Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:20 (19611): wrapper (7.7.26015): starting
06:01:20 (19611): wrapper: running run_atlas (--nthreads 12)
[2026-02-13 06:01:20] Arguments: --nthreads 12
[2026-02-13 06:01:20] Threads: 12
[2026-02-13 06:01:20] Checking for CVMFS
[2026-02-13 06:01:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-13 06:01:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-13 06:01:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-13 06:01:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-13 06:01:20] 2.11.2.0 2998 217068 109312 156191 0 1 19412215 20275201 1 130560 0 89360814 99.935 11132219 34548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-13 06:01:20] CVMFS is ok
[2026-02-13 06:01:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-13 06:01:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-13 06:01:20] Further information can be found at the LHC@home message board.
[2026-02-13 06:01:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-13 06:01:20] Checking for apptainer binary...
[2026-02-13 06:01:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-13 06:01:20] Running /usr/bin/apptainer --version
[2026-02-13 06:01:20] apptainer version 1.3.2-1.el7
[2026-02-13 06:01:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-13 06:01:22] c-205-12.aglt2.org
[2026-02-13 06:01:22] apptainer works
[2026-02-13 06:01:22] Set ATHENA_PROC_NUMBER=12
[2026-02-13 06:01:22] Set ATHENA_CORE_NUMBER=12
[2026-02-13 06:01:22] Starting ATLAS job with PandaID=7013228394
[2026-02-13 06:01:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-13 07:45:20]  *** The last 200 lines of the pilot log: ***
[2026-02-13 07:45:20] 2026-02-13 12:44:47,691 | INFO     | sum of deviations: 1661292544.0000002
[2026-02-13 07:45:20] 2026-02-13 12:44:47,692 | INFO     | mean x: 1770984035.5
[2026-02-13 07:45:20] 2026-02-13 12:44:47,692 | INFO     | mean y: 2781842.6744186045
[2026-02-13 07:45:20] 2026-02-13 12:44:47,692 | INFO     | intersect: -14916424090.16151
[2026-02-13 07:45:20] 2026-02-13 12:44:47,692 | INFO     | chi2: 0.0013884774852148788
[2026-02-13 07:45:20] 2026-02-13 12:44:47,692 | INFO     | current chi2=0.0013884774852148788 (change=29.727746003715573 %)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,692 | INFO     | sum of square deviations: 164765880.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,693 | INFO     | sum of deviations: 1095905381.9999998
[2026-02-13 07:45:20] 2026-02-13 12:44:47,693 | INFO     | mean x: 1770984188.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,693 | INFO     | mean y: 2784498.950617284
[2026-02-13 07:45:20] 2026-02-13 12:44:47,693 | INFO     | intersect: -11776542040.416025
[2026-02-13 07:45:20] 2026-02-13 12:44:47,693 | INFO     | chi2: 0.0009732136302913988
[2026-02-13 07:45:20] 2026-02-13 12:44:47,693 | INFO     | current chi2=0.0009732136302913988 (change=29.90785657998728 %)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,694 | INFO     | sum of square deviations: 136095575.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,694 | INFO     | sum of deviations: 634083776.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,694 | INFO     | mean x: 1770984340.5
[2026-02-13 07:45:20] 2026-02-13 12:44:47,694 | INFO     | mean y: 2786954.3157894737
[2026-02-13 07:45:20] 2026-02-13 12:44:47,694 | INFO     | intersect: -8248417670.530461
[2026-02-13 07:45:20] 2026-02-13 12:44:47,694 | INFO     | chi2: 0.0005680780893712164
[2026-02-13 07:45:20] 2026-02-13 12:44:47,695 | INFO     | current chi2=0.0005680780893712164 (change=41.62863407481018 %)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,695 | INFO     | sum of square deviations: 110960220.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,695 | INFO     | sum of deviations: 278897490.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,695 | INFO     | mean x: 1770984493.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,695 | INFO     | mean y: 2789097.704225352
[2026-02-13 07:45:20] 2026-02-13 12:44:47,695 | INFO     | intersect: -4448564098.302619
[2026-02-13 07:45:20] 2026-02-13 12:44:47,696 | INFO     | chi2: 0.00019287858448956832
[2026-02-13 07:45:20] 2026-02-13 12:44:47,696 | INFO     | current chi2=0.00019287858448956832 (change=66.0471706094037 %)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,696 | INFO     | sum of square deviations: 89127252.5
[2026-02-13 07:45:20] 2026-02-13 12:44:47,696 | INFO     | sum of deviations: 86895597.99999999
