Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
14:39:37 (720164): wrapper (7.7.26015): starting
14:39:37 (720164): wrapper: running run_atlas (--nthreads 4)
[2026-02-16 14:39:37] Arguments: --nthreads 4
[2026-02-16 14:39:37] Threads: 4
[2026-02-16 14:39:37] Checking for CVMFS
[2026-02-16 14:39:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 14:39:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 14:39:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 14:39:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 14:39:37] 2.13.3.0 11582 835 49004 156284 3 50 26658735 33554433 0 130560 0 470262 99.990 23073 208 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-16 14:39:37] CVMFS is ok
[2026-02-16 14:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 14:39:37] Checking for apptainer binary...
[2026-02-16 14:39:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-16 14:39:37] Running /usr/bin/apptainer --version
[2026-02-16 14:39:37] apptainer version 1.4.5
[2026-02-16 14:39:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 14:39:38] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-16 14:39:38] apptainer works
[2026-02-16 14:39:38] Set ATHENA_PROC_NUMBER=4
[2026-02-16 14:39:38] Set ATHENA_CORE_NUMBER=4
[2026-02-16 14:39:38] Starting ATLAS job with PandaID=7009995597
[2026-02-16 14:39:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 15:37:57]  *** The last 200 lines of the pilot log: ***
[2026-02-16 15:37:57]  guid=c11e5e1f-e7c5-4190-aaa8-b856ac3ed479
[2026-02-16 15:37:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-16 15:37:57]  is_altstaged=None
[2026-02-16 15:37:57]  is_tar=False
[2026-02-16 15:37:57]  lfn=log.48466714._002492.job.log.tgz.1
[2026-02-16 15:37:57]  mtime=0
[2026-02-16 15:37:57]  protocol_id=None
[2026-02-16 15:37:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-16 15:37:57]  replicas=None
[2026-02-16 15:37:57]  scope=mc23_13p6TeV
[2026-02-16 15:37:57]  status=None
[2026-02-16 15:37:57]  status_code=0
[2026-02-16 15:37:57]  storage_token=
[2026-02-16 15:37:57]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7009995597/log.48466714._002492.job.log.tgz.1
[2026-02-16 15:37:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/f6/log.48466714._002492.job.log.tgz.1
[2026-02-16 15:37:57]  workdir=None
[2026-02-16 15:37:57] ]
[2026-02-16 15:37:57] 2026-02-16 13:37:11,171 | INFO     | transferring file log.48466714._002492.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7009995597/log.48466714._002492.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-16 15:37:57] 2026-02-16 13:37:11,171 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7009995597/log.48466714._002492.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48466714._002492.job
[2026-02-16 15:37:57] 2026-02-16 13:37:11,179 | INFO     | adding to output.list: log.48466714._002492.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/f6/log.48466714._002492.job.log.tg
[2026-02-16 15:37:57] 2026-02-16 13:37:11,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-16 15:37:57] 2026-02-16 13:37:11,179 | INFO     | summary of transferred files:
[2026-02-16 15:37:57] 2026-02-16 13:37:11,179 | INFO     |  -- lfn=log.48466714._002492.job.log.tgz.1, status_code=0, status=transferred
[2026-02-16 15:37:57] 2026-02-16 13:37:11,179 | INFO     | stage-out finished correctly
[2026-02-16 15:37:57] 2026-02-16 13:37:11,217 | INFO     | time since job start (3445s) is within the limit (349056.0s)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,554 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-16 15:37:57] 2026-02-16 13:37:12,580 | INFO     | job 7009995597 has state=finished
[2026-02-16 15:37:57] 2026-02-16 13:37:12,580 | INFO     | preparing for final server update for job 7009995597 in state='finished'
[2026-02-16 15:37:57] 2026-02-16 13:37:12,580 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7009995597/jobReport.json
[2026-02-16 15:37:57] 2026-02-16 13:37:12,581 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-16 15:37:57] 2026-02-16 13:37:12,581 | INFO     | this job has now completed (state=finished)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,581 | INFO     | log transfer has been attempted: DONE
[2026-02-16 15:37:57] 2026-02-16 13:37:12,581 | INFO     | job 7009995597 has finished - writing final server update
[2026-02-16 15:37:57] 2026-02-16 13:37:12,581 | INFO     | total number of processed events: 400 (read)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,583 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7009995597/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,583 | INFO     | extracted standard info from prmon json
[2026-02-16 15:37:57] 2026-02-16 13:37:12,583 | INFO     | extracted standard memory fields from prmon json
[2026-02-16 15:37:57] 2026-02-16 13:37:12,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-16 15:37:57] 2026-02-16 13:37:12,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-16 15:37:57] 2026-02-16 13:37:12,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | fitting pss+swap vs Time
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | sum of square deviations: 38744912.5
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | sum of deviations: -7659916705.0
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | mean x: 1771247400.5
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | mean y: 2627974.44
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | intersect: 350180410716.3103
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | chi2: 0.0952971675407058
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | current memory leak: -197.70 B/s (using 50 data points, chi2=0.10)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | could have reported an average CPU frequency of 3757 MHz (5 samples)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | ..............................
