Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
06:21:27 (300829): wrapper (7.7.26015): starting
06:21:27 (300829): wrapper: running run_atlas (--nthreads 4)
[2026-02-16 06:21:27] Arguments: --nthreads 4
[2026-02-16 06:21:27] Threads: 4
[2026-02-16 06:21:27] Checking for CVMFS
[2026-02-16 06:21:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-16 06:21:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-16 06:21:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-16 06:21:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-16 06:21:27] 2.13.3.0 11582 336 43984 156267 3 188 26441335 33554433 0 130560 0 192727 99.999 49 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-16 06:21:27] CVMFS is ok
[2026-02-16 06:21:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-16 06:21:27] Checking for apptainer binary...
[2026-02-16 06:21:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-16 06:21:27] Running /usr/bin/apptainer --version
[2026-02-16 06:21:27] apptainer version 1.4.5
[2026-02-16 06:21:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-16 06:21:27] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-16 06:21:27] apptainer works
[2026-02-16 06:21:27] Set ATHENA_PROC_NUMBER=4
[2026-02-16 06:21:27] Set ATHENA_CORE_NUMBER=4
[2026-02-16 06:21:27] Starting ATLAS job with PandaID=7009881670
[2026-02-16 06:21:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-16 07:17:45]  *** The last 200 lines of the pilot log: ***
[2026-02-16 07:17:45]  filetype=log
[2026-02-16 07:17:45]  guid=e4f48cbb-6063-4126-ab29-22e46f737e58
[2026-02-16 07:17:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-16 07:17:45]  is_altstaged=None
[2026-02-16 07:17:45]  is_tar=False
[2026-02-16 07:17:45]  lfn=log.48318010._018279.job.log.tgz.1
[2026-02-16 07:17:45]  mtime=0
[2026-02-16 07:17:45]  protocol_id=None
[2026-02-16 07:17:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-16 07:17:45]  replicas=None
[2026-02-16 07:17:45]  scope=mc23_13p6TeV
[2026-02-16 07:17:45]  status=None
[2026-02-16 07:17:45]  status_code=0
[2026-02-16 07:17:45]  storage_token=
[2026-02-16 07:17:45]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7009881670/log.48318010._018279.job.log.tgz.1
[2026-02-16 07:17:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/f8/log.48318010._018279.job.log.tgz.1
[2026-02-16 07:17:45]  workdir=None
[2026-02-16 07:17:45] ]
[2026-02-16 07:17:45] 2026-02-16 05:16:54,136 | INFO     | transferring file log.48318010._018279.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7009881670/log.48318010._018279.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-16 07:17:45] 2026-02-16 05:16:54,136 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7009881670/log.48318010._018279.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48318010._018279.job
[2026-02-16 07:17:45] 2026-02-16 05:16:54,144 | INFO     | adding to output.list: log.48318010._018279.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/f8/log.48318010._018279.job.log.tg
[2026-02-16 07:17:45] 2026-02-16 05:16:54,144 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-16 07:17:45] 2026-02-16 05:16:54,144 | INFO     | summary of transferred files:
[2026-02-16 07:17:45] 2026-02-16 05:16:54,144 | INFO     |  -- lfn=log.48318010._018279.job.log.tgz.1, status_code=0, status=transferred
[2026-02-16 07:17:45] 2026-02-16 05:16:54,144 | INFO     | stage-out finished correctly
[2026-02-16 07:17:45] 2026-02-16 05:16:54,425 | INFO     | monitor loop #257: job 0:7009881670 is in state 'finished'
[2026-02-16 07:17:45] 2026-02-16 05:16:54,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-16 07:17:45] 2026-02-16 05:16:55,192 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-16 07:17:45] 2026-02-16 05:16:55,494 | INFO     | time since job start (3321s) is within the limit (349056.0s)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,586 | INFO     | PID=304683 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-16 07:17:45] 2026-02-16 05:16:56,927 | INFO     | monitor loop #258: job 0:7009881670 is in state 'finished'
[2026-02-16 07:17:45] 2026-02-16 05:16:56,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,940 | INFO     | job 7009881670 has state=finished
[2026-02-16 07:17:45] 2026-02-16 05:16:56,940 | INFO     | preparing for final server update for job 7009881670 in state='finished'
[2026-02-16 07:17:45] 2026-02-16 05:16:56,940 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7009881670/jobReport.json
[2026-02-16 07:17:45] 2026-02-16 05:16:56,941 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-16 07:17:45] 2026-02-16 05:16:56,941 | INFO     | this job has now completed (state=finished)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,941 | INFO     | log transfer has been attempted: DONE
[2026-02-16 07:17:45] 2026-02-16 05:16:56,941 | INFO     | job 7009881670 has finished - writing final server update
[2026-02-16 07:17:45] 2026-02-16 05:16:56,941 | INFO     | total number of processed events: 400 (read)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,943 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7009881670/memory_monitor_summary.json (trf name=prmon)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,943 | INFO     | extracted standard info from prmon json
[2026-02-16 07:17:45] 2026-02-16 05:16:56,943 | INFO     | extracted standard memory fields from prmon json
[2026-02-16 07:17:45] 2026-02-16 05:16:56,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-16 07:17:45] 2026-02-16 05:16:56,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-16 07:17:45] 2026-02-16 05:16:56,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | fitting pss+swap vs Time
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | sum of square deviations: 34277852.0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | sum of deviations: 336148796.0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | mean x: 1771217448.5
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | mean y: 2812203.5416666665
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | intersect: -17366788807.84805
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | chi2: 4.746808843229387e-05
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | current memory leak: 9.81 B/s (using 48 data points, chi2=0.00)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | could have reported an average CPU frequency of 2837 MHz (5 samples)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | ..............................
