Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:08:22 (29397): wrapper (7.7.26015): starting
02:08:22 (29397): wrapper: running run_atlas (--nthreads 8)
[2026-02-13 02:08:22] Arguments: --nthreads 8
[2026-02-13 02:08:22] Threads: 8
[2026-02-13 02:08:22] Checking for CVMFS
[2026-02-13 02:08:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-13 02:08:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-13 02:08:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-13 02:08:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-13 02:08:24] 2.13.3.0 29543 0 25572 156177 4 1 3221849 4096000 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2026-02-13 02:08:24] CVMFS is ok
[2026-02-13 02:08:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-13 02:08:24] Checking for apptainer binary...
[2026-02-13 02:08:24] apptainer is not installed, using version from CVMFS
[2026-02-13 02:08:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-13 02:08:24] senture-c621e-l
[2026-02-13 02:08:24] apptainer works
[2026-02-13 02:08:24] Set ATHENA_PROC_NUMBER=8
[2026-02-13 02:08:24] Set ATHENA_CORE_NUMBER=8
[2026-02-13 02:08:24] Starting ATLAS job with PandaID=6996409840
[2026-02-13 02:08:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-13 03:15:52]  *** The last 200 lines of the pilot log: ***
[2026-02-13 03:15:52]  domain=
[2026-02-13 03:15:52]  filesize=335846
[2026-02-13 03:15:52]  filetype=log
[2026-02-13 03:15:52]  guid=c6e85d2b-fef7-4f1c-b9b8-ce98b30b532e
[2026-02-13 03:15:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-13 03:15:52]  is_altstaged=None
[2026-02-13 03:15:52]  is_tar=False
[2026-02-13 03:15:52]  lfn=log.48431113._003227.job.log.tgz.1
[2026-02-13 03:15:52]  mtime=0
[2026-02-13 03:15:52]  protocol_id=None
[2026-02-13 03:15:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-13 03:15:52]  replicas=None
[2026-02-13 03:15:52]  scope=mc23_13p6TeV
[2026-02-13 03:15:52]  status=None
[2026-02-13 03:15:52]  status_code=0
[2026-02-13 03:15:52]  storage_token=
[2026-02-13 03:15:52]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6996409840/log.48431113._003227.job.log.tgz.1
[2026-02-13 03:15:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/27/log.48431113._003227.job.log.tgz.1
[2026-02-13 03:15:52]  workdir=None
[2026-02-13 03:15:52] ]
[2026-02-13 03:15:52] 2026-02-13 03:14:58,867 | INFO     | transferring file log.48431113._003227.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6996409840/log.48431113._003227.job.log.tgz.1 to /var/lib/boinc
[2026-02-13 03:15:52] 2026-02-13 03:14:58,867 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6996409840/log.48431113._003227.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.484311
[2026-02-13 03:15:52] 2026-02-13 03:14:58,882 | INFO     | adding to output.list: log.48431113._003227.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/27/log.48431113._003227.job.log.tg
[2026-02-13 03:15:52] 2026-02-13 03:14:58,883 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-13 03:15:52] 2026-02-13 03:14:58,883 | INFO     | summary of transferred files:
[2026-02-13 03:15:52] 2026-02-13 03:14:58,883 | INFO     |  -- lfn=log.48431113._003227.job.log.tgz.1, status_code=0, status=transferred
[2026-02-13 03:15:52] 2026-02-13 03:14:58,883 | INFO     | stage-out finished correctly
[2026-02-13 03:15:52] 2026-02-13 03:14:59,831 | INFO     | monitor loop #308: job 0:6996409840 is in state 'finished'
[2026-02-13 03:15:52] 2026-02-13 03:14:59,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-13 03:15:52] 2026-02-13 03:15:00,162 | INFO     | time since job start (3979s) is within the limit (349056.0s)
[2026-02-13 03:15:52] 2026-02-13 03:15:00,184 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-13 03:15:52] 2026-02-13 03:15:01,679 | INFO     | job 6996409840 has state=finished
[2026-02-13 03:15:52] 2026-02-13 03:15:01,680 | INFO     | preparing for final server update for job 6996409840 in state='finished'
[2026-02-13 03:15:52] 2026-02-13 03:15:01,680 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6996409840/jobReport.json
