Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:07:23 (19218): wrapper (7.7.26015): starting
07:07:23 (19218): wrapper: running run_atlas (--nthreads 8)
[2026-02-15 07:07:23] Arguments: --nthreads 8
[2026-02-15 07:07:23] Threads: 8
[2026-02-15 07:07:23] Checking for CVMFS
[2026-02-15 07:07:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-15 07:07:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-15 07:07:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-15 07:07:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-15 07:07:28] 2.11.2.0 1076 88316 110288 156258 1 250 12959993 25165824 4765 130560 0 37623463 99.817 30525779 3231 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-15 07:07:28] CVMFS is ok
[2026-02-15 07:07:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 07:07:28] Checking for apptainer binary...
[2026-02-15 07:07:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-15 07:07:28] Running /usr/bin/apptainer --version
[2026-02-15 07:07:28] apptainer version 1.3.2-1.el7
[2026-02-15 07:07:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 07:07:45] cg-vwn456.simple-grid.lan
[2026-02-15 07:07:45] apptainer works
[2026-02-15 07:07:45] Set ATHENA_PROC_NUMBER=8
[2026-02-15 07:07:45] Set ATHENA_CORE_NUMBER=8
[2026-02-15 07:07:46] Starting ATLAS job with PandaID=7009896807
[2026-02-15 07:07:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 12:39:47]  *** The last 200 lines of the pilot log: ***
[2026-02-15 12:39:47] 2026-02-15 11:38:40,661 | INFO     | total number of processed events: 400 (read)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,663 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7009896807/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,663 | INFO     | extracted standard info from prmon json
[2026-02-15 12:39:47] 2026-02-15 11:38:40,663 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 12:39:47] 2026-02-15 11:38:40,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 12:39:47] 2026-02-15 11:38:40,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 12:39:47] 2026-02-15 11:38:40,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 12:39:47] 2026-02-15 11:38:40,670 | INFO     | fitting pss+swap vs Time
[2026-02-15 12:39:47] 2026-02-15 11:38:40,671 | INFO     | sum of square deviations: 9784425315.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,674 | INFO     | sum of deviations: 58620519289.50002
[2026-02-15 12:39:47] 2026-02-15 11:38:40,675 | INFO     | mean x: 1771145843.5
[2026-02-15 12:39:47] 2026-02-15 11:38:40,675 | INFO     | mean y: 2532402.6170886075
[2026-02-15 12:39:47] 2026-02-15 11:38:40,675 | INFO     | intersect: -10608769308.096571
[2026-02-15 12:39:47] 2026-02-15 11:38:40,675 | INFO     | chi2: 5.474121699517503
[2026-02-15 12:39:47] 2026-02-15 11:38:40,676 | INFO     | sum of square deviations: 9327281860.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,682 | INFO     | sum of deviations: 79199274726.00002
[2026-02-15 12:39:47] 2026-02-15 11:38:40,682 | INFO     | mean x: 1771145691.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,682 | INFO     | mean y: 2539175.463022508
[2026-02-15 12:39:47] 2026-02-15 11:38:40,683 | INFO     | intersect: -15036510385.464489
[2026-02-15 12:39:47] 2026-02-15 11:38:40,683 | INFO     | chi2: 4.728411520425285
[2026-02-15 12:39:47] 2026-02-15 11:38:40,683 | INFO     | current chi2=4.728411520425285 (change=13.622462561582186 %)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,683 | INFO     | right removable region: 310
[2026-02-15 12:39:47] 2026-02-15 11:38:40,684 | INFO     | sum of square deviations: 9327281860.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,687 | INFO     | sum of deviations: -46228344126.999985
