Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:33:53 (264547): wrapper (7.7.26015): starting
14:33:53 (264547): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 14:33:53] Arguments: --nthreads 4
[2026-02-15 14:33:53] Threads: 4
[2026-02-15 14:33:53] Checking for CVMFS
[2026-02-15 14:33:53] No cvmfs_config command found, will try listing directly
[2026-02-15 14:33:53] CVMFS is ok
[2026-02-15 14:33:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 14:33:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 14:33:53] Further information can be found at the LHC@home message board.
[2026-02-15 14:33:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 14:33:53] Checking for apptainer binary...
[2026-02-15 14:33:53] which: no apptainer in ((null))
[2026-02-15 14:33:53] apptainer is not installed, using version from CVMFS
[2026-02-15 14:33:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 14:33:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-15 14:33:54] apptainer works
[2026-02-15 14:33:54] Set ATHENA_PROC_NUMBER=4
[2026-02-15 14:33:54] Set ATHENA_CORE_NUMBER=4
[2026-02-15 14:33:54] Starting ATLAS job with PandaID=7010390631
[2026-02-15 14:33:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 18:37:50]  *** The last 200 lines of the pilot log: ***
[2026-02-15 18:37:50] 2026-02-15 17:36:42,264 | INFO     | mean x: 1771169870.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,264 | INFO     | mean y: 2348423.47639485
[2026-02-15 18:37:50] 2026-02-15 17:36:42,264 | INFO     | intersect: -3879302491.0769997
[2026-02-15 18:37:50] 2026-02-15 17:36:42,264 | INFO     | chi2: 0.00967413456823589
[2026-02-15 18:37:50] 2026-02-15 17:36:42,264 | INFO     | current chi2=0.00967413456823589 (change=99.29921630529763 %)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,265 | INFO     | sum of square deviations: 3675146117.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,266 | INFO     | sum of deviations: 5549115526.999999
[2026-02-15 18:37:50] 2026-02-15 17:36:42,266 | INFO     | mean x: 1771170022.5
[2026-02-15 18:37:50] 2026-02-15 17:36:42,266 | INFO     | mean y: 2350291.6666666665
[2026-02-15 18:37:50] 2026-02-15 17:36:42,267 | INFO     | intersect: -2671945303.6427727
[2026-02-15 18:37:50] 2026-02-15 17:36:42,267 | INFO     | chi2: 0.0016922451559819535
[2026-02-15 18:37:50] 2026-02-15 17:36:42,267 | INFO     | current chi2=0.0016922451559819535 (change=82.50752928806385 %)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,267 | INFO     | sum of square deviations: 3438620752.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,269 | INFO     | sum of deviations: 4059764659.0000005
[2026-02-15 18:37:50] 2026-02-15 17:36:42,269 | INFO     | mean x: 1771170175.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,269 | INFO     | mean y: 2351251.4170403588
[2026-02-15 18:37:50] 2026-02-15 17:36:42,269 | INFO     | intersect: -2088758702.292634
[2026-02-15 18:37:50] 2026-02-15 17:36:42,270 | INFO     | chi2: 0.0006289982124909717
[2026-02-15 18:37:50] 2026-02-15 17:36:42,270 | INFO     | current chi2=0.0006289982124909717 (change=62.83055027414246 %)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,270 | INFO     | sum of square deviations: 3212467674.5
[2026-02-15 18:37:50] 2026-02-15 17:36:42,272 | INFO     | sum of deviations: 3124006389.4999995
[2026-02-15 18:37:50] 2026-02-15 17:36:42,272 | INFO     | mean x: 1771170327.5
[2026-02-15 18:37:50] 2026-02-15 17:36:42,272 | INFO     | mean y: 2351880.7018348626
[2026-02-15 18:37:50] 2026-02-15 17:36:42,272 | INFO     | intersect: -1720045970.6209822
[2026-02-15 18:37:50] 2026-02-15 17:36:42,273 | INFO     | chi2: 0.00020343332454457913
[2026-02-15 18:37:50] 2026-02-15 17:36:42,273 | INFO     | current chi2=0.00020343332454457913 (change=67.6575671433249 %)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,273 | INFO     | sum of square deviations: 2996454322.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,274 | INFO     | sum of deviations: 2651946634.9999995
[2026-02-15 18:37:50] 2026-02-15 17:36:42,275 | INFO     | mean x: 1771170480.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,275 | INFO     | mean y: 2352212.4507042253