[2026-02-13 03:15:52] 2026-02-13 03:15:01,681 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-13 03:15:52] 2026-02-13 03:15:01,681 | INFO     | this job has now completed (state=finished)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,681 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,681 | INFO     | log transfer has been attempted: DONE
[2026-02-13 03:15:52] 2026-02-13 03:15:01,681 | INFO     | job 6996409840 has finished - writing final server update
[2026-02-13 03:15:52] 2026-02-13 03:15:01,682 | INFO     | total number of processed events: 400 (read)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,683 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6996409840/memory_monitor_summary.json (trf name=prmon)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,684 | INFO     | extracted standard info from prmon json
[2026-02-13 03:15:52] 2026-02-13 03:15:01,684 | INFO     | extracted standard memory fields from prmon json
[2026-02-13 03:15:52] 2026-02-13 03:15:01,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-13 03:15:52] 2026-02-13 03:15:01,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-13 03:15:52] 2026-02-13 03:15:01,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | fitting pss+swap vs Time
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | sum of square deviations: 60482994.5
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | sum of deviations: -1126537965.4999998
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | mean x: 1770950584.5
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | mean y: 2617084.0172413792
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | intersect: 32987807135.473198
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | chi2: 0.05692078243767423
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | current memory leak: -18.63 B/s (using 58 data points, chi2=0.06)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | could have reported an average CPU frequency of 2600 MHz (6 samples)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,685 | INFO     | ..............................
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . Timing measurements:
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . get job = 0 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . initial setup = 5 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . payload setup = 5 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . stage-in = 0 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . payload execution = 3957 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . stage-out = 0 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | . log creation = 0 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,686 | INFO     | ..............................
[2026-02-13 03:15:52] 2026-02-13 03:15:01,723 | INFO     | 
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | job summary report
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | --------------------------------------------------
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | PanDA job id: 6996409840
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | task id: 48431113
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | errors: (none)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | pilot state: finished 
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | transexitcode: 0
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | exeerrorcode: 0
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | exeerrordiag: 
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | exitcode: 0
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | exitmsg: OK
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | cpuconsumptiontime: 30004 s
[2026-02-13 03:15:52] 2026-02-13 03:15:01,724 | INFO     | nevents: 400
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | neventsw: 0
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | pid: 38197
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | pgrp: 38197
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | corecount: 8
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | event service: False