[2026-02-15 12:39:47] 2026-02-15 11:38:40,687 | INFO     | mean x: 1771145996.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,687 | INFO     | mean y: 2567333.231511254
[2026-02-15 12:39:47] 2026-02-15 11:38:40,688 | INFO     | intersect: 8780810323.118616
[2026-02-15 12:39:47] 2026-02-15 11:38:40,688 | INFO     | chi2: 1.4560050257389399
[2026-02-15 12:39:47] 2026-02-15 11:38:40,688 | INFO     | current chi2=1.4560050257389399 (change=73.40203404927452 %)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,689 | INFO     | sum of square deviations: 8884603792.5
[2026-02-15 12:39:47] 2026-02-15 11:38:40,692 | INFO     | sum of deviations: -72851660232.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,692 | INFO     | mean x: 1771146148.5
[2026-02-15 12:39:47] 2026-02-15 11:38:40,692 | INFO     | mean y: 2576443.3464052286
[2026-02-15 12:39:47] 2026-02-15 11:38:40,692 | INFO     | intersect: 14525558046.719622
[2026-02-15 12:39:47] 2026-02-15 11:38:40,693 | INFO     | chi2: 1.020152656055262
[2026-02-15 12:39:47] 2026-02-15 11:38:40,693 | INFO     | current chi2=1.020152656055262 (change=29.934812172950952 %)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,693 | INFO     | sum of square deviations: 8456158550.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,696 | INFO     | sum of deviations: -68780514193.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,696 | INFO     | mean x: 1771146301.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,697 | INFO     | mean y: 2574979.7441860465
[2026-02-15 12:39:47] 2026-02-15 11:38:40,697 | INFO     | intersect: 14408685339.844986
[2026-02-15 12:39:47] 2026-02-15 11:38:40,697 | INFO     | chi2: 1.009307450256626
[2026-02-15 12:39:47] 2026-02-15 11:38:40,697 | INFO     | current chi2=1.009307450256626 (change=1.063096364476714 %)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,698 | INFO     | left removable region: 30
[2026-02-15 12:39:47] 2026-02-15 11:38:40,698 | INFO     | sum of square deviations: 6806862510.0
[2026-02-15 12:39:47] 2026-02-15 11:38:40,701 | INFO     | sum of deviations: -20218159762.00001
[2026-02-15 12:39:47] 2026-02-15 11:38:40,701 | INFO     | mean x: 1771146575.5
[2026-02-15 12:39:47] 2026-02-15 11:38:40,701 | INFO     | mean y: 2572189.7214285713
[2026-02-15 12:39:47] 2026-02-15 11:38:40,706 | INFO     | intersect: 5263340182.724157
[2026-02-15 12:39:47] 2026-02-15 11:38:40,706 | INFO     | chi2: 0.1596957439315477
[2026-02-15 12:39:47] 2026-02-15 11:38:40,706 | INFO     | current memory leak: -2.97 B/s (using 280 data points, chi2=0.16)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,707 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-02-15 12:39:47] 2026-02-15 11:38:40,707 | INFO     | ..............................
[2026-02-15 12:39:47] 2026-02-15 11:38:40,707 | INFO     | . Timing measurements:
[2026-02-15 12:39:47] 2026-02-15 11:38:40,707 | INFO     | . get job = 0 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,707 | INFO     | . initial setup = 109 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,708 | INFO     | . payload setup = 118 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,708 | INFO     | . stage-in = 0 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,708 | INFO     | . payload execution = 19395 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,708 | INFO     | . stage-out = 3 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,708 | INFO     | . log creation = 1 s
[2026-02-15 12:39:47] 2026-02-15 11:38:40,708 | INFO     | ..............................