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . Timing measurements:
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . get job = 0 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . initial setup = 3 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . payload setup = 2 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . stage-in = 0 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . payload execution = 3428 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . stage-out = 0 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | . log creation = 0 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,584 | INFO     | ..............................
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | 
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | job summary report
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | --------------------------------------------------
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | PanDA job id: 7009995597
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | task id: 48466714
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | errors: (none)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | pilot state: finished 
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | transexitcode: 0
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | exeerrorcode: 0
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | exeerrordiag: 
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | exitcode: 0
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | exitmsg: OK
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | cpuconsumptiontime: 12926 s
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | nevents: 400
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | neventsw: 0
[2026-02-16 15:37:57] 2026-02-16 13:37:12,609 | INFO     | pid: 728820
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | pgrp: 728820
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | corecount: 4
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | event service: False
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | sizes: {0: 2282132, 11: 2282132, 3434: 2316855, 3435: 2317081}
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | --------------------------------------------------
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | 
[2026-02-16 15:37:57] 2026-02-16 13:37:12,610 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | job 7009995597 has completed (purged errors)
[2026-02-16 15:37:57] 2026-02-16 13:37:12,618 | INFO     | overall cleanup function is called
[2026-02-16 15:37:57] 2026-02-16 13:37:13,625 | INFO     | --- collectZombieJob: --- 10, [728820]
[2026-02-16 15:37:57] 2026-02-16 13:37:13,625 | INFO     | zombie collector waiting for pid 728820
[2026-02-16 15:37:57] 2026-02-16 13:37:13,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-16 15:37:57] 2026-02-16 13:37:13,625 | INFO     | collected zombie processes
[2026-02-16 15:37:57] 2026-02-16 13:37:13,625 | INFO     | will attempt to kill all subprocesses of pid=728820
[2026-02-16 15:37:57] 2026-02-16 13:37:13,710 | INFO     | process IDs to be killed: [728820] (in reverse order)
[2026-02-16 15:37:57] 2026-02-16 13:37:13,739 | WARNING  | found no corresponding commands to process id(s)
[2026-02-16 15:37:57] 2026-02-16 13:37:13,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-16 15:37:57] 2026-02-16 13:37:13,741 | INFO     | did not find any defunct processes belonging to 728820
[2026-02-16 15:37:57] 2026-02-16 13:37:13,743 | INFO     | did not find any defunct processes belonging to 728820
[2026-02-16 15:37:57] 2026-02-16 13:37:13,743 | INFO     | ready for new job
[2026-02-16 15:37:57] 2026-02-16 13:37:13,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-16 15:37:57] 2026-02-16 13:37:13,744 | INFO     | **************************************
[2026-02-16 15:37:57] 2026-02-16 13:37:13,744 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-16 15:37:57] 2026-02-16 13:37:13,744 | INFO     | **************************************
[2026-02-16 15:37:57] 2026-02-16 13:37:13,744 | INFO     | 
[2026-02-16 15:37:57] 2026-02-16 13:37:13,745 | INFO     | architecture information:
[2026-02-16 15:37:57] 2026-02-16 13:37:13,745 | INFO     | executing command: cat /etc/os-release
[2026-02-16 15:37:57] 2026-02-16 13:37:13,750 | INFO     | cat /etc/os-release:
[2026-02-16 15:37:57] NAME="CentOS Linux"
[2026-02-16 15:37:57] VERSION="7 (Core)"
[2026-02-16 15:37:57] ID="centos"
[2026-02-16 15:37:57] ID_LIKE="rhel fedora"
[2026-02-16 15:37:57] VERSION_ID="7"
[2026-02-16 15:37:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-16 15:37:57] ANSI_COLOR="0;31"
[2026-02-16 15:37:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-16 15:37:57] HOME_URL="https://www.centos.org/"
