Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
15:38:01 (772040): wrapper (7.7.26015): starting
15:38:01 (772040): wrapper: running run_atlas (--nthreads 4)
[2026-02-16 15:38:01] Arguments: --nthreads 4
[2026-02-16 15:38:01] Threads: 4
[2026-02-16 15:38:01] Checking for CVMFS
[2026-02-16 15:38:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 15:38:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 15:38:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 15:38:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 15:38:01] 2.13.3.0 11582 893 48220 156285 0 50 26668337 33554432 0 130560 0 509725 99.990 24487 208 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-16 15:38:01] CVMFS is ok
[2026-02-16 15:38:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 15:38:01] Checking for apptainer binary...
[2026-02-16 15:38:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-16 15:38:01] Running /usr/bin/apptainer --version
[2026-02-16 15:38:01] apptainer version 1.4.5
[2026-02-16 15:38:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 15:38:01] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-16 15:38:01] apptainer works
[2026-02-16 15:38:01] Set ATHENA_PROC_NUMBER=4
[2026-02-16 15:38:01] Set ATHENA_CORE_NUMBER=4
[2026-02-16 15:38:01] Starting ATLAS job with PandaID=7009777785
[2026-02-16 15:38:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 16:37:20]  *** The last 200 lines of the pilot log: ***
[2026-02-16 16:37:20]  filetype=log
[2026-02-16 16:37:20]  guid=5bbd1fc4-f090-4ab6-9e02-3aadbbf9e4b3
[2026-02-16 16:37:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-16 16:37:20]  is_altstaged=None
[2026-02-16 16:37:20]  is_tar=False
[2026-02-16 16:37:20]  lfn=log.48318034._018450.job.log.tgz.1
[2026-02-16 16:37:20]  mtime=0
[2026-02-16 16:37:20]  protocol_id=None
[2026-02-16 16:37:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-16 16:37:20]  replicas=None
[2026-02-16 16:37:20]  scope=mc23_13p6TeV
[2026-02-16 16:37:20]  status=None
[2026-02-16 16:37:20]  status_code=0
[2026-02-16 16:37:20]  storage_token=
[2026-02-16 16:37:20]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7009777785/log.48318034._018450.job.log.tgz.1
[2026-02-16 16:37:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/d0/log.48318034._018450.job.log.tgz.1
[2026-02-16 16:37:20]  workdir=None
[2026-02-16 16:37:20] ]
[2026-02-16 16:37:20] 2026-02-16 14:36:37,369 | INFO     | transferring file log.48318034._018450.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7009777785/log.48318034._018450.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-16 16:37:20] 2026-02-16 14:36:37,369 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7009777785/log.48318034._018450.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48318034._018450.job
[2026-02-16 16:37:20] 2026-02-16 14:36:37,378 | INFO     | adding to output.list: log.48318034._018450.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/d0/log.48318034._018450.job.log.tg
[2026-02-16 16:37:20] 2026-02-16 14:36:37,378 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-16 16:37:20] 2026-02-16 14:36:37,378 | INFO     | summary of transferred files:
[2026-02-16 16:37:20] 2026-02-16 14:36:37,378 | INFO     |  -- lfn=log.48318034._018450.job.log.tgz.1, status_code=0, status=transferred
[2026-02-16 16:37:20] 2026-02-16 14:36:37,378 | INFO     | stage-out finished correctly
[2026-02-16 16:37:20] 2026-02-16 14:36:37,592 | INFO     | time since job start (3507s) is within the limit (349056.0s)
[2026-02-16 16:37:20] 2026-02-16 14:36:38,499 | INFO     | monitor loop #269: job 0:7009777785 is in state 'finished'
[2026-02-16 16:37:20] 2026-02-16 14:36:38,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-16 16:37:20] 2026-02-16 14:36:39,597 | INFO     | time since job start (3509s) is within the limit (349056.0s)
[2026-02-16 16:37:20] 2026-02-16 14:36:39,817 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-16 16:37:20] 2026-02-16 14:36:40,636 | INFO     | job 7009777785 has state=finished
[2026-02-16 16:37:20] 2026-02-16 14:36:40,636 | INFO     | preparing for final server update for job 7009777785 in state='finished'
