Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:35:51 (12959): wrapper (7.7.26015): starting
16:35:51 (12959): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 16:35:51] Arguments: --nthreads 12
[2026-02-12 16:35:51] Threads: 12
[2026-02-12 16:35:51] Checking for CVMFS
[2026-02-12 16:35:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 16:35:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 16:35:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 16:35:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 16:35:51] 2.11.2.0 2937 400549 98940 156171 3 52 20150999 20275201 1 130560 1 173639381 99.953 24121374 17730 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 16:35:51] CVMFS is ok
[2026-02-12 16:35:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 16:35:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 16:35:51] Further information can be found at the LHC@home message board.
[2026-02-12 16:35:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 16:35:51] Checking for apptainer binary...
[2026-02-12 16:35:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 16:35:51] Running /usr/bin/apptainer --version
[2026-02-12 16:35:51] apptainer version 1.3.2-1.el7
[2026-02-12 16:35:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 16:35:53] c-205-8.aglt2.org
[2026-02-12 16:35:53] apptainer works
[2026-02-12 16:35:53] Set ATHENA_PROC_NUMBER=12
[2026-02-12 16:35:53] Set ATHENA_CORE_NUMBER=12
[2026-02-12 16:35:53] Starting ATLAS job with PandaID=7014016683
[2026-02-12 16:35:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 18:20:28]  *** The last 200 lines of the pilot log: ***
[2026-02-12 18:20:28] 2026-02-12 23:19:42,033 | INFO     | log transfer has been attempted: DONE
[2026-02-12 18:20:28] 2026-02-12 23:19:42,034 | INFO     | job 7014016683 has finished - writing final server update
[2026-02-12 18:20:28] 2026-02-12 23:19:42,034 | INFO     | total number of processed events: 400 (read)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,037 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7014016683/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,038 | INFO     | extracted standard info from prmon json
[2026-02-12 18:20:28] 2026-02-12 23:19:42,038 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 18:20:28] 2026-02-12 23:19:42,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 18:20:28] 2026-02-12 23:19:42,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 18:20:28] 2026-02-12 23:19:42,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 18:20:28] 2026-02-12 23:19:42,041 | INFO     | fitting pss+swap vs Time
[2026-02-12 18:20:28] 2026-02-12 23:19:42,041 | INFO     | sum of square deviations: 329031285.5
[2026-02-12 18:20:28] 2026-02-12 23:19:42,042 | INFO     | sum of deviations: -4962321817.999999
[2026-02-12 18:20:28] 2026-02-12 23:19:42,042 | INFO     | mean x: 1770935277.5
[2026-02-12 18:20:28] 2026-02-12 23:19:42,042 | INFO     | mean y: 2765755.274509804
[2026-02-12 18:20:28] 2026-02-12 23:19:42,042 | INFO     | intersect: 26711322518.95689
[2026-02-12 18:20:28] 2026-02-12 23:19:42,042 | INFO     | chi2: 2.330542638551565
[2026-02-12 18:20:28] 2026-02-12 23:19:42,042 | INFO     | sum of square deviations: 282974608.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,043 | INFO     | sum of deviations: 2927018387.9999976
[2026-02-12 18:20:28] 2026-02-12 23:19:42,043 | INFO     | mean x: 1770935125.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,043 | INFO     | mean y: 2790899.9484536084
[2026-02-12 18:20:28] 2026-02-12 23:19:42,043 | INFO     | intersect: -18315317963.126904
[2026-02-12 18:20:28] 2026-02-12 23:19:42,043 | INFO     | chi2: 1.5575546500095516
[2026-02-12 18:20:28] 2026-02-12 23:19:42,044 | INFO     | current chi2=1.5575546500095516 (change=33.167725651328404 %)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,044 | INFO     | sum of square deviations: 241429643.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,044 | INFO     | sum of deviations: 3317388741.9999995
[2026-02-12 18:20:28] 2026-02-12 23:19:42,044 | INFO     | mean x: 1770934972.5
[2026-02-12 18:20:28] 2026-02-12 23:19:42,044 | INFO     | mean y: 2792337.652173913
[2026-02-12 18:20:28] 2026-02-12 23:19:42,045 | INFO     | intersect: -24330921068.806282
[2026-02-12 18:20:28] 2026-02-12 23:19:42,045 | INFO     | chi2: 1.560992374758553
[2026-02-12 18:20:28] 2026-02-12 23:19:42,045 | INFO     | current chi2=1.560992374758553 (change=-0.22071294570500688 %)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,045 | INFO     | right removable region: 91
[2026-02-12 18:20:28] 2026-02-12 23:19:42,045 | INFO     | sum of square deviations: 282974608.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | sum of deviations: -21744685128.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | mean x: 1770935430.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | mean y: 2820236.154639175
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | intersect: 136087232825.46118
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | chi2: 0.9283820947679603