[2026-02-16 15:37:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-16 15:37:57] 
[2026-02-16 15:37:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-16 15:37:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-16 15:37:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-16 15:37:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-16 15:37:57] 
[2026-02-16 15:37:57] 2026-02-16 13:37:13,750 | INFO     | **************************************
[2026-02-16 15:37:57] 2026-02-16 13:37:14,253 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | INFO     | sufficient remaining disk space (59027488768 B)
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | INFO     | current server update state: UPDATING_FINAL
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | INFO     | update_server=False
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-16 15:37:57] 2026-02-16 13:37:14,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-16 15:37:57] 2026-02-16 13:37:14,386 | INFO     | all data control threads have been joined
[2026-02-16 15:37:57] 2026-02-16 13:37:14,628 | WARNING  | process 728820 can no longer be monitored (due to stat problems) - aborting
[2026-02-16 15:37:57] 2026-02-16 13:37:14,683 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 15:37:57] 2026-02-16 13:37:14,762 | INFO     | number of running child processes to parent process 728820: 1
[2026-02-16 15:37:57] 2026-02-16 13:37:14,762 | INFO     | maximum number of monitored processes: 6
[2026-02-16 15:37:57] 2026-02-16 13:37:14,762 | INFO     | aborting job monitoring since job object (job id=7009995597) has expired
[2026-02-16 15:37:57] 2026-02-16 13:37:14,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-16 15:37:57] 2026-02-16 13:37:14,762 | INFO     | will abort loop
[2026-02-16 15:37:57] 2026-02-16 13:37:15,263 | INFO     | [job] retrieve thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:15,264 | INFO     | [job] queue monitor thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:15,278 | INFO     | all payload control threads have been joined
[2026-02-16 15:37:57] 2026-02-16 13:37:15,310 | INFO     | all job control threads have been joined
[2026-02-16 15:37:57] 2026-02-16 13:37:15,386 | INFO     | [data] control thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:15,767 | INFO     | [job] job monitor thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:15,775 | INFO     | [payload] failed_post thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,263 | INFO     | [data] copytool_out thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,282 | INFO     | [payload] control thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,313 | INFO     | [job] control thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,402 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,510 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,616 | INFO     | [job] validate thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,688 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,715 | INFO     | [data] copytool_in thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:16,753 | INFO     | [payload] validate_post thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:18,264 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:24,407 | INFO     | job.realtimelogging is not enabled
[2026-02-16 15:37:57] 2026-02-16 13:37:25,412 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 15:37:57] 2026-02-16 13:37:44,369 | INFO     | PID=723995 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-16 15:37:57] 2026-02-16 13:37:44,369 | INFO     | found 0 job(s) in 20 queues
[2026-02-16 15:37:57] 2026-02-16 13:37:44,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-16 15:37:57] 2026-02-16 13:37:44,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-16 15:37:57] 2026-02-16 13:37:50,001 | INFO     | [monitor] cgroup control has ended
[2026-02-16 15:37:57] 2026-02-16 13:37:51,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133897414464)>', '<ExcThread(monitor, started 140133533722368)>']
[2026-02-16 15:37:57] 2026-02-16 13:37:52,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 15:37:57] 2026-02-16 13:37:52,406 | INFO     | [monitor] control thread has ended
[2026-02-16 15:37:57] 2026-02-16 13:37:56,934 | INFO     | all workflow threads have been joined
[2026-02-16 15:37:57] 2026-02-16 13:37:56,934 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 15:37:57] 2026-02-16 13:37:56,934 | INFO     | traces error code: 0
[2026-02-16 15:37:57] 2026-02-16 13:37:56,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 15:37:57] 2026-02-16 13:37:56,978 [wrapper] ==== pilot stdout END ====
[2026-02-16 15:37:57] 2026-02-16 13:37:56,979 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 15:37:57] 2026-02-16 13:37:56,981 [wrapper] pilotpid: 723995