[2026-02-15 18:37:50] 2026-02-15 17:36:42,275 | INFO     | intersect: -1565183644.8328676
[2026-02-15 18:37:50] 2026-02-15 17:36:42,275 | INFO     | chi2: 0.00011423482244113033
[2026-02-15 18:37:50] 2026-02-15 17:36:42,275 | INFO     | current chi2=0.00011423482244113033 (change=43.84655380485727 %)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,275 | INFO     | sum of square deviations: 2790348132.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,277 | INFO     | sum of deviations: 2360178084.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,277 | INFO     | mean x: 1771170632.5
[2026-02-15 18:37:50] 2026-02-15 17:36:42,277 | INFO     | mean y: 2352428.2596153845
[2026-02-15 18:37:50] 2026-02-15 17:36:42,277 | INFO     | intersect: -1495768204.7578413
[2026-02-15 18:37:50] 2026-02-15 17:36:42,277 | INFO     | chi2: 0.0001027869426906437
[2026-02-15 18:37:50] 2026-02-15 17:36:42,278 | INFO     | current chi2=0.0001027869426906437 (change=10.021357328573052 %)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,278 | INFO     | left removable region: 60
[2026-02-15 18:37:50] 2026-02-15 17:36:42,278 | INFO     | sum of square deviations: 1577789583.0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,279 | INFO     | sum of deviations: 1035511630.4999999
[2026-02-15 18:37:50] 2026-02-15 17:36:42,279 | INFO     | mean x: 1771171364.5
[2026-02-15 18:37:50] 2026-02-15 17:36:42,279 | INFO     | mean y: 2353430.145348837
[2026-02-15 18:37:50] 2026-02-15 17:36:42,280 | INFO     | intersect: -1160075684.173569
[2026-02-15 18:37:50] 2026-02-15 17:36:42,280 | INFO     | chi2: 2.50739695483153e-05
[2026-02-15 18:37:50] 2026-02-15 17:36:42,280 | INFO     | current memory leak: 0.66 B/s (using 172 data points, chi2=0.00)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | could have reported an average CPU frequency of 2675 MHz (12 samples)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | ..............................
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . Timing measurements:
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . get job = 0 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . initial setup = 10 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . payload setup = 10 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . stage-in = 0 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . payload execution = 14511 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,281 | INFO     | . stage-out = 1 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,282 | INFO     | . log creation = 0 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,282 | INFO     | ..............................
[2026-02-15 18:37:50] 2026-02-15 17:36:42,294 | INFO     | time since job start (14543s) is within the limit (349056.0s)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,422 | INFO     | 
[2026-02-15 18:37:50] 2026-02-15 17:36:42,422 | INFO     | job summary report
[2026-02-15 18:37:50] 2026-02-15 17:36:42,422 | INFO     | --------------------------------------------------
[2026-02-15 18:37:50] 2026-02-15 17:36:42,422 | INFO     | PanDA job id: 7010390631
[2026-02-15 18:37:50] 2026-02-15 17:36:42,422 | INFO     | task id: 48610874
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | errors: (none)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | pilot state: finished 
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | transexitcode: 0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | exeerrorcode: 0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | exeerrordiag: 
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | exitcode: 0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | exitmsg: OK
[2026-02-15 18:37:50] 2026-02-15 17:36:42,423 | INFO     | cpuconsumptiontime: 55620 s
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | nevents: 400
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | neventsw: 0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | pid: 274159
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | pgrp: 274159
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | corecount: 4
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | event service: False
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | sizes: {0: 2282268, 11: 2282268, 14525: 2313658, 14527: 2322678, 14531: 2322928}