[2026-02-15 12:39:47] 2026-02-15 11:38:41,272 | INFO     | 
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | job summary report
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | --------------------------------------------------
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | PanDA job id: 7009896807
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | task id: 48431113
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | errors: (none)
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | pilot state: finished 
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | transexitcode: 0
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | exeerrorcode: 0
[2026-02-15 12:39:47] 2026-02-15 11:38:41,273 | INFO     | exeerrordiag: 
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | exitcode: 0
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | exitmsg: OK
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | cpuconsumptiontime: 76040 s
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | nevents: 400
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | neventsw: 0
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | pid: 27713
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | pgrp: 27713
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | corecount: 8
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | event service: False
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | sizes: {0: 2281106, 1: 2282164, 2: 2282224, 12: 2282252, 19518: 2315268, 19521: 2324266, 19523: 2324450, 19526: 2324644}
[2026-02-15 12:39:47] 2026-02-15 11:38:41,274 | INFO     | --------------------------------------------------
[2026-02-15 12:39:47] 2026-02-15 11:38:41,275 | INFO     | 
[2026-02-15 12:39:47] 2026-02-15 11:38:41,275 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-15 12:39:47] 2026-02-15 11:38:41,643 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,643 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,643 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,645 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 12:39:47] 2026-02-15 11:38:41,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 12:39:47] 2026-02-15 11:38:41,645 | INFO     | job 7009896807 has completed (purged errors)
[2026-02-15 12:39:47] 2026-02-15 11:38:41,645 | INFO     | overall cleanup function is called
[2026-02-15 12:39:47] 2026-02-15 11:38:42,654 | INFO     | --- collectZombieJob: --- 10, [27713]
[2026-02-15 12:39:47] 2026-02-15 11:38:42,655 | INFO     | zombie collector waiting for pid 27713
[2026-02-15 12:39:47] 2026-02-15 11:38:42,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 12:39:47] 2026-02-15 11:38:42,655 | INFO     | collected zombie processes
[2026-02-15 12:39:47] 2026-02-15 11:38:42,655 | INFO     | will attempt to kill all subprocesses of pid=27713
[2026-02-15 12:39:47] 2026-02-15 11:38:42,769 | INFO     | process IDs to be killed: [27713] (in reverse order)
[2026-02-15 12:39:47] 2026-02-15 11:38:43,688 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 12:39:47] 2026-02-15 11:38:43,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 12:39:47] 2026-02-15 11:38:43,691 | INFO     | did not find any defunct processes belonging to 27713
[2026-02-15 12:39:47] 2026-02-15 11:38:43,694 | INFO     | did not find any defunct processes belonging to 27713
[2026-02-15 12:39:47] 2026-02-15 11:38:43,694 | INFO     | ready for new job
[2026-02-15 12:39:47] 2026-02-15 11:38:43,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 12:39:47] 2026-02-15 11:38:43,696 | INFO     | **************************************
[2026-02-15 12:39:47] 2026-02-15 11:38:43,696 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 12:39:47] 2026-02-15 11:38:43,696 | INFO     | **************************************
[2026-02-15 12:39:47] 2026-02-15 11:38:43,697 | INFO     | 
[2026-02-15 12:39:47] 2026-02-15 11:38:43,697 | INFO     | pilot is running in a VM
[2026-02-15 12:39:47] 2026-02-15 11:38:43,697 | INFO     | architecture information:
[2026-02-15 12:39:47] 2026-02-15 11:38:43,698 | INFO     | executing command: cat /etc/os-release
[2026-02-15 12:39:47] 2026-02-15 11:38:43,957 | INFO     | cat /etc/os-release:
[2026-02-15 12:39:47] NAME="CentOS Linux"
[2026-02-15 12:39:47] VERSION="7 (Core)"
[2026-02-15 12:39:47] ID="centos"
[2026-02-15 12:39:47] ID_LIKE="rhel fedora"
[2026-02-15 12:39:47] VERSION_ID="7"
[2026-02-15 12:39:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 12:39:47] ANSI_COLOR="0;31"
[2026-02-15 12:39:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 12:39:47] HOME_URL="https://www.centos.org/"
[2026-02-15 12:39:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 12:39:47] 