[2026-02-13 07:45:20] 2026-02-13 12:44:47,696 | INFO     | mean x: 1770984645.5
[2026-02-13 07:45:20] 2026-02-13 12:44:47,696 | INFO     | mean y: 2790418.1515151514
[2026-02-13 07:45:20] 2026-02-13 12:44:47,697 | INFO     | intersect: -1723850597.9567788
[2026-02-13 07:45:20] 2026-02-13 12:44:47,697 | INFO     | chi2: 1.5740351813067745e-05
[2026-02-13 07:45:20] 2026-02-13 12:44:47,697 | INFO     | current chi2=1.5740351813067745e-05 (change=91.83924340033765 %)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,697 | INFO     | left removable region not found
[2026-02-13 07:45:20] 2026-02-13 12:44:47,697 | INFO     | sum of square deviations: 265828240.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,698 | INFO     | sum of deviations: 19238234290.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,698 | INFO     | mean x: 1770983395.0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,698 | INFO     | mean y: 2713153.8842105265
[2026-02-13 07:45:20] 2026-02-13 12:44:47,698 | INFO     | intersect: -128164984441.7874
[2026-02-13 07:45:20] 2026-02-13 12:44:47,698 | INFO     | chi2: 1.35726597186842
[2026-02-13 07:45:20] 2026-02-13 12:44:47,698 | INFO     | current memory leak: 72.37 B/s (using 95 data points, chi2=1.36)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | could have reported an average CPU frequency of 1718 MHz (7 samples)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | ..............................
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . Timing measurements:
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . get job = 0 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . initial setup = 7 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . payload setup = 7 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . stage-in = 0 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . payload execution = 6158 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,699 | INFO     | . stage-out = 0 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,700 | INFO     | . log creation = 0 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,700 | INFO     | ..............................
[2026-02-13 07:45:20] 2026-02-13 12:44:47,780 | INFO     | 
[2026-02-13 07:45:20] 2026-02-13 12:44:47,780 | INFO     | job summary report
[2026-02-13 07:45:20] 2026-02-13 12:44:47,780 | INFO     | --------------------------------------------------
[2026-02-13 07:45:20] 2026-02-13 12:44:47,780 | INFO     | PanDA job id: 7013228394
[2026-02-13 07:45:20] 2026-02-13 12:44:47,780 | INFO     | task id: 48431096
[2026-02-13 07:45:20] 2026-02-13 12:44:47,781 | INFO     | errors: (none)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,781 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-13 07:45:20] 2026-02-13 12:44:47,781 | INFO     | pilot state: finished 
[2026-02-13 07:45:20] 2026-02-13 12:44:47,781 | INFO     | transexitcode: 0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,781 | INFO     | exeerrorcode: 0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,781 | INFO     | exeerrordiag: 
[2026-02-13 07:45:20] 2026-02-13 12:44:47,782 | INFO     | exitcode: 0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,782 | INFO     | exitmsg: OK
[2026-02-13 07:45:20] 2026-02-13 12:44:47,782 | INFO     | cpuconsumptiontime: 67282 s
[2026-02-13 07:45:20] 2026-02-13 12:44:47,782 | INFO     | nevents: 400
[2026-02-13 07:45:20] 2026-02-13 12:44:47,782 | INFO     | neventsw: 0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,782 | INFO     | pid: 28205
[2026-02-13 07:45:20] 2026-02-13 12:44:47,783 | INFO     | pgrp: 28205
[2026-02-13 07:45:20] 2026-02-13 12:44:47,783 | INFO     | corecount: 12
[2026-02-13 07:45:20] 2026-02-13 12:44:47,783 | INFO     | event service: False
[2026-02-13 07:45:20] 2026-02-13 12:44:47,783 | INFO     | sizes: {0: 2282213, 11: 2282213, 6169: 2309002, 6170: 2318056, 6172: 2318194}
[2026-02-13 07:45:20] 2026-02-13 12:44:47,783 | INFO     | --------------------------------------------------
[2026-02-13 07:45:20] 2026-02-13 12:44:47,783 | INFO     | 
[2026-02-13 07:45:20] 2026-02-13 12:44:47,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-13 07:45:20] 2026-02-13 12:44:47,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,810 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,812 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,812 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-13 07:45:20] 2026-02-13 12:44:47,812 | INFO     | job 7013228394 has completed (purged errors)