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | --------------------------------------------------
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | 
[2026-02-15 18:37:50] 2026-02-15 17:36:42,424 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2026-02-15 18:37:50] 2026-02-15 17:36:42,461 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,463 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,464 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 18:37:50] 2026-02-15 17:36:42,464 | INFO     | job 7010390631 has completed (purged errors)
[2026-02-15 18:37:50] 2026-02-15 17:36:42,464 | INFO     | overall cleanup function is called
[2026-02-15 18:37:50] 2026-02-15 17:36:42,948 | INFO     | number of running child processes to parent process 274159: 1
[2026-02-15 18:37:50] 2026-02-15 17:36:42,948 | INFO     | maximum number of monitored processes: 6
[2026-02-15 18:37:50] 2026-02-15 17:36:42,948 | INFO     | aborting job monitoring since job object (job id=7010390631) has expired
[2026-02-15 18:37:50] 2026-02-15 17:36:43,474 | INFO     | --- collectZombieJob: --- 10, [274159]
[2026-02-15 18:37:50] 2026-02-15 17:36:43,475 | INFO     | zombie collector waiting for pid 274159
[2026-02-15 18:37:50] 2026-02-15 17:36:43,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 18:37:50] 2026-02-15 17:36:43,475 | INFO     | collected zombie processes
[2026-02-15 18:37:50] 2026-02-15 17:36:43,475 | INFO     | will attempt to kill all subprocesses of pid=274159
[2026-02-15 18:37:50] 2026-02-15 17:36:44,226 | INFO     | process IDs to be killed: [274159] (in reverse order)
[2026-02-15 18:37:50] 2026-02-15 17:36:44,516 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 18:37:50] 2026-02-15 17:36:44,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 18:37:50] 2026-02-15 17:36:44,542 | INFO     | did not find any defunct processes belonging to 274159
[2026-02-15 18:37:50] 2026-02-15 17:36:44,564 | INFO     | did not find any defunct processes belonging to 274159
[2026-02-15 18:37:50] 2026-02-15 17:36:44,564 | INFO     | ready for new job
[2026-02-15 18:37:50] 2026-02-15 17:36:44,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 18:37:50] 2026-02-15 17:36:44,567 | INFO     | **************************************
[2026-02-15 18:37:50] 2026-02-15 17:36:44,567 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 18:37:50] 2026-02-15 17:36:44,567 | INFO     | **************************************
[2026-02-15 18:37:50] 2026-02-15 17:36:44,567 | INFO     | 
[2026-02-15 18:37:50] 2026-02-15 17:36:44,575 | INFO     | architecture information:
[2026-02-15 18:37:50] 2026-02-15 17:36:44,576 | INFO     | executing command: cat /etc/os-release
[2026-02-15 18:37:50] 2026-02-15 17:36:44,597 | INFO     | cat /etc/os-release:
[2026-02-15 18:37:50] NAME="CentOS Linux"
[2026-02-15 18:37:50] VERSION="7 (Core)"
[2026-02-15 18:37:50] ID="centos"
[2026-02-15 18:37:50] ID_LIKE="rhel fedora"
[2026-02-15 18:37:50] VERSION_ID="7"
[2026-02-15 18:37:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 18:37:50] ANSI_COLOR="0;31"
[2026-02-15 18:37:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 18:37:50] HOME_URL="https://www.centos.org/"
[2026-02-15 18:37:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 18:37:50] 
[2026-02-15 18:37:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 18:37:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 18:37:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 18:37:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 18:37:50] 
[2026-02-15 18:37:50] 2026-02-15 17:36:44,597 | INFO     | **************************************
[2026-02-15 18:37:50] 2026-02-15 17:36:45,100 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-02-15 18:37:50] 2026-02-15 17:36:45,122 | INFO     | sufficient remaining disk space (3200043188224 B)
[2026-02-15 18:37:50] 2026-02-15 17:36:45,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 18:37:50] 2026-02-15 17:36:45,123 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 18:37:50] 2026-02-15 17:36:45,123 | INFO     | update_server=False