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | sizes: {0: 2282255, 11: 2282255, 3966: 2317205, 3967: 2317205, 3969: 2317399}
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | --------------------------------------------------
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | 
[2026-02-13 03:15:52] 2026-02-13 03:15:01,725 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | job 6996409840 has completed (purged errors)
[2026-02-13 03:15:52] 2026-02-13 03:15:01,758 | INFO     | overall cleanup function is called
[2026-02-13 03:15:52] 2026-02-13 03:15:02,765 | INFO     | --- collectZombieJob: --- 10, [38197]
[2026-02-13 03:15:52] 2026-02-13 03:15:02,766 | INFO     | zombie collector waiting for pid 38197
[2026-02-13 03:15:52] 2026-02-13 03:15:02,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-13 03:15:52] 2026-02-13 03:15:02,767 | INFO     | collected zombie processes
[2026-02-13 03:15:52] 2026-02-13 03:15:02,767 | INFO     | will attempt to kill all subprocesses of pid=38197
[2026-02-13 03:15:52] 2026-02-13 03:15:02,820 | INFO     | process IDs to be killed: [38197] (in reverse order)
[2026-02-13 03:15:52] 2026-02-13 03:15:02,864 | WARNING  | found no corresponding commands to process id(s)
[2026-02-13 03:15:52] 2026-02-13 03:15:02,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-13 03:15:52] 2026-02-13 03:15:02,866 | INFO     | did not find any defunct processes belonging to 38197
[2026-02-13 03:15:52] 2026-02-13 03:15:02,867 | INFO     | did not find any defunct processes belonging to 38197
[2026-02-13 03:15:52] 2026-02-13 03:15:02,867 | INFO     | ready for new job
[2026-02-13 03:15:52] 2026-02-13 03:15:02,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-13 03:15:52] 2026-02-13 03:15:02,869 | INFO     | **************************************
[2026-02-13 03:15:52] 2026-02-13 03:15:02,869 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-13 03:15:52] 2026-02-13 03:15:02,869 | INFO     | **************************************
[2026-02-13 03:15:52] 2026-02-13 03:15:02,869 | INFO     | 
[2026-02-13 03:15:52] 2026-02-13 03:15:02,869 | INFO     | pilot is running in a VM
[2026-02-13 03:15:52] 2026-02-13 03:15:02,869 | INFO     | architecture information:
[2026-02-13 03:15:52] 2026-02-13 03:15:02,870 | INFO     | executing command: cat /etc/os-release
[2026-02-13 03:15:52] 2026-02-13 03:15:02,883 | INFO     | cat /etc/os-release:
[2026-02-13 03:15:52] NAME="CentOS Linux"
[2026-02-13 03:15:52] VERSION="7 (Core)"
[2026-02-13 03:15:52] ID="centos"
[2026-02-13 03:15:52] ID_LIKE="rhel fedora"
[2026-02-13 03:15:52] VERSION_ID="7"
[2026-02-13 03:15:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-13 03:15:52] ANSI_COLOR="0;31"
[2026-02-13 03:15:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-13 03:15:52] HOME_URL="https://www.centos.org/"
[2026-02-13 03:15:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-13 03:15:52] 
[2026-02-13 03:15:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-13 03:15:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-13 03:15:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-13 03:15:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-13 03:15:52] 
[2026-02-13 03:15:52] 2026-02-13 03:15:02,884 | INFO     | **************************************
[2026-02-13 03:15:52] 2026-02-13 03:15:03,387 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-13 03:15:52] 2026-02-13 03:15:03,404 | INFO     | sufficient remaining disk space (117683781632 B)
[2026-02-13 03:15:52] 2026-02-13 03:15:03,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-13 03:15:52] 2026-02-13 03:15:03,404 | INFO     | current server update state: UPDATING_FINAL
[2026-02-13 03:15:52] 2026-02-13 03:15:03,404 | INFO     | update_server=False
[2026-02-13 03:15:52] 2026-02-13 03:15:03,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-13 03:15:52] 2026-02-13 03:15:03,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-13 03:15:52] 2026-02-13 03:15:03,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-13 03:15:52] 2026-02-13 03:15:03,405 | INFO     | aborting loop
[2026-02-13 03:15:52] 2026-02-13 03:15:03,518 | INFO     | all payload control threads have been joined