[2026-02-15 12:39:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 12:39:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 12:39:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 12:39:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 12:39:47] 
[2026-02-15 12:39:47] 2026-02-15 11:38:43,957 | INFO     | **************************************
[2026-02-15 12:39:47] 2026-02-15 11:38:44,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-15 12:39:47] 2026-02-15 11:38:44,701 | INFO     | sufficient remaining disk space (494931017728 B)
[2026-02-15 12:39:47] 2026-02-15 11:38:44,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 12:39:47] 2026-02-15 11:38:44,702 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 12:39:47] 2026-02-15 11:38:44,702 | INFO     | update_server=False
[2026-02-15 12:39:47] 2026-02-15 11:38:44,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 12:39:47] 2026-02-15 11:38:44,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 12:39:47] 2026-02-15 11:38:44,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 12:39:47] 2026-02-15 11:38:44,908 | INFO     | all data control threads have been joined
[2026-02-15 12:39:47] 2026-02-15 11:38:44,969 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-15 12:39:47] 2026-02-15 11:38:44,970 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-15 12:39:47] 2026-02-15 11:38:44,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 12:39:47] 2026-02-15 11:38:44,970 | INFO     | will abort loop
[2026-02-15 12:39:47] 2026-02-15 11:38:45,071 | INFO     | all payload control threads have been joined
[2026-02-15 12:39:47] 2026-02-15 11:38:45,224 | INFO     | all job control threads have been joined
[2026-02-15 12:39:47] 2026-02-15 11:38:45,708 | INFO     | [job] retrieve thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:45,739 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:45,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 12:39:47] 2026-02-15 11:38:45,915 | INFO     | [data] control thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:45,975 | INFO     | [job] job monitor thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,077 | INFO     | [payload] control thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,171 | INFO     | [data] copytool_in thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,226 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,230 | INFO     | [job] control thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,442 | INFO     | [job] validate thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,709 | INFO     | [data] copytool_out thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,765 | INFO     | [payload] failed_post thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,847 | INFO     | [job] queue monitor thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:46,919 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:47,072 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:47,091 | INFO     | [payload] validate_post thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:38:48,718 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 12:39:47] 2026-02-15 11:39:13,527 | INFO     | PID=23230 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-15 12:39:47] 2026-02-15 11:39:13,527 | INFO     | .. there are 9 such processes running
[2026-02-15 12:39:47] 2026-02-15 11:39:13,528 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 12:39:47] 2026-02-15 11:39:13,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 12:39:47] 2026-02-15 11:39:13,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 12:39:47] 2026-02-15 11:39:36,023 | INFO     | [monitor] cgroup control has ended
[2026-02-15 12:39:47] 2026-02-15 11:39:37,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978006136640)>', '<ExcThread(monitor, started 139977698547456)>']
[2026-02-15 12:39:47] 2026-02-15 11:39:38,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 12:39:47] 2026-02-15 11:39:38,677 | INFO     | [monitor] control thread has ended
[2026-02-15 12:39:47] 2026-02-15 11:39:42,753 | INFO     | all workflow threads have been joined
[2026-02-15 12:39:47] 2026-02-15 11:39:42,754 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 12:39:47] 2026-02-15 11:39:42,754 | INFO     | traces error code: 0
[2026-02-15 12:39:47] 2026-02-15 11:39:42,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 12:39:47] 2026-02-15 11:39:43,077 [wrapper] ==== pilot stdout END ====
[2026-02-15 12:39:47] 2026-02-15 11:39:43,128 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 12:39:47] 2026-02-15 11:39:43,240 [wrapper] pilotpid: 23230
[2026-02-15 12:39:47] 2026-02-15 11:39:43,349 [wrapper] Pilot exit status: 0
[2026-02-15 12:39:47] 2026-02-15 11:39:43,801 [wrapper] pandaids: 7009896807