[2026-02-15 18:37:50] 2026-02-15 17:36:45,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 18:37:50] 2026-02-15 17:36:45,451 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-15 18:37:50] 2026-02-15 17:36:45,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-15 18:37:50] 2026-02-15 17:36:45,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 18:37:50] 2026-02-15 17:36:45,451 | INFO     | will abort loop
[2026-02-15 18:37:50] 2026-02-15 17:36:45,523 | INFO     | all payload control threads have been joined
[2026-02-15 18:37:50] 2026-02-15 17:36:45,639 | INFO     | all data control threads have been joined
[2026-02-15 18:37:50] 2026-02-15 17:36:46,128 | INFO     | [job] retrieve thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 18:37:50] 2026-02-15 17:36:46,457 | INFO     | [job] job monitor thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,528 | INFO     | [payload] control thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,644 | INFO     | [data] control thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,721 | INFO     | all job control threads have been joined
[2026-02-15 18:37:50] 2026-02-15 17:36:46,781 | INFO     | [payload] validate_post thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,788 | INFO     | [job] validate thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:46,886 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:47,292 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:47,427 | INFO     | [payload] failed_post thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:47,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 18:37:50] 2026-02-15 17:36:47,528 | INFO     | [data] copytool_in thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:47,596 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:47,726 | INFO     | [job] control thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:47,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 18:37:50] 2026-02-15 17:36:48,363 | INFO     | [data] copytool_out thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:48,441 | INFO     | [job] queue monitor thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:36:51,804 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 18:37:50] 2026-02-15 17:37:16,246 | INFO     | PID=268586 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-15 18:37:50] 2026-02-15 17:37:16,246 | INFO     | .. there are 24 such processes running
[2026-02-15 18:37:50] 2026-02-15 17:37:16,246 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 18:37:50] 2026-02-15 17:37:16,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 18:37:50] 2026-02-15 17:37:16,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 18:37:50] 2026-02-15 17:37:43,265 | INFO     | [monitor] cgroup control has ended
[2026-02-15 18:37:50] 2026-02-15 17:37:44,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22478709155648)>', '<ExcThread(monitor, started 22478459229952)>']
[2026-02-15 18:37:50] 2026-02-15 17:37:45,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 18:37:50] 2026-02-15 17:37:45,389 | INFO     | [monitor] control thread has ended
[2026-02-15 18:37:50] 2026-02-15 17:37:49,641 | INFO     | all workflow threads have been joined
[2026-02-15 18:37:50] 2026-02-15 17:37:49,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 18:37:50] 2026-02-15 17:37:49,642 | INFO     | traces error code: 0
[2026-02-15 18:37:50] 2026-02-15 17:37:49,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 18:37:50] 2026-02-15 17:37:49,804 [wrapper] ==== pilot stdout END ====
[2026-02-15 18:37:50] 2026-02-15 17:37:49,809 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 18:37:50] 2026-02-15 17:37:49,816 [wrapper] pilotpid: 268586
[2026-02-15 18:37:50] 2026-02-15 17:37:49,821 [wrapper] Pilot exit status: 0
[2026-02-15 18:37:50] 2026-02-15 17:37:49,869 [wrapper] pandaids: 7010390631
[2026-02-15 18:37:50] 2026-02-15 17:37:50,068 [wrapper] cleanup supervisor_pilot  845688 268587
[2026-02-15 18:37:50] 2026-02-15 17:37:50,073 [wrapper] Test setup, not cleaning
[2026-02-15 18:37:50] 2026-02-15 17:37:50,077 [wrapper] apfmon messages muted
[2026-02-15 18:37:50] 2026-02-15 17:37:50,081 [wrapper] ==== wrapper stdout END ====
[2026-02-15 18:37:50] 2026-02-15 17:37:50,085 [wrapper] ==== wrapper stderr END ====
[2026-02-15 18:37:50]  *** Error codes and diagnostics ***