[2026-02-13 03:15:52] 2026-02-13 03:15:03,528 | INFO     | all data control threads have been joined
[2026-02-13 03:15:52] 2026-02-13 03:15:04,142 | INFO     | all job control threads have been joined
[2026-02-13 03:15:52] 2026-02-13 03:15:04,410 | INFO     | [job] retrieve thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:04,410 | INFO     | [job] queue monitor thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:04,411 | INFO     | [job] job monitor thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:04,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-13 03:15:52] 2026-02-13 03:15:04,524 | INFO     | [payload] control thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:04,534 | INFO     | [data] control thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,001 | INFO     | [payload] failed_post thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,148 | INFO     | [job] control thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,327 | INFO     | [job] validate thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,409 | INFO     | [payload] execute_payloads thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,440 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,444 | INFO     | [payload] validate_pre thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,469 | INFO     | [job] create_data_payload thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,583 | INFO     | [data] copytool_in thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:05,842 | INFO     | [payload] validate_post thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:06,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-13 03:15:52] 2026-02-13 03:15:06,435 | INFO     | [data] copytool_out thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:10,235 | INFO     | [data] queue_monitor thread has finished
[2026-02-13 03:15:52] 2026-02-13 03:15:33,267 | INFO     | PID=33713 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-13 03:15:52] 2026-02-13 03:15:33,268 | INFO     | found 0 job(s) in 20 queues
[2026-02-13 03:15:52] 2026-02-13 03:15:33,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-13 03:15:52] 2026-02-13 03:15:33,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-13 03:15:52] 2026-02-13 03:15:46,183 | INFO     | [monitor] cgroup control has ended
[2026-02-13 03:15:52] 2026-02-13 03:15:47,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138948309157696)>', '<ExcThread(monitor, started 138947627841280)>']
[2026-02-13 03:15:52] 2026-02-13 03:15:47,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-13 03:15:52] 2026-02-13 03:15:47,337 | INFO     | [monitor] control thread has ended
[2026-02-13 03:15:52] 2026-02-13 03:15:52,216 | INFO     | all workflow threads have been joined
[2026-02-13 03:15:52] 2026-02-13 03:15:52,216 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-13 03:15:52] 2026-02-13 03:15:52,216 | INFO     | traces error code: 0
[2026-02-13 03:15:52] 2026-02-13 03:15:52,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-13 03:15:52] 2026-02-13 03:15:52,302 [wrapper] ==== pilot stdout END ====
[2026-02-13 03:15:52] 2026-02-13 03:15:52,306 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-13 03:15:52] 2026-02-13 03:15:52,310 [wrapper] pilotpid: 33713
[2026-02-13 03:15:52] 2026-02-13 03:15:52,313 [wrapper] Pilot exit status: 0
[2026-02-13 03:15:52] 2026-02-13 03:15:52,322 [wrapper] pandaids: 6996409840
[2026-02-13 03:15:52] 2026-02-13 03:15:52,348 [wrapper] cleanup supervisor_pilot   44315 33714
[2026-02-13 03:15:52] 2026-02-13 03:15:52,351 [wrapper] Test setup, not cleaning
[2026-02-13 03:15:52] 2026-02-13 03:15:52,354 [wrapper] apfmon messages muted
[2026-02-13 03:15:52] 2026-02-13 03:15:52,358 [wrapper] ==== wrapper stdout END ====
[2026-02-13 03:15:52] 2026-02-13 03:15:52,361 [wrapper] ==== wrapper stderr END ====
[2026-02-13 03:15:52]  *** Error codes and diagnostics ***
[2026-02-13 03:15:52]     "exeErrorCode": 0,
[2026-02-13 03:15:52]     "exeErrorDiag": "",
[2026-02-13 03:15:52]     "pilotErrorCode": 0,
[2026-02-13 03:15:52]     "pilotErrorDiag": "",
[2026-02-13 03:15:52]  *** Listing of results directory ***