[2026-02-15 12:39:47] 2026-02-15 11:39:44,787 [wrapper] cleanup supervisor_pilot  4211 23231
[2026-02-15 12:39:47] 2026-02-15 11:39:44,880 [wrapper] Test setup, not cleaning
[2026-02-15 12:39:47] 2026-02-15 11:39:44,943 [wrapper] apfmon messages muted
[2026-02-15 12:39:47] 2026-02-15 11:39:44,988 [wrapper] ==== wrapper stdout END ====
[2026-02-15 12:39:47] 2026-02-15 11:39:45,034 [wrapper] ==== wrapper stderr END ====
[2026-02-15 12:39:47]  *** Error codes and diagnostics ***
[2026-02-15 12:39:47]     "exeErrorCode": 0,
[2026-02-15 12:39:47]     "exeErrorDiag": "",
[2026-02-15 12:39:47]     "pilotErrorCode": 0,
[2026-02-15 12:39:47]     "pilotErrorDiag": "",
[2026-02-15 12:39:47]  *** Listing of results directory ***
[2026-02-15 12:39:47] total 898996
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc    584627 Feb 14 23:22 pilot3.tar.gz
[2026-02-15 12:39:47] -rwx------. 1 boinc boinc     36322 Feb 14 23:22 runpilot2-wrapper.sh
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc      5111 Feb 14 23:23 queuedata.json
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc       100 Feb 15 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 12:39:47] -rwxr-xr-x. 1 boinc boinc      7986 Feb 15 07:07 run_atlas
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc       105 Feb 15 07:07 job.xml
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc      6391 Feb 15 07:07 init_data.xml
[2026-02-15 12:39:47] -rw-r--r--. 2 boinc boinc 653301524 Feb 15 07:07 EVNT.48431111._000167.pool.root.1
[2026-02-15 12:39:47] -rw-r--r--. 2 boinc boinc     15845 Feb 15 07:07 start_atlas.sh
[2026-02-15 12:39:47] drwxrwx--x. 2 boinc boinc        68 Feb 15 07:07 shared
[2026-02-15 12:39:47] -rw-r--r--. 2 boinc boinc    597965 Feb 15 07:07 input.tar.gz
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc         0 Feb 15 07:07 boinc_lockfile
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc      2544 Feb 15 07:07 pandaJob.out
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc       413 Feb 15 07:12 workernode_map.json
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc   1000934 Feb 15 07:13 agis_schedconf.cvmfs.json
[2026-02-15 12:39:47] drwx------. 5 boinc boinc      4096 Feb 15 07:13 pilot3
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc 256868808 Feb 15 12:37 HITS.48431113._012990.pool.root.1
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc       531 Feb 15 12:37 boinc_task_state.xml
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc      1013 Feb 15 12:38 memory_monitor_summary.json
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc   1513015 Feb 15 12:38 agis_ddmendpoints.agis.ALL.json
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc    531759 Feb 15 12:38 log.48431113._012990.job.log.tgz.1
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc      6316 Feb 15 12:38 heartbeat.json
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc        95 Feb 15 12:39 pilot_heartbeat.json
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc      5066 Feb 15 12:39 pilotlog.txt
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc   2711961 Feb 15 12:39 log.48431113._012990.job.log.1
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc       357 Feb 15 12:39 output.list
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc       620 Feb 15 12:39 runtime_log
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc   3256320 Feb 15 12:39 result.tar.gz
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc      8816 Feb 15 12:39 runtime_log.err
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc       656 Feb 15 12:39 nwsKDmSDdB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0rnKDmYo8dUm.diag
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc      8192 Feb 15 12:39 boinc_mmap_file
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc        28 Feb 15 12:39 wrapper_checkpoint.txt
[2026-02-15 12:39:47] -rw-r--r--. 1 boinc boinc     20722 Feb 15 12:39 stderr.txt
[2026-02-15 12:39:47] HITS file was successfully produced:
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc 256868808 Feb 15 12:37 shared/HITS.pool.root.1
[2026-02-15 12:39:47]  *** Contents of shared directory: ***
[2026-02-15 12:39:47] total 892624
[2026-02-15 12:39:47] -rw-r--r--. 2 boinc boinc 653301524 Feb 15 07:07 ATLAS.root_0
[2026-02-15 12:39:47] -rw-r--r--. 2 boinc boinc     15845 Feb 15 07:07 start_atlas.sh
[2026-02-15 12:39:47] -rw-r--r--. 2 boinc boinc    597965 Feb 15 07:07 input.tar.gz
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc 256868808 Feb 15 12:37 HITS.pool.root.1
[2026-02-15 12:39:47] -rw-------. 1 boinc boinc   3256320 Feb 15 12:39 result.tar.gz
12:39:49 (19218): run_atlas exited; CPU time 76322.166416
12:39:49 (19218): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN