Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:45:06 (1506629): wrapper (7.7.26015): starting
08:45:06 (1506629): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 08:45:06] Arguments: --nthreads 4
[2026-02-15 08:45:06] Threads: 4
[2026-02-15 08:45:06] Checking for CVMFS
[2026-02-15 08:45:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-15 08:45:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-15 08:45:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-15 08:45:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-15 08:45:09] 2.9.2.0 1407057 518 74264 156261 2 50 25333602 36864000 0 130560 0 278610 99.985 21776 20466 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-15 08:45:09] CVMFS is ok
[2026-02-15 08:45:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 08:45:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 08:45:09] Further information can be found at the LHC@home message board.
[2026-02-15 08:45:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 08:45:09] Checking for apptainer binary...
[2026-02-15 08:45:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-15 08:45:09] Running /usr/bin/apptainer --version
[2026-02-15 08:45:09] apptainer version 1.4.1-1.1
[2026-02-15 08:45:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 08:45:09] magicA244a
[2026-02-15 08:45:09] apptainer works
[2026-02-15 08:45:09] Set ATHENA_PROC_NUMBER=4
[2026-02-15 08:45:09] Set ATHENA_CORE_NUMBER=4
[2026-02-15 08:45:09] Starting ATLAS job with PandaID=7010294871
[2026-02-15 08:45:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 09:42:35]  *** The last 200 lines of the pilot log: ***
[2026-02-15 09:42:35] 2026-02-15 08:42:02,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | job 7010294871 has completed (purged errors)
[2026-02-15 09:42:35] 2026-02-15 08:42:02,832 | INFO     | overall cleanup function is called
[2026-02-15 09:42:35] 2026-02-15 08:42:03,839 | INFO     | --- collectZombieJob: --- 10, [1515271]
[2026-02-15 09:42:35] 2026-02-15 08:42:03,839 | INFO     | zombie collector waiting for pid 1515271
[2026-02-15 09:42:35] 2026-02-15 08:42:03,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 09:42:35] 2026-02-15 08:42:03,839 | INFO     | collected zombie processes
[2026-02-15 09:42:35] 2026-02-15 08:42:03,839 | INFO     | will attempt to kill all subprocesses of pid=1515271
[2026-02-15 09:42:35] 2026-02-15 08:42:03,884 | INFO     | process IDs to be killed: [1515271] (in reverse order)
[2026-02-15 09:42:35] 2026-02-15 08:42:03,910 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 09:42:35] 2026-02-15 08:42:03,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 09:42:35] 2026-02-15 08:42:03,911 | INFO     | did not find any defunct processes belonging to 1515271
[2026-02-15 09:42:35] 2026-02-15 08:42:03,912 | INFO     | did not find any defunct processes belonging to 1515271
[2026-02-15 09:42:35] 2026-02-15 08:42:03,912 | INFO     | ready for new job
[2026-02-15 09:42:35] 2026-02-15 08:42:03,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 09:42:35] 2026-02-15 08:42:03,913 | INFO     | **************************************
[2026-02-15 09:42:35] 2026-02-15 08:42:03,913 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 09:42:35] 2026-02-15 08:42:03,913 | INFO     | **************************************
[2026-02-15 09:42:35] 2026-02-15 08:42:03,913 | INFO     | 
[2026-02-15 09:42:35] 2026-02-15 08:42:03,914 | INFO     | architecture information:
[2026-02-15 09:42:35] 2026-02-15 08:42:03,914 | INFO     | executing command: cat /etc/os-release
[2026-02-15 09:42:35] 2026-02-15 08:42:03,923 | INFO     | cat /etc/os-release:
[2026-02-15 09:42:35] NAME="CentOS Linux"
[2026-02-15 09:42:35] VERSION="7 (Core)"
[2026-02-15 09:42:35] ID="centos"
[2026-02-15 09:42:35] ID_LIKE="rhel fedora"
[2026-02-15 09:42:35] VERSION_ID="7"
[2026-02-15 09:42:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 09:42:35] ANSI_COLOR="0;31"
[2026-02-15 09:42:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 09:42:35] HOME_URL="https://www.centos.org/"
[2026-02-15 09:42:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 09:42:35] 
[2026-02-15 09:42:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 09:42:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 09:42:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 09:42:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 09:42:35] 
