Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:41:17 (16873): wrapper (7.7.26015): starting
19:41:17 (16873): wrapper: running run_atlas (--nthreads 12)
[2026-02-14 19:41:17] Arguments: --nthreads 12
[2026-02-14 19:41:17] Threads: 12
[2026-02-14 19:41:17] Checking for CVMFS
[2026-02-14 19:41:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-14 19:41:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-14 19:41:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-14 19:41:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-14 19:41:18] 2.11.2.0 2984 403568 96804 156250 2 50 14811710 20275200 1 130560 1 173505845 99.959 23129252 17195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-14 19:41:18] CVMFS is ok
[2026-02-14 19:41:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-14 19:41:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-14 19:41:18] Further information can be found at the LHC@home message board.
[2026-02-14 19:41:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-14 19:41:18] Checking for apptainer binary...
[2026-02-14 19:41:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-14 19:41:18] Running /usr/bin/apptainer --version
[2026-02-14 19:41:18] apptainer version 1.3.2-1.el7
[2026-02-14 19:41:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-14 19:41:19] c-205-26.aglt2.org
[2026-02-14 19:41:19] apptainer works
[2026-02-14 19:41:19] Set ATHENA_PROC_NUMBER=12
[2026-02-14 19:41:19] Set ATHENA_CORE_NUMBER=12
[2026-02-14 19:41:19] Starting ATLAS job with PandaID=7009870417
[2026-02-14 19:41:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-14 20:54:53]  *** The last 200 lines of the pilot log: ***
[2026-02-14 20:54:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7009870417/log.48466714._001963.job.log.tgz.1
[2026-02-14 20:54:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/d2/log.48466714._001963.job.log.tgz.1
[2026-02-14 20:54:53]  workdir=None
[2026-02-14 20:54:53] ]
[2026-02-14 20:54:53] 2026-02-15 01:54:09,916 | INFO     | transferring file log.48466714._001963.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/log.48466714._001963.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-14 20:54:53] 2026-02-15 01:54:09,916 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/log.48466714._001963.job.log.tgz.1 /tmp/boinchome/slots/0/log.48466714._001963.job
[2026-02-14 20:54:53] 2026-02-15 01:54:09,939 | INFO     | adding to output.list: log.48466714._001963.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/d2/log.48466714._001963.job.log.tg
[2026-02-14 20:54:53] 2026-02-15 01:54:09,940 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-14 20:54:53] 2026-02-15 01:54:09,940 | INFO     | summary of transferred files:
[2026-02-14 20:54:53] 2026-02-15 01:54:09,941 | INFO     |  -- lfn=log.48466714._001963.job.log.tgz.1, status_code=0, status=transferred
[2026-02-14 20:54:53] 2026-02-15 01:54:09,941 | INFO     | stage-out finished correctly
[2026-02-14 20:54:53] 2026-02-15 01:54:10,123 | INFO     | PID=20859 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-14 20:54:53] 2026-02-15 01:54:10,522 | WARNING  | process 25261 can no longer be monitored (due to stat problems) - aborting
[2026-02-14 20:54:53] 2026-02-15 01:54:10,522 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/memory_monitor_summary.json (trf name=prmon)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,522 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/memory_monitor_summary.json (trf name=prmon)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,523 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-14 20:54:53] 2026-02-15 01:54:10,523 | WARNING  | maxPSS not found in memory monitor output
[2026-02-14 20:54:53] 2026-02-15 01:54:10,523 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4798556 B
[2026-02-14 20:54:53] 2026-02-15 01:54:10,524 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16080 B
[2026-02-14 20:54:53] 2026-02-15 01:54:10,524 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-14 20:54:53] 2026-02-15 01:54:10,540 | INFO     | sufficient remaining disk space (28690087936 B)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,540 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,542 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7009870417: 5096549 B (within 5033164800 B limit)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,542 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7009870417/HITS.48466714._001963.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,542 | INFO     | total size of present files: 0 B (workdir size: 5096549 B)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,542 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/HITS.48466714._001963.pool.root.1 since it does not exist
[2026-02-14 20:54:53] 2026-02-15 01:54:10,631 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-14 20:54:53] 2026-02-15 01:54:10,723 | INFO     | number of running child processes to parent process 25261: 1
[2026-02-14 20:54:53] 2026-02-15 01:54:10,723 | INFO     | maximum number of monitored processes: 6
[2026-02-14 20:54:53] 2026-02-15 01:54:10,915 | INFO     | job 7009870417 has state=finished
[2026-02-14 20:54:53] 2026-02-15 01:54:10,915 | INFO     | preparing for final server update for job 7009870417 in state='finished'
[2026-02-14 20:54:53] 2026-02-15 01:54:10,915 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/jobReport.json
[2026-02-14 20:54:53] 2026-02-15 01:54:10,918 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-14 20:54:53] 2026-02-15 01:54:10,919 | INFO     | this job has now completed (state=finished)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,919 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,919 | INFO     | log transfer has been attempted: DONE
[2026-02-14 20:54:53] 2026-02-15 01:54:10,919 | INFO     | job 7009870417 has finished - writing final server update
[2026-02-14 20:54:53] 2026-02-15 01:54:10,920 | INFO     | total number of processed events: 400 (read)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,923 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009870417/memory_monitor_summary.json (trf name=prmon)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,923 | INFO     | extracted standard info from prmon json
[2026-02-14 20:54:53] 2026-02-15 01:54:10,924 | INFO     | extracted standard memory fields from prmon json
[2026-02-14 20:54:53] 2026-02-15 01:54:10,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-14 20:54:53] 2026-02-15 01:54:10,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-14 20:54:53] 2026-02-15 01:54:10,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-14 20:54:53] 2026-02-15 01:54:10,926 | INFO     | fitting pss+swap vs Time
[2026-02-14 20:54:53] 2026-02-15 01:54:10,926 | INFO     | sum of square deviations: 81266640.0
[2026-02-14 20:54:53] 2026-02-15 01:54:10,926 | INFO     | sum of deviations: -6986036224.0
[2026-02-14 20:54:53] 2026-02-15 01:54:10,926 | INFO     | mean x: 1771118350.5
[2026-02-14 20:54:53] 2026-02-15 01:54:10,926 | INFO     | mean y: 2799533.125
[2026-02-14 20:54:53] 2026-02-15 01:54:10,927 | INFO     | intersect: 152255888298.50433
[2026-02-14 20:54:53] 2026-02-15 01:54:10,927 | INFO     | chi2: 0.08478953573407925
[2026-02-14 20:54:53] 2026-02-15 01:54:10,927 | INFO     | current memory leak: -85.96 B/s (using 64 data points, chi2=0.08)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,927 | INFO     | could have reported an average CPU frequency of 1762 MHz (6 samples)
[2026-02-14 20:54:53] 2026-02-15 01:54:10,927 | INFO     | ..............................
[2026-02-14 20:54:53] 2026-02-15 01:54:10,927 | INFO     | . Timing measurements:
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . get job = 0 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . initial setup = 7 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . payload setup = 7 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . stage-in = 0 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . payload execution = 4326 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . stage-out = 0 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | . log creation = 0 s
[2026-02-14 20:54:53] 2026-02-15 01:54:10,928 | INFO     | ..............................
[2026-02-14 20:54:53] 2026-02-15 01:54:11,009 | INFO     | 
[2026-02-14 20:54:53] 2026-02-15 01:54:11,009 | INFO     | job summary report
[2026-02-14 20:54:53] 2026-02-15 01:54:11,010 | INFO     | --------------------------------------------------
[2026-02-14 20:54:53] 2026-02-15 01:54:11,010 | INFO     | PanDA job id: 7009870417
[2026-02-14 20:54:53] 2026-02-15 01:54:11,010 | INFO     | task id: 48466714
[2026-02-14 20:54:53] 2026-02-15 01:54:11,010 | INFO     | errors: (none)
[2026-02-14 20:54:53] 2026-02-15 01:54:11,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-14 20:54:53] 2026-02-15 01:54:11,010 | INFO     | pilot state: finished 
[2026-02-14 20:54:53] 2026-02-15 01:54:11,011 | INFO     | transexitcode: 0
[2026-02-14 20:54:53] 2026-02-15 01:54:11,011 | INFO     | exeerrorcode: 0
[2026-02-14 20:54:53] 2026-02-15 01:54:11,011 | INFO     | exeerrordiag: 
[2026-02-14 20:54:53] 2026-02-15 01:54:11,011 | INFO     | exitcode: 0
[2026-02-14 20:54:53] 2026-02-15 01:54:11,011 | INFO     | exitmsg: OK
[2026-02-14 20:54:53] 2026-02-15 01:54:11,011 | INFO     | cpuconsumptiontime: 47274 s
[2026-02-14 20:54:53] 2026-02-15 01:54:11,012 | INFO     | nevents: 400
[2026-02-14 20:54:53] 2026-02-15 01:54:11,012 | INFO     | neventsw: 0
[2026-02-14 20:54:53] 2026-02-15 01:54:11,012 | INFO     | pid: 25261
[2026-02-14 20:54:53] 2026-02-15 01:54:11,012 | INFO     | pgrp: 25261
[2026-02-14 20:54:53] 2026-02-15 01:54:11,012 | INFO     | corecount: 12
[2026-02-14 20:54:53] 2026-02-15 01:54:11,012 | INFO     | event service: False
[2026-02-14 20:54:53] 2026-02-15 01:54:11,013 | INFO     | sizes: {0: 2282134, 11: 2282134, 4337: 2308147, 4338: 2317145, 4339: 2317423}
[2026-02-14 20:54:53] 2026-02-15 01:54:11,013 | INFO     | --------------------------------------------------
[2026-02-14 20:54:53] 2026-02-15 01:54:11,013 | INFO     | 
[2026-02-14 20:54:53] 2026-02-15 01:54:11,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-14 20:54:53] 2026-02-15 01:54:11,038 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,038 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,038 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,039 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,041 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-14 20:54:53] 2026-02-15 01:54:11,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,041 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-14 20:54:53] 2026-02-15 01:54:11,042 | INFO     | job 7009870417 has completed (purged errors)
[2026-02-14 20:54:53] 2026-02-15 01:54:11,042 | INFO     | overall cleanup function is called
[2026-02-14 20:54:53] 2026-02-15 01:54:12,050 | INFO     | --- collectZombieJob: --- 10, [25261]
[2026-02-14 20:54:53] 2026-02-15 01:54:12,051 | INFO     | zombie collector waiting for pid 25261
[2026-02-14 20:54:53] 2026-02-15 01:54:12,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-14 20:54:53] 2026-02-15 01:54:12,051 | INFO     | collected zombie processes
[2026-02-14 20:54:53] 2026-02-15 01:54:12,051 | INFO     | will attempt to kill all subprocesses of pid=25261
[2026-02-14 20:54:53] 2026-02-15 01:54:12,143 | INFO     | process IDs to be killed: [25261] (in reverse order)
[2026-02-14 20:54:53] 2026-02-15 01:54:12,199 | WARNING  | found no corresponding commands to process id(s)
[2026-02-14 20:54:53] 2026-02-15 01:54:12,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-14 20:54:53] 2026-02-15 01:54:12,203 | INFO     | did not find any defunct processes belonging to 25261
[2026-02-14 20:54:53] 2026-02-15 01:54:12,206 | INFO     | did not find any defunct processes belonging to 25261
[2026-02-14 20:54:53] 2026-02-15 01:54:12,206 | INFO     | ready for new job
[2026-02-14 20:54:53] 2026-02-15 01:54:12,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-14 20:54:53] 2026-02-15 01:54:12,207 | INFO     | **************************************
[2026-02-14 20:54:53] 2026-02-15 01:54:12,207 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-14 20:54:53] 2026-02-15 01:54:12,208 | INFO     | **************************************
[2026-02-14 20:54:53] 2026-02-15 01:54:12,208 | INFO     | 
[2026-02-14 20:54:53] 2026-02-15 01:54:12,208 | INFO     | architecture information:
[2026-02-14 20:54:53] 2026-02-15 01:54:12,209 | INFO     | executing command: cat /etc/os-release
[2026-02-14 20:54:53] 2026-02-15 01:54:12,224 | INFO     | cat /etc/os-release:
[2026-02-14 20:54:53] NAME="CentOS Linux"
[2026-02-14 20:54:53] VERSION="7 (Core)"
[2026-02-14 20:54:53] ID="centos"
[2026-02-14 20:54:53] ID_LIKE="rhel fedora"
[2026-02-14 20:54:53] VERSION_ID="7"
[2026-02-14 20:54:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-14 20:54:53] ANSI_COLOR="0;31"
[2026-02-14 20:54:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-14 20:54:53] HOME_URL="https://www.centos.org/"
[2026-02-14 20:54:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-14 20:54:53] 
[2026-02-14 20:54:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-14 20:54:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-14 20:54:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-14 20:54:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-14 20:54:53] 
[2026-02-14 20:54:53] 2026-02-15 01:54:12,224 | INFO     | **************************************
[2026-02-14 20:54:53] 2026-02-15 01:54:12,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-14 20:54:53] 2026-02-15 01:54:12,743 | INFO     | sufficient remaining disk space (28696379392 B)
[2026-02-14 20:54:53] 2026-02-15 01:54:12,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-14 20:54:53] 2026-02-15 01:54:12,744 | INFO     | current server update state: UPDATING_FINAL
[2026-02-14 20:54:53] 2026-02-15 01:54:12,744 | INFO     | update_server=False
[2026-02-14 20:54:53] 2026-02-15 01:54:12,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-14 20:54:53] 2026-02-15 01:54:12,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-14 20:54:53] 2026-02-15 01:54:12,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-14 20:54:53] 2026-02-15 01:54:13,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-14 20:54:53] 2026-02-15 01:54:13,226 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-14 20:54:53] 2026-02-15 01:54:13,227 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-14 20:54:53] 2026-02-15 01:54:13,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-14 20:54:53] 2026-02-15 01:54:13,227 | INFO     | will abort loop
[2026-02-14 20:54:53] 2026-02-15 01:54:13,600 | INFO     | all data control threads have been joined
[2026-02-14 20:54:53] 2026-02-15 01:54:13,750 | INFO     | [job] retrieve thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:13,750 | INFO     | [job] queue monitor thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:13,931 | INFO     | all job control threads have been joined
[2026-02-14 20:54:53] 2026-02-15 01:54:13,996 | INFO     | all payload control threads have been joined
[2026-02-14 20:54:53] 2026-02-15 01:54:14,106 | INFO     | [data] copytool_in thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,232 | INFO     | [job] job monitor thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,398 | INFO     | [payload] failed_post thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,503 | INFO     | [payload] execute_payloads thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,606 | INFO     | [data] control thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,937 | INFO     | [job] control thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,962 | INFO     | [job] create_data_payload thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,967 | INFO     | [payload] validate_pre thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,969 | INFO     | [payload] validate_post thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,970 | INFO     | [job] validate thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:14,997 | INFO     | [payload] control thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:15,035 | INFO     | [data] copytool_out thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:16,751 | INFO     | [data] queue_monitor thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:23,050 | INFO     | job.realtimelogging is not enabled
[2026-02-14 20:54:53] 2026-02-15 01:54:24,056 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-14 20:54:53] 2026-02-15 01:54:42,322 | INFO     | PID=20859 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-14 20:54:53] 2026-02-15 01:54:42,323 | INFO     | found 0 job(s) in 20 queues
[2026-02-14 20:54:53] 2026-02-15 01:54:42,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-14 20:54:53] 2026-02-15 01:54:42,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-14 20:54:53] 2026-02-15 01:54:46,724 | INFO     | [monitor] cgroup control has ended
[2026-02-14 20:54:53] 2026-02-15 01:54:47,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293667419968)>', '<ExcThread(monitor, started 140292917274368)>']
[2026-02-14 20:54:53] 2026-02-15 01:54:48,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-14 20:54:53] 2026-02-15 01:54:48,354 | INFO     | [monitor] control thread has ended
[2026-02-14 20:54:53] 2026-02-15 01:54:52,755 | INFO     | all workflow threads have been joined
[2026-02-14 20:54:53] 2026-02-15 01:54:52,755 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-14 20:54:53] 2026-02-15 01:54:52,755 | INFO     | traces error code: 0
[2026-02-14 20:54:53] 2026-02-15 01:54:52,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-14 20:54:53] 2026-02-15 01:54:52,846 [wrapper] ==== pilot stdout END ====
[2026-02-14 20:54:53] 2026-02-15 01:54:52,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-14 20:54:53] 2026-02-15 01:54:52,854 [wrapper] pilotpid: 20859
[2026-02-14 20:54:53] 2026-02-15 01:54:52,858 [wrapper] Pilot exit status: 0
[2026-02-14 20:54:53] 2026-02-15 01:54:52,873 [wrapper] pandaids: 7009870417
[2026-02-14 20:54:53] 2026-02-15 01:54:52,912 [wrapper] cleanup supervisor_pilot 11567 20860
[2026-02-14 20:54:53] 2026-02-15 01:54:52,916 [wrapper] Test setup, not cleaning
[2026-02-14 20:54:53] 2026-02-15 01:54:52,919 [wrapper] apfmon messages muted
[2026-02-14 20:54:53] 2026-02-15 01:54:52,923 [wrapper] ==== wrapper stdout END ====