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | current chi2=0.9283820947679603 (change=60.16455226303214 %)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,046 | INFO     | sum of square deviations: 241429643.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,047 | INFO     | sum of deviations: -21550616677.999996
[2026-02-12 18:20:28] 2026-02-12 23:19:42,047 | INFO     | mean x: 1770935582.5
[2026-02-12 18:20:28] 2026-02-12 23:19:42,047 | INFO     | mean y: 2819256.782608696
[2026-02-12 18:20:28] 2026-02-12 23:19:42,047 | INFO     | intersect: 158080979940.17535
[2026-02-12 18:20:28] 2026-02-12 23:19:42,047 | INFO     | chi2: 0.8909928227044872
[2026-02-12 18:20:28] 2026-02-12 23:19:42,048 | INFO     | current chi2=0.8909928227044872 (change=4.027358161492565 %)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,048 | INFO     | left removable region: 20
[2026-02-12 18:20:28] 2026-02-12 23:19:42,048 | INFO     | sum of square deviations: 110960220.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,048 | INFO     | sum of deviations: -8372747516.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,048 | INFO     | mean x: 1770935552.0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,048 | INFO     | mean y: 2834320.408450704
[2026-02-12 18:20:28] 2026-02-12 23:19:42,049 | INFO     | intersect: 133632672509.30254
[2026-02-12 18:20:28] 2026-02-12 23:19:42,049 | INFO     | chi2: 0.06237366268872334
[2026-02-12 18:20:28] 2026-02-12 23:19:42,049 | INFO     | current memory leak: -75.46 B/s (using 71 data points, chi2=0.06)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,049 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,049 | INFO     | ..............................
[2026-02-12 18:20:28] 2026-02-12 23:19:42,049 | INFO     | . Timing measurements:
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . get job = 0 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . initial setup = 7 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . payload setup = 7 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . stage-in = 0 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . payload execution = 6183 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . stage-out = 0 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | . log creation = 0 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,050 | INFO     | ..............................
[2026-02-12 18:20:28] 2026-02-12 23:19:42,073 | INFO     | time since job start (6209s) is within the limit (349056.0s)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,619 | INFO     | 
[2026-02-12 18:20:28] 2026-02-12 23:19:42,620 | INFO     | job summary report
[2026-02-12 18:20:28] 2026-02-12 23:19:42,620 | INFO     | --------------------------------------------------
[2026-02-12 18:20:28] 2026-02-12 23:19:42,620 | INFO     | PanDA job id: 7014016683
[2026-02-12 18:20:28] 2026-02-12 23:19:42,620 | INFO     | task id: 48431096
[2026-02-12 18:20:28] 2026-02-12 23:19:42,620 | INFO     | errors: (none)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,620 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 18:20:28] 2026-02-12 23:19:42,621 | INFO     | pilot state: finished 
[2026-02-12 18:20:28] 2026-02-12 23:19:42,621 | INFO     | transexitcode: 0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,621 | INFO     | exeerrorcode: 0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,621 | INFO     | exeerrordiag: 
[2026-02-12 18:20:28] 2026-02-12 23:19:42,621 | INFO     | exitcode: 0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,621 | INFO     | exitmsg: OK
[2026-02-12 18:20:28] 2026-02-12 23:19:42,622 | INFO     | cpuconsumptiontime: 68356 s
[2026-02-12 18:20:28] 2026-02-12 23:19:42,622 | INFO     | nevents: 400
[2026-02-12 18:20:28] 2026-02-12 23:19:42,622 | INFO     | neventsw: 0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,622 | INFO     | pid: 21126
[2026-02-12 18:20:28] 2026-02-12 23:19:42,622 | INFO     | pgrp: 21126
[2026-02-12 18:20:28] 2026-02-12 23:19:42,622 | INFO     | corecount: 12
[2026-02-12 18:20:28] 2026-02-12 23:19:42,623 | INFO     | event service: False
[2026-02-12 18:20:28] 2026-02-12 23:19:42,623 | INFO     | sizes: {0: 2282164, 11: 2282164, 6193: 2309104, 6195: 2318102, 6197: 2318352}
[2026-02-12 18:20:28] 2026-02-12 23:19:42,623 | INFO     | --------------------------------------------------
[2026-02-12 18:20:28] 2026-02-12 23:19:42,623 | INFO     | 
[2026-02-12 18:20:28] 2026-02-12 23:19:42,623 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-12 18:20:28] 2026-02-12 23:19:42,649 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,649 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 18:20:28] 2026-02-12 23:19:42,652 | INFO     | job 7014016683 has completed (purged errors)
[2026-02-12 18:20:28] 2026-02-12 23:19:42,652 | INFO     | overall cleanup function is called
[2026-02-12 18:20:28] 2026-02-12 23:19:43,661 | INFO     | --- collectZombieJob: --- 10, [21126]
[2026-02-12 18:20:28] 2026-02-12 23:19:43,661 | INFO     | zombie collector waiting for pid 21126
[2026-02-12 18:20:28] 2026-02-12 23:19:43,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 18:20:28] 2026-02-12 23:19:43,661 | INFO     | collected zombie processes
[2026-02-12 18:20:28] 2026-02-12 23:19:43,662 | INFO     | will attempt to kill all subprocesses of pid=21126