[2026-02-16 16:37:20] 2026-02-16 14:36:40,636 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7009777785/jobReport.json
[2026-02-16 16:37:20] 2026-02-16 14:36:40,637 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-16 16:37:20] 2026-02-16 14:36:40,637 | INFO     | this job has now completed (state=finished)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,637 | INFO     | log transfer has been attempted: DONE
[2026-02-16 16:37:20] 2026-02-16 14:36:40,637 | INFO     | job 7009777785 has finished - writing final server update
[2026-02-16 16:37:20] 2026-02-16 14:36:40,637 | INFO     | total number of processed events: 400 (read)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,639 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7009777785/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,639 | INFO     | extracted standard info from prmon json
[2026-02-16 16:37:20] 2026-02-16 14:36:40,639 | INFO     | extracted standard memory fields from prmon json
[2026-02-16 16:37:20] 2026-02-16 14:36:40,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-16 16:37:20] 2026-02-16 14:36:40,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-16 16:37:20] 2026-02-16 14:36:40,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | fitting pss+swap vs Time
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | sum of square deviations: 41117050.0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | sum of deviations: -7548160740.0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | mean x: 1771250936.0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | mean y: 2627705.9411764704
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | intersect: 325164252282.691
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | chi2: 0.09494064621440679
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | current memory leak: -183.58 B/s (using 51 data points, chi2=0.09)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | could have reported an average CPU frequency of 3416 MHz (5 samples)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | ..............................
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | . Timing measurements:
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | . get job = 0 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,640 | INFO     | . initial setup = 3 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,641 | INFO     | . payload setup = 2 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,641 | INFO     | . stage-in = 0 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,641 | INFO     | . payload execution = 3489 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,641 | INFO     | . stage-out = 0 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,641 | INFO     | . log creation = 0 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,641 | INFO     | ..............................
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | 
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | job summary report
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | --------------------------------------------------
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | PanDA job id: 7009777785
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | task id: 48318034
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | errors: (none)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | pilot state: finished 
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | transexitcode: 0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | exeerrorcode: 0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | exeerrordiag: 
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | exitcode: 0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | exitmsg: OK
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | cpuconsumptiontime: 13150 s
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | nevents: 400
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | neventsw: 0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | pid: 780502
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | pgrp: 780502