[2026-02-14 20:54:53] 2026-02-15 01:54:52,927 [wrapper] ==== wrapper stderr END ====
[2026-02-14 20:54:53]  *** Error codes and diagnostics ***
[2026-02-14 20:54:53]     "exeErrorCode": 0,
[2026-02-14 20:54:53]     "exeErrorDiag": "",
[2026-02-14 20:54:53]     "pilotErrorCode": 0,
[2026-02-14 20:54:53]     "pilotErrorDiag": "",
[2026-02-14 20:54:53]  *** Listing of results directory ***
[2026-02-14 20:54:53] total 726480
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas    584627 Feb 14 17:22 pilot3.tar.gz
[2026-02-14 20:54:53] -rwx------ 1 boincer umatlas     36322 Feb 14 17:25 runpilot2-wrapper.sh
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas      5111 Feb 14 17:29 queuedata.json
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas       100 Feb 14 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-14 20:54:53] -rwxr-xr-x 1 boincer umatlas      7986 Feb 14 19:41 run_atlas
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas       105 Feb 14 19:41 job.xml
[2026-02-14 20:54:53] -rw-r--r-- 2 boincer umatlas 538015852 Feb 14 19:41 EVNT.48466711._000058.pool.root.1
[2026-02-14 20:54:53] -rw-r--r-- 2 boincer umatlas     15845 Feb 14 19:41 start_atlas.sh
[2026-02-14 20:54:53] drwxrwx--x 2 boincer umatlas      4096 Feb 14 19:41 shared
[2026-02-14 20:54:53] -rw-r--r-- 2 boincer umatlas    597941 Feb 14 19:41 input.tar.gz
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas         0 Feb 14 19:41 boinc_lockfile
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas      2498 Feb 14 19:41 pandaJob.out
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas        57 Feb 14 19:41 setup.sh.local
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas   1000926 Feb 14 19:41 agis_schedconf.cvmfs.json
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas   1513015 Feb 14 19:41 agis_ddmendpoints.agis.ALL.json
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas       445 Feb 14 19:41 workernode_map.json
[2026-02-14 20:54:53] drwx------ 5 boincer umatlas      4096 Feb 14 19:41 pilot3
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas      5953 Feb 14 20:47 init_data.xml
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas 199885531 Feb 14 20:53 HITS.48466714._001963.pool.root.1
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas      1046 Feb 14 20:54 memory_monitor_summary.json
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas       530 Feb 14 20:54 boinc_task_state.xml
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas    399495 Feb 14 20:54 log.48466714._001963.job.log.tgz.1
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas      6420 Feb 14 20:54 heartbeat.json
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas      8192 Feb 14 20:54 boinc_mmap_file
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas        27 Feb 14 20:54 wrapper_checkpoint.txt
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas        95 Feb 14 20:54 pilot_heartbeat.json
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas      5000 Feb 14 20:54 pilotlog.txt
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas    635759 Feb 14 20:54 log.48466714._001963.job.log.1
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas       357 Feb 14 20:54 output.list
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas       620 Feb 14 20:54 runtime_log
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas   1054720 Feb 14 20:54 result.tar.gz
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas      9343 Feb 14 20:54 runtime_log.err
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas       659 Feb 14 20:54 BqHODmKGdB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmG0nKDmFeo54n.diag
[2026-02-14 20:54:53] -rw-r--r-- 1 boincer umatlas     22621 Feb 14 20:54 stderr.txt
[2026-02-14 20:54:53] HITS file was successfully produced:
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas 199885531 Feb 14 20:53 shared/HITS.pool.root.1
[2026-02-14 20:54:53]  *** Contents of shared directory: ***
[2026-02-14 20:54:53] total 722252
[2026-02-14 20:54:53] -rw-r--r-- 2 boincer umatlas 538015852 Feb 14 19:41 ATLAS.root_0
[2026-02-14 20:54:53] -rw-r--r-- 2 boincer umatlas     15845 Feb 14 19:41 start_atlas.sh
[2026-02-14 20:54:53] -rw-r--r-- 2 boincer umatlas    597941 Feb 14 19:41 input.tar.gz
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas 199885531 Feb 14 20:53 HITS.pool.root.1
[2026-02-14 20:54:53] -rw------- 1 boincer umatlas   1054720 Feb 14 20:54 result.tar.gz
20:54:54 (16873): run_atlas exited; CPU time 47257.233313
20:54:54 (16873): called boinc_finish(0)

</stderr_txt>
]]>

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