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . Timing measurements:
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . get job = 0 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . initial setup = 3 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . payload setup = 2 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . stage-in = 0 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . payload execution = 3301 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . stage-out = 0 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | . log creation = 0 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,944 | INFO     | ..............................
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | 
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | job summary report
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | --------------------------------------------------
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | PanDA job id: 7009881670
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | task id: 48318010
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | errors: (none)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | pilot state: finished 
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | transexitcode: 0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | exeerrorcode: 0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | exeerrordiag: 
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | exitcode: 0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | exitmsg: OK
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | cpuconsumptiontime: 12497 s
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | nevents: 400
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | neventsw: 0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | pid: 309518
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | pgrp: 309518
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | corecount: 4
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | event service: False
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | sizes: {0: 2282175, 10: 2282175, 3307: 2307872, 3309: 2316870, 3310: 2316926, 3312: 2317152}
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | --------------------------------------------------
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | 
[2026-02-16 07:17:45] 2026-02-16 05:16:56,970 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-16 07:17:45] 2026-02-16 05:16:56,978 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,978 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,978 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | job 7009881670 has completed (purged errors)
[2026-02-16 07:17:45] 2026-02-16 05:16:56,979 | INFO     | overall cleanup function is called
[2026-02-16 07:17:45] 2026-02-16 05:16:57,986 | INFO     | --- collectZombieJob: --- 10, [309518]
[2026-02-16 07:17:45] 2026-02-16 05:16:57,986 | INFO     | zombie collector waiting for pid 309518
[2026-02-16 07:17:45] 2026-02-16 05:16:57,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-16 07:17:45] 2026-02-16 05:16:57,986 | INFO     | collected zombie processes
[2026-02-16 07:17:45] 2026-02-16 05:16:57,986 | INFO     | will attempt to kill all subprocesses of pid=309518
[2026-02-16 07:17:45] 2026-02-16 05:16:58,065 | INFO     | process IDs to be killed: [309518] (in reverse order)
[2026-02-16 07:17:45] 2026-02-16 05:16:58,092 | WARNING  | found no corresponding commands to process id(s)
[2026-02-16 07:17:45] 2026-02-16 05:16:58,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-16 07:17:45] 2026-02-16 05:16:58,095 | INFO     | did not find any defunct processes belonging to 309518
[2026-02-16 07:17:45] 2026-02-16 05:16:58,097 | INFO     | did not find any defunct processes belonging to 309518
[2026-02-16 07:17:45] 2026-02-16 05:16:58,097 | INFO     | ready for new job
[2026-02-16 07:17:45] 2026-02-16 05:16:58,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-16 07:17:45] 2026-02-16 05:16:58,098 | INFO     | **************************************
[2026-02-16 07:17:45] 2026-02-16 05:16:58,098 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-16 07:17:45] 2026-02-16 05:16:58,098 | INFO     | **************************************
[2026-02-16 07:17:45] 2026-02-16 05:16:58,098 | INFO     | 
[2026-02-16 07:17:45] 2026-02-16 05:16:58,099 | INFO     | architecture information:
[2026-02-16 07:17:45] 2026-02-16 05:16:58,099 | INFO     | executing command: cat /etc/os-release
[2026-02-16 07:17:45] 2026-02-16 05:16:58,104 | INFO     | cat /etc/os-release:
[2026-02-16 07:17:45] NAME="CentOS Linux"
[2026-02-16 07:17:45] VERSION="7 (Core)"
[2026-02-16 07:17:45] ID="centos"
[2026-02-16 07:17:45] ID_LIKE="rhel fedora"
[2026-02-16 07:17:45] VERSION_ID="7"
[2026-02-16 07:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-16 07:17:45] ANSI_COLOR="0;31"
[2026-02-16 07:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-16 07:17:45] HOME_URL="https://www.centos.org/"
[2026-02-16 07:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-16 07:17:45] 
[2026-02-16 07:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-16 07:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-16 07:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-16 07:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-16 07:17:45] 
[2026-02-16 07:17:45] 2026-02-16 05:16:58,104 | INFO     | **************************************
[2026-02-16 07:17:45] 2026-02-16 05:16:58,605 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-16 07:17:45] 2026-02-16 05:16:58,611 | INFO     | sufficient remaining disk space (62922948608 B)
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | INFO     | current server update state: UPDATING_FINAL
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | INFO     | update_server=False
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | INFO     | aborting loop
[2026-02-16 07:17:45] 2026-02-16 05:16:58,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-16 07:17:45] 2026-02-16 05:16:58,964 | INFO     | all payload control threads have been joined
[2026-02-16 07:17:45] 2026-02-16 05:16:59,401 | INFO     | all job control threads have been joined
[2026-02-16 07:17:45] 2026-02-16 05:16:59,428 | INFO     | all data control threads have been joined
[2026-02-16 07:17:45] 2026-02-16 05:16:59,613 | INFO     | [job] retrieve thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:16:59,616 | INFO     | [job] job monitor thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:16:59,617 | INFO     | [job] queue monitor thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:16:59,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-16 07:17:45] 2026-02-16 05:16:59,884 | INFO     | [payload] failed_post thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:16:59,969 | INFO     | [payload] control thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:16:59,991 | INFO     | [payload] validate_post thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,407 | INFO     | [job] control thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,433 | INFO     | [data] control thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,469 | INFO     | [job] create_data_payload thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,469 | INFO     | [job] validate thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,595 | INFO     | [payload] validate_pre thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,701 | INFO     | [payload] execute_payloads thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:00,712 | INFO     | [data] copytool_in thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:01,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-16 07:17:45] 2026-02-16 05:17:01,682 | INFO     | [data] copytool_out thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:05,224 | INFO     | [data] queue_monitor thread has finished
[2026-02-16 07:17:45] 2026-02-16 05:17:28,730 | INFO     | PID=304683 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-16 07:17:45] 2026-02-16 05:17:28,731 | INFO     | found 0 job(s) in 20 queues
[2026-02-16 07:17:45] 2026-02-16 05:17:28,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-16 07:17:45] 2026-02-16 05:17:28,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-16 07:17:45] 2026-02-16 05:17:39,005 | INFO     | [monitor] cgroup control has ended
[2026-02-16 07:17:45] 2026-02-16 05:17:40,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222995679040)>', '<ExcThread(monitor, started 140222705968896)>']
[2026-02-16 07:17:45] 2026-02-16 05:17:40,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-16 07:17:45] 2026-02-16 05:17:40,781 | INFO     | [monitor] control thread has ended
[2026-02-16 07:17:45] 2026-02-16 05:17:45,025 | INFO     | all workflow threads have been joined
[2026-02-16 07:17:45] 2026-02-16 05:17:45,025 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-16 07:17:45] 2026-02-16 05:17:45,025 | INFO     | traces error code: 0
[2026-02-16 07:17:45] 2026-02-16 05:17:45,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-16 07:17:45] 2026-02-16 05:17:45,061 [wrapper] ==== pilot stdout END ====
[2026-02-16 07:17:45] 2026-02-16 05:17:45,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-16 07:17:45] 2026-02-16 05:17:45,064 [wrapper] pilotpid: 304683
[2026-02-16 07:17:45] 2026-02-16 05:17:45,065 [wrapper] Pilot exit status: 0
[2026-02-16 07:17:45] 2026-02-16 05:17:45,070 [wrapper] pandaids: 7009881670