[2026-02-15 09:42:35] 2026-02-15 08:42:03,923 | INFO     | **************************************
[2026-02-15 09:42:35] 2026-02-15 08:42:04,427 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | INFO     | sufficient remaining disk space (331562876928 B)
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | INFO     | update_server=False
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 09:42:35] 2026-02-15 08:42:04,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 09:42:35] 2026-02-15 08:42:04,563 | INFO     | all payload control threads have been joined
[2026-02-15 09:42:35] 2026-02-15 08:42:04,826 | INFO     | all data control threads have been joined
[2026-02-15 09:42:35] 2026-02-15 08:42:05,137 | INFO     | all job control threads have been joined
[2026-02-15 09:42:35] 2026-02-15 08:42:05,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 09:42:35] 2026-02-15 08:42:05,377 | INFO     | aborting loop
[2026-02-15 09:42:35] 2026-02-15 08:42:05,446 | INFO     | [job] queue monitor thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:05,446 | INFO     | [job] retrieve thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:05,505 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:05,569 | INFO     | [payload] control thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:05,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 09:42:35] 2026-02-15 08:42:05,672 | INFO     | [payload] failed_post thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:05,831 | INFO     | [data] control thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,130 | INFO     | [job] validate thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,143 | INFO     | [job] control thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,179 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,205 | INFO     | [payload] validate_post thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,295 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,350 | INFO     | [data] copytool_in thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,382 | INFO     | [job] job monitor thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:06,573 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:07,635 | INFO     | [data] copytool_out thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:08,448 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 09:42:35] 2026-02-15 08:42:23,377 | INFO     | [monitor] cgroup control has ended
[2026-02-15 09:42:35] 2026-02-15 08:42:25,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097599571776)>', '<ExcThread(monitor, started 140096665810688)>']
[2026-02-15 09:42:35] 2026-02-15 08:42:30,129 | INFO     | all workflow threads have been joined
[2026-02-15 09:42:35] 2026-02-15 08:42:30,129 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 09:42:35] 2026-02-15 08:42:30,129 | INFO     | traces error code: 0
[2026-02-15 09:42:35] 2026-02-15 08:42:30,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 09:42:35] 2026-02-15 08:42:35,229 | INFO     | PID=1510760 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-15 09:42:35] 2026-02-15 08:42:35,230 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 09:42:35] 2026-02-15 08:42:35,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 09:42:35] 2026-02-15 08:42:35,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 09:42:35] 2026-02-15 08:42:35,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 09:42:35] 2026-02-15 08:42:35,230 | INFO     | [monitor] control thread has ended
[2026-02-15 09:42:35] 2026-02-15 08:42:35,280 [wrapper] ==== pilot stdout END ====
[2026-02-15 09:42:35] 2026-02-15 08:42:35,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 09:42:35] 2026-02-15 08:42:35,285 [wrapper] pilotpid: 1510760
[2026-02-15 09:42:35] 2026-02-15 08:42:35,287 [wrapper] Pilot exit status: 0
[2026-02-15 09:42:35] 2026-02-15 08:42:35,295 [wrapper] pandaids: 7010294871
[2026-02-15 09:42:35] 2026-02-15 08:42:35,313 [wrapper] cleanup supervisor_pilot 1520349 1510761
[2026-02-15 09:42:35] 2026-02-15 08:42:35,316 [wrapper] Test setup, not cleaning
[2026-02-15 09:42:35] 2026-02-15 08:42:35,318 [wrapper] apfmon messages muted
[2026-02-15 09:42:35] 2026-02-15 08:42:35,321 [wrapper] ==== wrapper stdout END ====
[2026-02-15 09:42:35] 2026-02-15 08:42:35,323 [wrapper] ==== wrapper stderr END ====