[2026-02-13 07:45:20] 2026-02-13 12:44:47,813 | INFO     | overall cleanup function is called
[2026-02-13 07:45:20] 2026-02-13 12:44:48,820 | INFO     | --- collectZombieJob: --- 10, [28205]
[2026-02-13 07:45:20] 2026-02-13 12:44:48,820 | INFO     | zombie collector waiting for pid 28205
[2026-02-13 07:45:20] 2026-02-13 12:44:48,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-13 07:45:20] 2026-02-13 12:44:48,820 | INFO     | collected zombie processes
[2026-02-13 07:45:20] 2026-02-13 12:44:48,820 | INFO     | will attempt to kill all subprocesses of pid=28205
[2026-02-13 07:45:20] 2026-02-13 12:44:48,909 | INFO     | process IDs to be killed: [28205] (in reverse order)
[2026-02-13 07:45:20] 2026-02-13 12:44:48,962 | WARNING  | found no corresponding commands to process id(s)
[2026-02-13 07:45:20] 2026-02-13 12:44:48,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-13 07:45:20] 2026-02-13 12:44:48,966 | INFO     | did not find any defunct processes belonging to 28205
[2026-02-13 07:45:20] 2026-02-13 12:44:48,969 | INFO     | did not find any defunct processes belonging to 28205
[2026-02-13 07:45:20] 2026-02-13 12:44:48,970 | INFO     | ready for new job
[2026-02-13 07:45:20] 2026-02-13 12:44:48,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-13 07:45:20] 2026-02-13 12:44:48,971 | INFO     | **************************************
[2026-02-13 07:45:20] 2026-02-13 12:44:48,972 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-13 07:45:20] 2026-02-13 12:44:48,972 | INFO     | **************************************
[2026-02-13 07:45:20] 2026-02-13 12:44:48,972 | INFO     | 
[2026-02-13 07:45:20] 2026-02-13 12:44:48,972 | INFO     | architecture information:
[2026-02-13 07:45:20] 2026-02-13 12:44:48,973 | INFO     | executing command: cat /etc/os-release
[2026-02-13 07:45:20] 2026-02-13 12:44:48,988 | INFO     | cat /etc/os-release:
[2026-02-13 07:45:20] NAME="CentOS Linux"
[2026-02-13 07:45:20] VERSION="7 (Core)"
[2026-02-13 07:45:20] ID="centos"
[2026-02-13 07:45:20] ID_LIKE="rhel fedora"
[2026-02-13 07:45:20] VERSION_ID="7"
[2026-02-13 07:45:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-13 07:45:20] ANSI_COLOR="0;31"
[2026-02-13 07:45:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-13 07:45:20] HOME_URL="https://www.centos.org/"
[2026-02-13 07:45:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-13 07:45:20] 
[2026-02-13 07:45:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-13 07:45:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-13 07:45:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-13 07:45:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-13 07:45:20] 
[2026-02-13 07:45:20] 2026-02-13 12:44:48,988 | INFO     | **************************************
[2026-02-13 07:45:20] 2026-02-13 12:44:49,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-13 07:45:20] 2026-02-13 12:44:49,508 | INFO     | sufficient remaining disk space (28348252160 B)
[2026-02-13 07:45:20] 2026-02-13 12:44:49,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-13 07:45:20] 2026-02-13 12:44:49,509 | INFO     | current server update state: UPDATING_FINAL
[2026-02-13 07:45:20] 2026-02-13 12:44:49,509 | INFO     | update_server=False
[2026-02-13 07:45:20] 2026-02-13 12:44:49,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-13 07:45:20] 2026-02-13 12:44:49,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-13 07:45:20] 2026-02-13 12:44:49,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-13 07:45:20] 2026-02-13 12:44:50,121 | INFO     | all data control threads have been joined
[2026-02-13 07:45:20] 2026-02-13 12:44:50,313 | INFO     | all job control threads have been joined
[2026-02-13 07:45:20] 2026-02-13 12:44:50,514 | INFO     | [job] retrieve thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:50,515 | INFO     | [job] queue monitor thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:50,627 | INFO     | [job] create_data_payload thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:50,658 | INFO     | all payload control threads have been joined
[2026-02-13 07:45:20] 2026-02-13 12:44:50,841 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:50,861 | INFO     | [payload] validate_post thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:50,890 | INFO     | [payload] validate_pre thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:50,990 | INFO     | [payload] failed_post thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,037 | INFO     | [data] copytool_in thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,127 | INFO     | [data] control thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,318 | INFO     | [job] control thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,487 | WARNING  | process 28205 can no longer be monitored (due to stat problems) - aborting