[2026-02-16 07:17:45] 2026-02-16 05:17:45,090 [wrapper] cleanup supervisor_pilot  343494 304684
[2026-02-16 07:17:45] 2026-02-16 05:17:45,092 [wrapper] Test setup, not cleaning
[2026-02-16 07:17:45] 2026-02-16 05:17:45,093 [wrapper] apfmon messages muted
[2026-02-16 07:17:45] 2026-02-16 05:17:45,095 [wrapper] ==== wrapper stdout END ====
[2026-02-16 07:17:45] 2026-02-16 05:17:45,096 [wrapper] ==== wrapper stderr END ====
[2026-02-16 07:17:45]  *** Error codes and diagnostics ***
[2026-02-16 07:17:45]     "exeErrorCode": 0,
[2026-02-16 07:17:45]     "exeErrorDiag": "",
[2026-02-16 07:17:45]     "pilotErrorCode": 0,
[2026-02-16 07:17:45]     "pilotErrorDiag": "",
[2026-02-16 07:17:45]  *** Listing of results directory ***
[2026-02-16 07:17:45] total 671412
[2026-02-16 07:17:45] -rw-r--r-- 1 ek ek      5111 Feb 15 00:22 queuedata.json
[2026-02-16 07:17:45] -rw-r--r-- 1 ek ek    584627 Feb 15 00:22 pilot3.tar.gz
[2026-02-16 07:17:45] -rwx------ 1 ek ek     36322 Feb 15 00:22 runpilot2-wrapper.sh
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek       100 Feb 16 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-16 07:17:45] -rwxr-xr-x 1 ek ek      7986 Feb 16 06:21 run_atlas
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek       105 Feb 16 06:21 job.xml
[2026-02-16 07:17:45] -rw-r--r-- 2 ek ek 498228210 Feb 16 06:21 EVNT.48318008._000242.pool.root.1
[2026-02-16 07:17:45] drwxrwx--x 2 ek ek      4096 Feb 16 06:21 shared
[2026-02-16 07:17:45] -rw-r--r-- 2 ek ek    597962 Feb 16 06:21 input.tar.gz
[2026-02-16 07:17:45] -rw-r--r-- 2 ek ek     15845 Feb 16 06:21 start_atlas.sh
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek         0 Feb 16 06:21 boinc_setup_complete
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek      9840 Feb 16 06:21 init_data.xml
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek         0 Feb 16 06:21 boinc_lockfile
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek      2528 Feb 16 06:21 pandaJob.out
[2026-02-16 07:17:45] -rw------- 1 ek ek        50 Feb 16 06:21 setup.sh.local
[2026-02-16 07:17:45] -rw------- 1 ek ek   1000992 Feb 16 06:21 agis_schedconf.cvmfs.json
[2026-02-16 07:17:45] -rw------- 1 ek ek   1513015 Feb 16 06:21 agis_ddmendpoints.agis.ALL.json
[2026-02-16 07:17:45] -rw------- 1 ek ek       426 Feb 16 06:21 workernode_map.json
[2026-02-16 07:17:45] drwx------ 5 ek ek      4096 Feb 16 06:21 pilot3
[2026-02-16 07:17:45] -rw------- 1 ek ek 183818294 Feb 16 07:16 HITS.48318010._018279.pool.root.1
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek       530 Feb 16 07:16 boinc_task_state.xml
[2026-02-16 07:17:45] -rw------- 1 ek ek      1026 Feb 16 07:16 memory_monitor_summary.json
[2026-02-16 07:17:45] -rw------- 1 ek ek    264073 Feb 16 07:16 log.48318010._018279.job.log.tgz.1
[2026-02-16 07:17:45] -rw------- 1 ek ek        95 Feb 16 07:16 pilot_heartbeat.json
[2026-02-16 07:17:45] -rw------- 1 ek ek      6321 Feb 16 07:16 heartbeat.json
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek      8192 Feb 16 07:17 boinc_mmap_file
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek        27 Feb 16 07:17 wrapper_checkpoint.txt
[2026-02-16 07:17:45] -rw------- 1 ek ek      4743 Feb 16 07:17 pilotlog.txt
[2026-02-16 07:17:45] -rw------- 1 ek ek    502878 Feb 16 07:17 log.48318010._018279.job.log.1
[2026-02-16 07:17:45] -rw------- 1 ek ek       357 Feb 16 07:17 output.list
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek       620 Feb 16 07:17 runtime_log
[2026-02-16 07:17:45] -rw------- 1 ek ek    788480 Feb 16 07:17 result.tar.gz
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek      9501 Feb 16 07:17 runtime_log.err
[2026-02-16 07:17:45] -rw------- 1 ek ek       657 Feb 16 07:17 CtdMDmEDdB9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8qmKDmMNKCOn.diag
[2026-02-16 07:17:45] -rw-rw-r-- 1 ek ek     21241 Feb 16 07:17 stderr.txt
[2026-02-16 07:17:45] HITS file was successfully produced:
[2026-02-16 07:17:45] -rw------- 1 ek ek 183818294 Feb 16 07:16 shared/HITS.pool.root.1
[2026-02-16 07:17:45]  *** Contents of shared directory: ***
[2026-02-16 07:17:45] total 667444
[2026-02-16 07:17:45] -rw-r--r-- 2 ek ek 498228210 Feb 16 06:21 ATLAS.root_0
[2026-02-16 07:17:45] -rw-r--r-- 2 ek ek    597962 Feb 16 06:21 input.tar.gz
[2026-02-16 07:17:45] -rw-r--r-- 2 ek ek     15845 Feb 16 06:21 start_atlas.sh
[2026-02-16 07:17:45] -rw------- 1 ek ek 183818294 Feb 16 07:16 HITS.pool.root.1
[2026-02-16 07:17:45] -rw------- 1 ek ek    788480 Feb 16 07:17 result.tar.gz
07:17:46 (300829): run_atlas exited; CPU time 12526.156936
07:17:46 (300829): called boinc_finish(0)

</stderr_txt>
]]>

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