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | corecount: 4
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | event service: False
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | sizes: {0: 2282183, 11: 2282183, 3495: 2307999, 3496: 2316997, 3499: 2317279}
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | --------------------------------------------------
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | 
[2026-02-16 16:37:20] 2026-02-16 14:36:40,667 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | job 7009777785 has completed (purged errors)
[2026-02-16 16:37:20] 2026-02-16 14:36:40,676 | INFO     | overall cleanup function is called
[2026-02-16 16:37:20] 2026-02-16 14:36:41,682 | INFO     | --- collectZombieJob: --- 10, [780502]
[2026-02-16 16:37:20] 2026-02-16 14:36:41,682 | INFO     | zombie collector waiting for pid 780502
[2026-02-16 16:37:20] 2026-02-16 14:36:41,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-16 16:37:20] 2026-02-16 14:36:41,683 | INFO     | collected zombie processes
[2026-02-16 16:37:20] 2026-02-16 14:36:41,683 | INFO     | will attempt to kill all subprocesses of pid=780502
[2026-02-16 16:37:20] 2026-02-16 14:36:41,770 | INFO     | process IDs to be killed: [780502] (in reverse order)
[2026-02-16 16:37:20] 2026-02-16 14:36:41,797 | WARNING  | found no corresponding commands to process id(s)
[2026-02-16 16:37:20] 2026-02-16 14:36:41,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-16 16:37:20] 2026-02-16 14:36:41,800 | INFO     | did not find any defunct processes belonging to 780502
[2026-02-16 16:37:20] 2026-02-16 14:36:41,802 | INFO     | did not find any defunct processes belonging to 780502
[2026-02-16 16:37:20] 2026-02-16 14:36:41,802 | INFO     | ready for new job
[2026-02-16 16:37:20] 2026-02-16 14:36:41,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-16 16:37:20] 2026-02-16 14:36:41,803 | INFO     | **************************************
[2026-02-16 16:37:20] 2026-02-16 14:36:41,803 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-16 16:37:20] 2026-02-16 14:36:41,803 | INFO     | **************************************
[2026-02-16 16:37:20] 2026-02-16 14:36:41,803 | INFO     | 
[2026-02-16 16:37:20] 2026-02-16 14:36:41,804 | INFO     | architecture information:
[2026-02-16 16:37:20] 2026-02-16 14:36:41,804 | INFO     | executing command: cat /etc/os-release
[2026-02-16 16:37:20] 2026-02-16 14:36:41,810 | INFO     | cat /etc/os-release:
[2026-02-16 16:37:20] NAME="CentOS Linux"
[2026-02-16 16:37:20] VERSION="7 (Core)"
[2026-02-16 16:37:20] ID="centos"
[2026-02-16 16:37:20] ID_LIKE="rhel fedora"
[2026-02-16 16:37:20] VERSION_ID="7"
[2026-02-16 16:37:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-16 16:37:20] ANSI_COLOR="0;31"
[2026-02-16 16:37:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-16 16:37:20] HOME_URL="https://www.centos.org/"
[2026-02-16 16:37:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-16 16:37:20] 
[2026-02-16 16:37:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-16 16:37:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-16 16:37:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-16 16:37:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-16 16:37:20] 
[2026-02-16 16:37:20] 2026-02-16 14:36:41,810 | INFO     | **************************************
[2026-02-16 16:37:20] 2026-02-16 14:36:42,313 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-16 16:37:20] 2026-02-16 14:36:42,318 | INFO     | sufficient remaining disk space (59615739904 B)
[2026-02-16 16:37:20] 2026-02-16 14:36:42,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-16 16:37:20] 2026-02-16 14:36:42,318 | INFO     | current server update state: UPDATING_FINAL
[2026-02-16 16:37:20] 2026-02-16 14:36:42,318 | INFO     | update_server=False
[2026-02-16 16:37:20] 2026-02-16 14:36:42,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-16 16:37:20] 2026-02-16 14:36:42,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-16 16:37:20] 2026-02-16 14:36:42,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-16 16:37:20] 2026-02-16 14:36:42,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-16 16:37:20] 2026-02-16 14:36:42,319 | INFO     | aborting loop