[2026-02-13 07:45:20] 2026-02-13 12:44:51,515 | INFO     | [data] copytool_out thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,557 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-13 07:45:20] 2026-02-13 12:44:51,557 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-13 07:45:20] 2026-02-13 12:44:51,558 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-13 07:45:20] 2026-02-13 12:44:51,558 | WARNING  | maxPSS not found in memory monitor output
[2026-02-13 07:45:20] 2026-02-13 12:44:51,558 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7013228394/payload.stdout) since it has not been created yet
[2026-02-13 07:45:20] 2026-02-13 12:44:51,559 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-13 07:45:20] 2026-02-13 12:44:51,575 | INFO     | sufficient remaining disk space (28348252160 B)
[2026-02-13 07:45:20] 2026-02-13 12:44:51,576 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-13 07:45:20] 2026-02-13 12:44:51,576 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7013228394/HITS.48431096._035627.pool.root.1 since it does not exist
[2026-02-13 07:45:20] 2026-02-13 12:44:51,662 | INFO     | number of running child processes to parent process 28205: 1
[2026-02-13 07:45:20] 2026-02-13 12:44:51,662 | INFO     | maximum number of monitored processes: 6
[2026-02-13 07:45:20] 2026-02-13 12:44:51,662 | INFO     | aborting job monitoring since job object (job id=7013228394) has expired
[2026-02-13 07:45:20] 2026-02-13 12:44:51,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-13 07:45:20] 2026-02-13 12:44:51,662 | INFO     | will abort loop
[2026-02-13 07:45:20] 2026-02-13 12:44:51,664 | INFO     | [payload] control thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,915 | INFO     | [job] validate thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:51,982 | INFO     | [payload] execute_payloads thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:52,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-13 07:45:20] 2026-02-13 12:44:52,663 | INFO     | [job] job monitor thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:53,660 | INFO     | [monitor] cgroup control has ended
[2026-02-13 07:45:20] 2026-02-13 12:44:56,104 | INFO     | [data] queue_monitor thread has finished
[2026-02-13 07:45:20] 2026-02-13 12:44:56,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831397889856)>', '<ExcThread(monitor, started 139830293944064)>']
[2026-02-13 07:45:20] 2026-02-13 12:45:01,889 | INFO     | all workflow threads have been joined
[2026-02-13 07:45:20] 2026-02-13 12:45:01,889 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-13 07:45:20] 2026-02-13 12:45:01,889 | INFO     | traces error code: 0
[2026-02-13 07:45:20] 2026-02-13 12:45:01,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-13 07:45:20] 2026-02-13 12:45:20,196 | INFO     | PID=23771 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-13 07:45:20] 2026-02-13 12:45:20,197 | INFO     | found 0 job(s) in 20 queues
[2026-02-13 07:45:20] 2026-02-13 12:45:20,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-13 07:45:20] 2026-02-13 12:45:20,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-13 07:45:20] 2026-02-13 12:45:20,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-13 07:45:20] 2026-02-13 12:45:20,197 | INFO     | [monitor] control thread has ended
[2026-02-13 07:45:20] 2026-02-13 12:45:20,282 [wrapper] ==== pilot stdout END ====
[2026-02-13 07:45:20] 2026-02-13 12:45:20,286 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-13 07:45:20] 2026-02-13 12:45:20,290 [wrapper] pilotpid: 23771
[2026-02-13 07:45:20] 2026-02-13 12:45:20,294 [wrapper] Pilot exit status: 0
[2026-02-13 07:45:20] 2026-02-13 12:45:20,310 [wrapper] pandaids: 7013228394
[2026-02-13 07:45:20] 2026-02-13 12:45:20,349 [wrapper] cleanup supervisor_pilot 21344 23772
[2026-02-13 07:45:20] 2026-02-13 12:45:20,353 [wrapper] Test setup, not cleaning
[2026-02-13 07:45:20] 2026-02-13 12:45:20,357 [wrapper] apfmon messages muted
[2026-02-13 07:45:20] 2026-02-13 12:45:20,361 [wrapper] ==== wrapper stdout END ====
[2026-02-13 07:45:20] 2026-02-13 12:45:20,365 [wrapper] ==== wrapper stderr END ====
[2026-02-13 07:45:20]  *** Error codes and diagnostics ***