[2026-02-13 03:15:52] total 900880
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc    584627 Feb  6 07:38 pilot3.tar.gz
[2026-02-13 03:15:52] -rwx------ 1 boinc boinc     36322 Feb  6 07:39 runpilot2-wrapper.sh
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc      5111 Feb  6 07:39 queuedata.json
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc       100 Feb 13 02:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-13 03:15:52] -rwxr-xr-x 1 boinc boinc      7986 Feb 13 02:08 run_atlas
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc       105 Feb 13 02:08 job.xml
[2026-02-13 03:15:52] -rw-r--r-- 2 boinc boinc 648212985 Feb 13 02:08 EVNT.48431111._000065.pool.root.1
[2026-02-13 03:15:52] drwxrwx--x 2 boinc boinc      4096 Feb 13 02:08 shared
[2026-02-13 03:15:52] -rw-r--r-- 2 boinc boinc    597954 Feb 13 02:08 input.tar.gz
[2026-02-13 03:15:52] -rw-r--r-- 2 boinc boinc     15845 Feb 13 02:08 start_atlas.sh
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc         0 Feb 13 02:08 boinc_setup_complete
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc         0 Feb 13 02:08 boinc_lockfile
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc      2545 Feb 13 02:08 pandaJob.out
[2026-02-13 03:15:52] -rw------- 1 boinc boinc        50 Feb 13 02:08 setup.sh.local
[2026-02-13 03:15:52] -rw------- 1 boinc boinc   1000262 Feb 13 02:08 agis_schedconf.cvmfs.json
[2026-02-13 03:15:52] -rw------- 1 boinc boinc   1512955 Feb 13 02:08 agis_ddmendpoints.agis.ALL.json
[2026-02-13 03:15:52] -rw------- 1 boinc boinc       425 Feb 13 02:08 workernode_map.json
[2026-02-13 03:15:52] drwx------ 5 boinc boinc      4096 Feb 13 02:08 pilot3
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc      6673 Feb 13 02:54 init_data.xml
[2026-02-13 03:15:52] -rw------- 1 boinc boinc 268497439 Feb 13 03:14 HITS.48431113._003227.pool.root.1
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc       530 Feb 13 03:14 boinc_task_state.xml
[2026-02-13 03:15:52] -rw------- 1 boinc boinc      1033 Feb 13 03:14 memory_monitor_summary.json
[2026-02-13 03:15:52] -rw------- 1 boinc boinc    335846 Feb 13 03:14 log.48431113._003227.job.log.tgz.1
[2026-02-13 03:15:52] -rw------- 1 boinc boinc        95 Feb 13 03:15 pilot_heartbeat.json
[2026-02-13 03:15:52] -rw------- 1 boinc boinc      6336 Feb 13 03:15 heartbeat.json
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc      8192 Feb 13 03:15 boinc_mmap_file
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc        27 Feb 13 03:15 wrapper_checkpoint.txt
[2026-02-13 03:15:52] -rw------- 1 boinc boinc      4812 Feb 13 03:15 pilotlog.txt
[2026-02-13 03:15:52] -rw------- 1 boinc boinc    593740 Feb 13 03:15 log.48431113._003227.job.log.1
[2026-02-13 03:15:52] -rw------- 1 boinc boinc       357 Feb 13 03:15 output.list
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc       620 Feb 13 03:15 runtime_log
[2026-02-13 03:15:52] -rw------- 1 boinc boinc    942080 Feb 13 03:15 result.tar.gz
[2026-02-13 03:15:52] -rw------- 1 boinc boinc       648 Feb 13 03:15 Zy6KDmHcV88n9Rq4apOajLDm4fhM0noT9bVooX4SDmwxXKDmeVq7Em.diag
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc      9423 Feb 13 03:15 runtime_log.err
[2026-02-13 03:15:52] -rw-r--r-- 1 boinc boinc     20806 Feb 13 03:15 stderr.txt
[2026-02-13 03:15:52] HITS file was successfully produced:
[2026-02-13 03:15:52] -rw------- 1 boinc boinc 268497439 Feb 13 03:14 shared/HITS.pool.root.1
[2026-02-13 03:15:52]  *** Contents of shared directory: ***
[2026-02-13 03:15:52] total 896760
[2026-02-13 03:15:52] -rw-r--r-- 2 boinc boinc 648212985 Feb 13 02:08 ATLAS.root_0
[2026-02-13 03:15:52] -rw-r--r-- 2 boinc boinc    597954 Feb 13 02:08 input.tar.gz
[2026-02-13 03:15:52] -rw-r--r-- 2 boinc boinc     15845 Feb 13 02:08 start_atlas.sh
[2026-02-13 03:15:52] -rw------- 1 boinc boinc 268497439 Feb 13 03:14 HITS.pool.root.1
[2026-02-13 03:15:52] -rw------- 1 boinc boinc    942080 Feb 13 03:15 result.tar.gz
03:15:53 (29397): run_atlas exited; CPU time 30014.273479
03:15:53 (29397): called boinc_finish(0)

</stderr_txt>
]]>

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