7011032015
[2026-02-15 17:17:06] 2026-02-15 16:17:06,728 [wrapper] cleanup supervisor_pilot  996379 987048
[2026-02-15 17:17:06] 2026-02-15 16:17:06,729 [wrapper] Test setup, not cleaning
[2026-02-15 17:17:06] 2026-02-15 16:17:06,731 [wrapper] apfmon messages muted
[2026-02-15 17:17:06] 2026-02-15 16:17:06,733 [wrapper] ==== wrapper stdout END ====
[2026-02-15 17:17:06] 2026-02-15 16:17:06,735 [wrapper] ==== wrapper stderr END ====
[2026-02-15 17:17:06]  *** Error codes and diagnostics ***
[2026-02-15 17:17:06]     "exeErrorCode": 0,
[2026-02-15 17:17:06]     "exeErrorDiag": "",
[2026-02-15 17:17:06]     "pilotErrorCode": 0,
[2026-02-15 17:17:06]     "pilotErrorDiag": "",
[2026-02-15 17:17:06]  *** Listing of results directory ***
[2026-02-15 17:17:06] total 670548
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc    584627 Feb 15 04:23 pilot3.tar.gz
[2026-02-15 17:17:06] -rwx------ 1 boinc boinc     36322 Feb 15 04:25 runpilot2-wrapper.sh
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc      5111 Feb 15 04:28 queuedata.json
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc       100 Feb 15 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 17:17:06] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 15:03 run_atlas
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc       105 Feb 15 15:03 job.xml
[2026-02-15 17:17:06] -rw-r--r-- 2 boinc boinc 496758831 Feb 15 15:03 EVNT.48318016._000258.pool.root.1
[2026-02-15 17:17:06] -rw-r--r-- 2 boinc boinc    597944 Feb 15 15:03 input.tar.gz
[2026-02-15 17:17:06] -rw-r--r-- 2 boinc boinc     15845 Feb 15 15:03 start_atlas.sh
[2026-02-15 17:17:06] drwxrwx--x 2 boinc boinc      4096 Feb 15 15:03 shared
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc         0 Feb 15 15:03 boinc_setup_complete
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc      6208 Feb 15 15:03 init_data.xml
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc         0 Feb 15 15:03 boinc_lockfile
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc      2522 Feb 15 15:03 pandaJob.out
[2026-02-15 17:17:06] -rw------- 1 boinc boinc   1000992 Feb 15 15:03 agis_schedconf.cvmfs.json
[2026-02-15 17:17:06] -rw------- 1 boinc boinc   1513015 Feb 15 15:03 agis_ddmendpoints.agis.ALL.json
[2026-02-15 17:17:06] -rw------- 1 boinc boinc       420 Feb 15 15:03 workernode_map.json
[2026-02-15 17:17:06] drwx------ 5 boinc boinc      4096 Feb 15 15:03 pilot3
[2026-02-15 17:17:06] -rw------- 1 boinc boinc 183134539 Feb 15 17:16 HITS.48318018._013323.pool.root.1
[2026-02-15 17:17:06] -rw------- 1 boinc boinc        95 Feb 15 17:16 pilot_heartbeat.json
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc       530 Feb 15 17:16 boinc_task_state.xml
[2026-02-15 17:17:06] -rw------- 1 boinc boinc      1013 Feb 15 17:16 memory_monitor_summary.json
[2026-02-15 17:17:06] -rw------- 1 boinc boinc    275230 Feb 15 17:16 log.48318018._013323.job.log.tgz.1
[2026-02-15 17:17:06] -rw------- 1 boinc boinc      6294 Feb 15 17:16 heartbeat.json
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc      8192 Feb 15 17:16 boinc_mmap_file
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc        27 Feb 15 17:16 wrapper_checkpoint.txt
[2026-02-15 17:17:06] -rw------- 1 boinc boinc       816 Feb 15 17:17 pilotlog.txt
[2026-02-15 17:17:06] -rw------- 1 boinc boinc   1142246 Feb 15 17:17 log.48318018._013323.job.log.1
[2026-02-15 17:17:06] -rw------- 1 boinc boinc       357 Feb 15 17:17 output.list
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc       620 Feb 15 17:17 runtime_log
[2026-02-15 17:17:06] -rw------- 1 boinc boinc   1433600 Feb 15 17:17 result.tar.gz
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc      8911 Feb 15 17:17 runtime_log.err
[2026-02-15 17:17:06] -rw------- 1 boinc boinc       660 Feb 15 17:17 hntMDmGwhB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLsnKDm7woEkn.diag
[2026-02-15 17:17:06] -rw-r--r-- 1 boinc boinc      7418 Feb 15 17:17 stderr.txt
[2026-02-15 17:17:06] HITS file was successfully produced:
[2026-02-15 17:17:06] -rw------- 1 boinc boinc 183134539 Feb 15 17:16 shared/HITS.pool.root.1
[2026-02-15 17:17:06]  *** Contents of shared directory: ***
[2026-02-15 17:17:06] total 665972
[2026-02-15 17:17:06] -rw-r--r-- 2 boinc boinc 496758831 Feb 15 15:03 ATLAS.root_0
[2026-02-15 17:17:06] -rw-r--r-- 2 boinc boinc    597944 Feb 15 15:03 input.tar.gz
[2026-02-15 17:17:06] -rw-r--r-- 2 boinc boinc     15845 Feb 15 15:03 start_atlas.sh
[2026-02-15 17:17:06] -rw------- 1 boinc boinc 183134539 Feb 15 17:16 HITS.pool.root.1
[2026-02-15 17:17:06] -rw------- 1 boinc boinc   1433600 Feb 15 17:17 result.tar.gz
17:17:08 (983021): run_atlas exited; CPU time 15531.976955
17:17:08 (983021): called boinc_finish(0)

</stderr_txt>
]]>

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