[2026-02-13 07:45:20]     "exeErrorCode": 0,
[2026-02-13 07:45:20]     "exeErrorDiag": "",
[2026-02-13 07:45:20]     "pilotErrorCode": 0,
[2026-02-13 07:45:20]     "pilotErrorDiag": "",
[2026-02-13 07:45:20]  *** Listing of results directory ***
[2026-02-13 07:45:20] total 937420
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas    584627 Feb 12 00:11 pilot3.tar.gz
[2026-02-13 07:45:20] -rwx------ 1 boincer umatlas     36322 Feb 12 00:12 runpilot2-wrapper.sh
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas      5111 Feb 12 00:12 queuedata.json
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas       100 Feb 13 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-13 07:45:20] -rwxr-xr-x 1 boincer umatlas      7986 Feb 13 06:01 run_atlas
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas       105 Feb 13 06:01 job.xml
[2026-02-13 07:45:20] -rw-r--r-- 2 boincer umatlas 672361126 Feb 13 06:01 EVNT.48431094._000172.pool.root.1
[2026-02-13 07:45:20] -rw-r--r-- 2 boincer umatlas     15845 Feb 13 06:01 start_atlas.sh
[2026-02-13 07:45:20] drwxrwx--x 2 boincer umatlas      4096 Feb 13 06:01 shared
[2026-02-13 07:45:20] -rw-r--r-- 2 boincer umatlas    597957 Feb 13 06:01 input.tar.gz
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas         0 Feb 13 06:01 boinc_lockfile
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas      2555 Feb 13 06:01 pandaJob.out
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas        57 Feb 13 06:01 setup.sh.local
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas   1000247 Feb 13 06:01 agis_schedconf.cvmfs.json
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas   1512955 Feb 13 06:01 agis_ddmendpoints.agis.ALL.json
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas       433 Feb 13 06:01 workernode_map.json
[2026-02-13 07:45:20] drwx------ 5 boincer umatlas      4096 Feb 13 06:01 pilot3
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas      5953 Feb 13 07:36 init_data.xml
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas       530 Feb 13 07:44 boinc_task_state.xml
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas 281041244 Feb 13 07:44 HITS.48431096._035627.pool.root.1
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas      1052 Feb 13 07:44 memory_monitor_summary.json
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas    402447 Feb 13 07:44 log.48431096._035627.job.log.tgz.1
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas      6415 Feb 13 07:44 heartbeat.json
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas        27 Feb 13 07:45 wrapper_checkpoint.txt
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas      8192 Feb 13 07:45 boinc_mmap_file
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas       745 Feb 13 07:45 pilotlog.txt
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas        95 Feb 13 07:45 pilot_heartbeat.json
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas    886299 Feb 13 07:45 log.48431096._035627.job.log.1
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas       357 Feb 13 07:45 output.list
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas       620 Feb 13 07:45 runtime_log
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas   1310720 Feb 13 07:45 result.tar.gz
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas      9343 Feb 13 07:45 runtime_log.err
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas       660 Feb 13 07:45 GLoKDm3AeA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrclKDmckzPhn.diag
[2026-02-13 07:45:20] -rw-r--r-- 1 boincer umatlas     21430 Feb 13 07:45 stderr.txt
[2026-02-13 07:45:20] HITS file was successfully produced:
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas 281041244 Feb 13 07:44 shared/HITS.pool.root.1
[2026-02-13 07:45:20]  *** Contents of shared directory: ***
[2026-02-13 07:45:20] total 932948
[2026-02-13 07:45:20] -rw-r--r-- 2 boincer umatlas 672361126 Feb 13 06:01 ATLAS.root_0
[2026-02-13 07:45:20] -rw-r--r-- 2 boincer umatlas     15845 Feb 13 06:01 start_atlas.sh
[2026-02-13 07:45:20] -rw-r--r-- 2 boincer umatlas    597957 Feb 13 06:01 input.tar.gz
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas 281041244 Feb 13 07:44 HITS.pool.root.1
[2026-02-13 07:45:20] -rw------- 1 boincer umatlas   1310720 Feb 13 07:45 result.tar.gz
07:45:22 (19611): run_atlas exited; CPU time 67245.309492
07:45:22 (19611): called boinc_finish(0)

</stderr_txt>
]]>

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