[2026-02-16 16:37:20] 2026-02-16 14:36:42,485 | INFO     | all payload control threads have been joined
[2026-02-16 16:37:20] 2026-02-16 14:36:42,528 | INFO     | all job control threads have been joined
[2026-02-16 16:37:20] 2026-02-16 14:36:42,672 | INFO     | all data control threads have been joined
[2026-02-16 16:37:20] 2026-02-16 14:36:42,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-16 16:37:20] 2026-02-16 14:36:43,323 | INFO     | [job] job monitor thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,324 | INFO     | [job] retrieve thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,324 | INFO     | [job] queue monitor thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,488 | INFO     | [payload] control thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,533 | INFO     | [job] control thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,587 | INFO     | [payload] validate_post thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,677 | INFO     | [data] control thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,730 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,752 | INFO     | [job] validate thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,868 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:43,939 | INFO     | [data] copytool_in thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:44,098 | INFO     | [payload] failed_post thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:44,665 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:44,916 | INFO     | [data] copytool_out thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:46,323 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:36:53,156 | INFO     | job.realtimelogging is not enabled
[2026-02-16 16:37:20] 2026-02-16 14:36:54,161 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 16:37:20] 2026-02-16 14:37:11,654 | INFO     | 3515s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-16 16:37:20] 2026-02-16 14:37:12,756 | INFO     | PID=775887 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-16 16:37:20] 2026-02-16 14:37:12,756 | INFO     | found 0 job(s) in 20 queues
[2026-02-16 16:37:20] 2026-02-16 14:37:12,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-16 16:37:20] 2026-02-16 14:37:12,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-16 16:37:20] 2026-02-16 14:37:13,545 | INFO     | [monitor] cgroup control has ended
[2026-02-16 16:37:20] 2026-02-16 14:37:14,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240060667712)>', '<ExcThread(monitor, started 140239708337920)>']
[2026-02-16 16:37:20] 2026-02-16 14:37:15,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 16:37:20] 2026-02-16 14:37:15,766 | INFO     | [monitor] control thread has ended
[2026-02-16 16:37:20] 2026-02-16 14:37:19,899 | INFO     | all workflow threads have been joined
[2026-02-16 16:37:20] 2026-02-16 14:37:19,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 16:37:20] 2026-02-16 14:37:19,899 | INFO     | traces error code: 0
[2026-02-16 16:37:20] 2026-02-16 14:37:19,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 16:37:20] 2026-02-16 14:37:19,945 [wrapper] ==== pilot stdout END ====
[2026-02-16 16:37:20] 2026-02-16 14:37:19,947 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 16:37:20] 2026-02-16 14:37:19,948 [wrapper] pilotpid: 775887
[2026-02-16 16:37:20] 2026-02-16 14:37:19,950 [wrapper] Pilot exit status: 0
[2026-02-16 16:37:20] 2026-02-16 14:37:19,955 [wrapper] pandaids: 7009777785
[2026-02-16 16:37:20] 2026-02-16 14:37:19,975 [wrapper] cleanup supervisor_pilot  817501 775888
[2026-02-16 16:37:20] 2026-02-16 14:37:19,976 [wrapper] Test setup, not cleaning
[2026-02-16 16:37:20] 2026-02-16 14:37:19,978 [wrapper] apfmon messages muted
[2026-02-16 16:37:20] 2026-02-16 14:37:19,979 [wrapper] ==== wrapper stdout END ====
[2026-02-16 16:37:20] 2026-02-16 14:37:19,981 [wrapper] ==== wrapper stderr END ====
[2026-02-16 16:37:20]  *** Error codes and diagnostics ***
[2026-02-16 16:37:20]     "exeErrorCode": 0,
[2026-02-16 16:37:20]     "exeErrorDiag": "",