[2026-02-15 18:37:50]     "exeErrorCode": 0,
[2026-02-15 18:37:50]     "exeErrorDiag": "",
[2026-02-15 18:37:50]     "pilotErrorCode": 0,
[2026-02-15 18:37:50]     "pilotErrorDiag": "",
[2026-02-15 18:37:50]  *** Listing of results directory ***
[2026-02-15 18:37:50] total 472100
[2026-02-15 18:37:50] -rwx------ 1 boinc boinc     36322 Feb 15 00:42 runpilot2-wrapper.sh
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc    584627 Feb 15 00:42 pilot3.tar.gz
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc      5111 Feb 15 00:43 queuedata.json
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc       100 Feb 15 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 18:37:50] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 14:33 run_atlas
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc       105 Feb 15 14:33 job.xml
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc      6694 Feb 15 14:33 init_data.xml
[2026-02-15 18:37:50] -rw-r--r-- 2 boinc boinc 283742317 Feb 15 14:33 EVNT.48610872._000036.pool.root.1
[2026-02-15 18:37:50] -rw-r--r-- 2 boinc boinc     15845 Feb 15 14:33 start_atlas.sh
[2026-02-15 18:37:50] drwxrwx--x 2 boinc boinc      4096 Feb 15 14:33 shared
[2026-02-15 18:37:50] -rw-r--r-- 2 boinc boinc    597944 Feb 15 14:33 input.tar.gz
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc         0 Feb 15 14:33 boinc_lockfile
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc      2552 Feb 15 14:33 pandaJob.out
[2026-02-15 18:37:50] -rw------- 1 boinc boinc   1000992 Feb 15 14:34 agis_schedconf.cvmfs.json
[2026-02-15 18:37:50] -rw------- 1 boinc boinc       442 Feb 15 14:34 workernode_map.json
[2026-02-15 18:37:50] drwx------ 5 boinc boinc      4096 Feb 15 14:34 pilot3
[2026-02-15 18:37:50] -rw------- 1 boinc boinc 190839718 Feb 15 18:36 HITS.48610874._000849.pool.root.1
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc       530 Feb 15 18:36 boinc_task_state.xml
[2026-02-15 18:37:50] -rw------- 1 boinc boinc      1032 Feb 15 18:36 memory_monitor_summary.json
[2026-02-15 18:37:50] -rw------- 1 boinc boinc        95 Feb 15 18:36 pilot_heartbeat.json
[2026-02-15 18:37:50] -rw------- 1 boinc boinc   1513015 Feb 15 18:36 agis_ddmendpoints.agis.ALL.json
[2026-02-15 18:37:50] -rw------- 1 boinc boinc    421870 Feb 15 18:36 log.48610874._000849.job.log.tgz.1
[2026-02-15 18:37:50] -rw------- 1 boinc boinc      6364 Feb 15 18:36 heartbeat.json
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc      8192 Feb 15 18:37 boinc_mmap_file
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc        28 Feb 15 18:37 wrapper_checkpoint.txt
[2026-02-15 18:37:50] -rw------- 1 boinc boinc      5017 Feb 15 18:37 pilotlog.txt
[2026-02-15 18:37:50] -rw------- 1 boinc boinc   2034764 Feb 15 18:37 log.48610874._000849.job.log.1
[2026-02-15 18:37:50] -rw------- 1 boinc boinc       357 Feb 15 18:37 output.list
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc       620 Feb 15 18:37 runtime_log
[2026-02-15 18:37:50] -rw------- 1 boinc boinc   2478080 Feb 15 18:37 result.tar.gz
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc      9205 Feb 15 18:37 runtime_log.err
[2026-02-15 18:37:50] -rw------- 1 boinc boinc       663 Feb 15 18:37 CB2NDmYSeB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRQoKDmCkzOAo.diag
[2026-02-15 18:37:50] -rw-r--r-- 1 boinc boinc     20839 Feb 15 18:37 stderr.txt
[2026-02-15 18:37:50] HITS file was successfully produced:
[2026-02-15 18:37:50] -rw------- 1 boinc boinc 190839718 Feb 15 18:36 shared/HITS.pool.root.1
[2026-02-15 18:37:50]  *** Contents of shared directory: ***
[2026-02-15 18:37:50] total 466492
[2026-02-15 18:37:50] -rw-r--r-- 2 boinc boinc 283742317 Feb 15 14:33 ATLAS.root_0
[2026-02-15 18:37:50] -rw-r--r-- 2 boinc boinc     15845 Feb 15 14:33 start_atlas.sh
[2026-02-15 18:37:50] -rw-r--r-- 2 boinc boinc    597944 Feb 15 14:33 input.tar.gz
[2026-02-15 18:37:50] -rw------- 1 boinc boinc 190839718 Feb 15 18:36 HITS.pool.root.1
[2026-02-15 18:37:50] -rw------- 1 boinc boinc   2478080 Feb 15 18:37 result.tar.gz
18:37:51 (264547): run_atlas exited; CPU time 56489.512896
18:37:51 (264547): called boinc_finish(0)

</stderr_txt>
]]>

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