[2026-02-16 15:37:57] 2026-02-16 13:37:56,982 [wrapper] Pilot exit status: 0
[2026-02-16 15:37:57] 2026-02-16 13:37:56,987 [wrapper] pandaids: 7009995597
[2026-02-16 15:37:57] 2026-02-16 13:37:57,007 [wrapper] cleanup supervisor_pilot  763505 723996
[2026-02-16 15:37:57] 2026-02-16 13:37:57,008 [wrapper] Test setup, not cleaning
[2026-02-16 15:37:57] 2026-02-16 13:37:57,010 [wrapper] apfmon messages muted
[2026-02-16 15:37:57] 2026-02-16 13:37:57,011 [wrapper] ==== wrapper stdout END ====
[2026-02-16 15:37:57] 2026-02-16 13:37:57,013 [wrapper] ==== wrapper stderr END ====
[2026-02-16 15:37:57]  *** Error codes and diagnostics ***
[2026-02-16 15:37:57]     "exeErrorCode": 0,
[2026-02-16 15:37:57]     "exeErrorDiag": "",
[2026-02-16 15:37:57]     "pilotErrorCode": 0,
[2026-02-16 15:37:57]     "pilotErrorDiag": "",
[2026-02-16 15:37:57]  *** Listing of results directory ***
[2026-02-16 15:37:57] total 722188
[2026-02-16 15:37:57] -rw-r--r-- 1 ek ek    584627 Feb 15 00:22 pilot3.tar.gz
[2026-02-16 15:37:57] -rwx------ 1 ek ek     36322 Feb 15 00:25 runpilot2-wrapper.sh
[2026-02-16 15:37:57] -rw-r--r-- 1 ek ek      5111 Feb 15 00:29 queuedata.json
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek       100 Feb 16 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 15:37:57] -rwxr-xr-x 1 ek ek      7986 Feb 16 14:39 run_atlas
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek       105 Feb 16 14:39 job.xml
[2026-02-16 15:37:57] -rw-r--r-- 2 ek ek 535436120 Feb 16 14:39 EVNT.48466711._000069.pool.root.1
[2026-02-16 15:37:57] -rw-r--r-- 2 ek ek    597943 Feb 16 14:39 input.tar.gz
[2026-02-16 15:37:57] -rw-r--r-- 2 ek ek     15845 Feb 16 14:39 start_atlas.sh
[2026-02-16 15:37:57] drwxrwx--x 2 ek ek      4096 Feb 16 14:39 shared
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek         0 Feb 16 14:39 boinc_setup_complete
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek      9840 Feb 16 14:39 init_data.xml
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek         0 Feb 16 14:39 boinc_lockfile
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek      2497 Feb 16 14:39 pandaJob.out
[2026-02-16 15:37:57] -rw------- 1 ek ek        50 Feb 16 14:39 setup.sh.local
[2026-02-16 15:37:57] -rw------- 1 ek ek   1000940 Feb 16 14:39 agis_schedconf.cvmfs.json
[2026-02-16 15:37:57] -rw------- 1 ek ek   1513015 Feb 16 14:39 agis_ddmendpoints.agis.ALL.json
[2026-02-16 15:37:57] -rw------- 1 ek ek       433 Feb 16 14:39 workernode_map.json
[2026-02-16 15:37:57] drwx------ 5 ek ek      4096 Feb 16 14:39 pilot3
[2026-02-16 15:37:57] -rw------- 1 ek ek 198624127 Feb 16 15:36 HITS.48466714._002492.pool.root.1
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek       530 Feb 16 15:36 boinc_task_state.xml
[2026-02-16 15:37:57] -rw------- 1 ek ek      1028 Feb 16 15:37 memory_monitor_summary.json
[2026-02-16 15:37:57] -rw------- 1 ek ek        95 Feb 16 15:37 pilot_heartbeat.json
[2026-02-16 15:37:57] -rw------- 1 ek ek    239074 Feb 16 15:37 log.48466714._002492.job.log.tgz.1
[2026-02-16 15:37:57] -rw------- 1 ek ek      6322 Feb 16 15:37 heartbeat.json
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek        27 Feb 16 15:37 wrapper_checkpoint.txt
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek      8192 Feb 16 15:37 boinc_mmap_file
[2026-02-16 15:37:57] -rw------- 1 ek ek      5334 Feb 16 15:37 pilotlog.txt
[2026-02-16 15:37:57] -rw------- 1 ek ek    519188 Feb 16 15:37 log.48466714._002492.job.log.1
[2026-02-16 15:37:57] -rw------- 1 ek ek       357 Feb 16 15:37 output.list
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek       620 Feb 16 15:37 runtime_log
[2026-02-16 15:37:57] -rw------- 1 ek ek    778240 Feb 16 15:37 result.tar.gz
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek      9501 Feb 16 15:37 runtime_log.err
[2026-02-16 15:37:57] -rw------- 1 ek ek       660 Feb 16 15:37 m9ONDmWGdB9n9Rq4apOajLDm4fhM0noT9bVooX4SDm41mKDmNbQqBn.diag
[2026-02-16 15:37:57] -rw-rw-r-- 1 ek ek     21158 Feb 16 15:37 stderr.txt
[2026-02-16 15:37:57] HITS file was successfully produced:
[2026-02-16 15:37:57] -rw------- 1 ek ek 198624127 Feb 16 15:36 shared/HITS.pool.root.1
[2026-02-16 15:37:57]  *** Contents of shared directory: ***
[2026-02-16 15:37:57] total 718228
[2026-02-16 15:37:57] -rw-r--r-- 2 ek ek 535436120 Feb 16 14:39 ATLAS.root_0
[2026-02-16 15:37:57] -rw-r--r-- 2 ek ek    597943 Feb 16 14:39 input.tar.gz
[2026-02-16 15:37:57] -rw-r--r-- 2 ek ek     15845 Feb 16 14:39 start_atlas.sh
[2026-02-16 15:37:57] -rw------- 1 ek ek 198624127 Feb 16 15:36 HITS.pool.root.1
[2026-02-16 15:37:57] -rw------- 1 ek ek    778240 Feb 16 15:37 result.tar.gz
15:37:58 (720164): run_atlas exited; CPU time 12955.632876
15:37:58 (720164): called boinc_finish(0)

</stderr_txt>
]]>

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