[2026-02-16 16:37:20]     "pilotErrorCode": 0,
[2026-02-16 16:37:20]     "pilotErrorDiag": "",
[2026-02-16 16:37:20]  *** Listing of results directory ***
[2026-02-16 16:37:20] total 668136
[2026-02-16 16:37:20] -rw-r--r-- 1 ek ek    584627 Feb 15 00:22 pilot3.tar.gz
[2026-02-16 16:37:20] -rwx------ 1 ek ek     36322 Feb 15 00:25 runpilot2-wrapper.sh
[2026-02-16 16:37:20] -rw-r--r-- 1 ek ek      5111 Feb 15 00:28 queuedata.json
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek       100 Feb 16 15:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 16:37:20] -rwxr-xr-x 1 ek ek      7986 Feb 16 15:38 run_atlas
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek       105 Feb 16 15:38 job.xml
[2026-02-16 16:37:20] -rw-r--r-- 2 ek ek 497748293 Feb 16 15:38 EVNT.48318032._000331.pool.root.1
[2026-02-16 16:37:20] -rw-r--r-- 2 ek ek    597961 Feb 16 15:38 input.tar.gz
[2026-02-16 16:37:20] -rw-r--r-- 2 ek ek     15845 Feb 16 15:38 start_atlas.sh
[2026-02-16 16:37:20] drwxrwx--x 2 ek ek      4096 Feb 16 15:38 shared
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek         0 Feb 16 15:38 boinc_setup_complete
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek      9840 Feb 16 15:38 init_data.xml
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek         0 Feb 16 15:38 boinc_lockfile
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek      2537 Feb 16 15:38 pandaJob.out
[2026-02-16 16:37:20] -rw------- 1 ek ek        50 Feb 16 15:38 setup.sh.local
[2026-02-16 16:37:20] -rw------- 1 ek ek   1001137 Feb 16 15:38 agis_schedconf.cvmfs.json
[2026-02-16 16:37:20] -rw------- 1 ek ek   1513015 Feb 16 15:38 agis_ddmendpoints.agis.ALL.json
[2026-02-16 16:37:20] -rw------- 1 ek ek       433 Feb 16 15:38 workernode_map.json
[2026-02-16 16:37:20] drwx------ 5 ek ek      4096 Feb 16 15:38 pilot3
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek       530 Feb 16 16:36 boinc_task_state.xml
[2026-02-16 16:37:20] -rw------- 1 ek ek 180938887 Feb 16 16:36 HITS.48318034._018450.pool.root.1
[2026-02-16 16:37:20] -rw------- 1 ek ek        95 Feb 16 16:36 pilot_heartbeat.json
[2026-02-16 16:37:20] -rw------- 1 ek ek      1038 Feb 16 16:36 memory_monitor_summary.json
[2026-02-16 16:37:20] -rw------- 1 ek ek    243506 Feb 16 16:36 log.48318034._018450.job.log.tgz.1
[2026-02-16 16:37:20] -rw------- 1 ek ek      6350 Feb 16 16:36 heartbeat.json
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek      8192 Feb 16 16:37 boinc_mmap_file
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek        27 Feb 16 16:37 wrapper_checkpoint.txt
[2026-02-16 16:37:20] -rw------- 1 ek ek      4930 Feb 16 16:37 pilotlog.txt
[2026-02-16 16:37:20] -rw------- 1 ek ek    527279 Feb 16 16:37 log.48318034._018450.job.log.1
[2026-02-16 16:37:20] -rw------- 1 ek ek       357 Feb 16 16:37 output.list
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek       620 Feb 16 16:37 runtime_log
[2026-02-16 16:37:20] -rw------- 1 ek ek    788480 Feb 16 16:37 result.tar.gz
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek      9501 Feb 16 16:37 runtime_log.err
[2026-02-16 16:37:20] -rw------- 1 ek ek       665 Feb 16 16:37 rBfKDmJGdB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmszmKDmEDxIUo.diag
[2026-02-16 16:37:20] -rw-rw-r-- 1 ek ek     21102 Feb 16 16:37 stderr.txt
[2026-02-16 16:37:20] HITS file was successfully produced:
[2026-02-16 16:37:20] -rw------- 1 ek ek 180938887 Feb 16 16:36 shared/HITS.pool.root.1
[2026-02-16 16:37:20]  *** Contents of shared directory: ***
[2026-02-16 16:37:20] total 664164
[2026-02-16 16:37:20] -rw-r--r-- 2 ek ek 497748293 Feb 16 15:38 ATLAS.root_0
[2026-02-16 16:37:20] -rw-r--r-- 2 ek ek    597961 Feb 16 15:38 input.tar.gz
[2026-02-16 16:37:20] -rw-r--r-- 2 ek ek     15845 Feb 16 15:38 start_atlas.sh
[2026-02-16 16:37:20] -rw------- 1 ek ek 180938887 Feb 16 16:36 HITS.pool.root.1
[2026-02-16 16:37:20] -rw------- 1 ek ek    788480 Feb 16 16:37 result.tar.gz
16:37:21 (772040): run_atlas exited; CPU time 13178.842149
16:37:21 (772040): called boinc_finish(0)

</stderr_txt>
]]>

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