[2026-02-15 09:42:35]  *** Error codes and diagnostics ***
[2026-02-15 09:42:35]     "exeErrorCode": 0,
[2026-02-15 09:42:35]     "exeErrorDiag": "",
[2026-02-15 09:42:35]     "pilotErrorCode": 0,
[2026-02-15 09:42:35]     "pilotErrorDiag": "",
[2026-02-15 09:42:35]  *** Listing of results directory ***
[2026-02-15 09:42:35] total 667752
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc    584627 Feb 15 00:03 pilot3.tar.gz
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc      5111 Feb 15 00:41 queuedata.json
[2026-02-15 09:42:35] -rwx------ 1 boinc boinc     36322 Feb 15 00:41 runpilot2-wrapper.sh
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc       100 Feb 15 08:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 09:42:35] -rwxr-xr-x 1 boinc boinc      7986 Feb 15 08:45 run_atlas
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc       105 Feb 15 08:45 job.xml
[2026-02-15 09:42:35] -rw-r--r-- 2 boinc boinc 497941172 Feb 15 08:45 EVNT.48310747._000191.pool.root.1
[2026-02-15 09:42:35] -rw-r--r-- 2 boinc boinc    597963 Feb 15 08:45 input.tar.gz
[2026-02-15 09:42:35] -rw-r--r-- 2 boinc boinc     15845 Feb 15 08:45 start_atlas.sh
[2026-02-15 09:42:35] drwxrwx--x 2 boinc boinc      4096 Feb 15 08:45 shared
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc         0 Feb 15 08:45 boinc_setup_complete
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc      6438 Feb 15 08:45 init_data.xml
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc         0 Feb 15 08:45 boinc_lockfile
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc      2524 Feb 15 08:45 pandaJob.out
[2026-02-15 09:42:35] -rw------- 1 boinc boinc   1000934 Feb 15 08:45 agis_schedconf.cvmfs.json
[2026-02-15 09:42:35] -rw------- 1 boinc boinc   1513015 Feb 15 08:45 agis_ddmendpoints.agis.ALL.json
[2026-02-15 09:42:35] -rw------- 1 boinc boinc       426 Feb 15 08:45 workernode_map.json
[2026-02-15 09:42:35] drwx------ 5 boinc boinc      4096 Feb 15 08:45 pilot3
[2026-02-15 09:42:35] -rw------- 1 boinc boinc 180338293 Feb 15 09:41 HITS.48310749._011123.pool.root.1
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc       530 Feb 15 09:41 boinc_task_state.xml
[2026-02-15 09:42:35] -rw------- 1 boinc boinc      1015 Feb 15 09:41 memory_monitor_summary.json
[2026-02-15 09:42:35] -rw------- 1 boinc boinc    273917 Feb 15 09:42 log.48310749._011123.job.log.tgz.1
[2026-02-15 09:42:35] -rw------- 1 boinc boinc      6306 Feb 15 09:42 heartbeat.json
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc      8192 Feb 15 09:42 boinc_mmap_file
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc        27 Feb 15 09:42 wrapper_checkpoint.txt
[2026-02-15 09:42:35] -rw------- 1 boinc boinc        95 Feb 15 09:42 pilot_heartbeat.json
[2026-02-15 09:42:35] -rw------- 1 boinc boinc       747 Feb 15 09:42 pilotlog.txt
[2026-02-15 09:42:35] -rw------- 1 boinc boinc    514607 Feb 15 09:42 log.48310749._011123.job.log.1
[2026-02-15 09:42:35] -rw------- 1 boinc boinc       357 Feb 15 09:42 output.list
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc       620 Feb 15 09:42 runtime_log
[2026-02-15 09:42:35] -rw------- 1 boinc boinc    808960 Feb 15 09:42 result.tar.gz
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc      8916 Feb 15 09:42 runtime_log.err
[2026-02-15 09:42:35] -rw------- 1 boinc boinc       661 Feb 15 09:42 bRSLDmeReB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgIoKDmEUDuun.diag
[2026-02-15 09:42:35] -rw-r--r-- 1 boinc boinc     12546 Feb 15 09:42 stderr.txt
[2026-02-15 09:42:35] HITS file was successfully produced:
[2026-02-15 09:42:35] -rw------- 1 boinc boinc 180338293 Feb 15 09:41 shared/HITS.pool.root.1
[2026-02-15 09:42:35]  *** Contents of shared directory: ***
[2026-02-15 09:42:35] total 663784
[2026-02-15 09:42:35] -rw-r--r-- 2 boinc boinc 497941172 Feb 15 08:45 ATLAS.root_0
[2026-02-15 09:42:35] -rw-r--r-- 2 boinc boinc    597963 Feb 15 08:45 input.tar.gz
[2026-02-15 09:42:35] -rw-r--r-- 2 boinc boinc     15845 Feb 15 08:45 start_atlas.sh
[2026-02-15 09:42:35] -rw------- 1 boinc boinc 180338293 Feb 15 09:41 HITS.pool.root.1
[2026-02-15 09:42:35] -rw------- 1 boinc boinc    808960 Feb 15 09:42 result.tar.gz
09:42:36 (1506629): run_atlas exited; CPU time 12587.639407
09:42:36 (1506629): called boinc_finish(0)

</stderr_txt>
]]>

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