[2026-02-12 18:20:28] 2026-02-12 23:19:43,749 | INFO     | process IDs to be killed: [21126] (in reverse order)
[2026-02-12 18:20:28] 2026-02-12 23:19:43,806 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 18:20:28] 2026-02-12 23:19:43,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 18:20:28] 2026-02-12 23:19:43,810 | INFO     | did not find any defunct processes belonging to 21126
[2026-02-12 18:20:28] 2026-02-12 23:19:43,812 | INFO     | did not find any defunct processes belonging to 21126
[2026-02-12 18:20:28] 2026-02-12 23:19:43,813 | INFO     | ready for new job
[2026-02-12 18:20:28] 2026-02-12 23:19:43,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 18:20:28] 2026-02-12 23:19:43,814 | INFO     | **************************************
[2026-02-12 18:20:28] 2026-02-12 23:19:43,814 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 18:20:28] 2026-02-12 23:19:43,814 | INFO     | **************************************
[2026-02-12 18:20:28] 2026-02-12 23:19:43,814 | INFO     | 
[2026-02-12 18:20:28] 2026-02-12 23:19:43,815 | INFO     | architecture information:
[2026-02-12 18:20:28] 2026-02-12 23:19:43,816 | INFO     | executing command: cat /etc/os-release
[2026-02-12 18:20:28] 2026-02-12 23:19:43,831 | INFO     | cat /etc/os-release:
[2026-02-12 18:20:28] NAME="CentOS Linux"
[2026-02-12 18:20:28] VERSION="7 (Core)"
[2026-02-12 18:20:28] ID="centos"
[2026-02-12 18:20:28] ID_LIKE="rhel fedora"
[2026-02-12 18:20:28] VERSION_ID="7"
[2026-02-12 18:20:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 18:20:28] ANSI_COLOR="0;31"
[2026-02-12 18:20:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 18:20:28] HOME_URL="https://www.centos.org/"
[2026-02-12 18:20:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 18:20:28] 
[2026-02-12 18:20:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 18:20:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 18:20:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 18:20:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 18:20:28] 
[2026-02-12 18:20:28] 2026-02-12 23:19:43,831 | INFO     | **************************************
[2026-02-12 18:20:28] 2026-02-12 23:19:44,334 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-12 18:20:28] 2026-02-12 23:19:44,352 | INFO     | sufficient remaining disk space (26387415040 B)
[2026-02-12 18:20:28] 2026-02-12 23:19:44,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 18:20:28] 2026-02-12 23:19:44,352 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 18:20:28] 2026-02-12 23:19:44,352 | INFO     | update_server=False
[2026-02-12 18:20:28] 2026-02-12 23:19:44,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 18:20:28] 2026-02-12 23:19:44,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:20:28] 2026-02-12 23:19:44,353 | INFO     | aborting loop
[2026-02-12 18:20:28] 2026-02-12 23:19:44,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 18:20:28] 2026-02-12 23:19:45,042 | INFO     | all data control threads have been joined
[2026-02-12 18:20:28] 2026-02-12 23:19:45,358 | INFO     | [job] retrieve thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:45,359 | INFO     | [job] job monitor thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:45,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 18:20:28] 2026-02-12 23:19:45,401 | INFO     | all job control threads have been joined
[2026-02-12 18:20:28] 2026-02-12 23:19:45,405 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:45,417 | INFO     | [job] validate thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:45,539 | INFO     | all payload control threads have been joined
[2026-02-12 18:20:28] 2026-02-12 23:19:45,784 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:45,806 | INFO     | [payload] validate_post thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:46,048 | INFO     | [data] control thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:46,119 | INFO     | [data] copytool_in thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:46,329 | INFO     | [payload] failed_post thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:46,402 | INFO     | [job] control thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:46,545 | INFO     | [payload] control thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:46,842 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:47,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:20:28] 2026-02-12 23:19:47,388 | INFO     | [data] copytool_out thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:48,144 | INFO     | [job] queue monitor thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:48,360 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:19:54,840 | INFO     | job.realtimelogging is not enabled
[2026-02-12 18:20:28] 2026-02-12 23:19:55,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 18:20:28] 2026-02-12 23:20:15,279 | INFO     | PID=16746 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 18:20:28] 2026-02-12 23:20:15,279 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 18:20:28] 2026-02-12 23:20:15,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 18:20:28] 2026-02-12 23:20:15,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 18:20:28] 2026-02-12 23:20:22,822 | INFO     | [monitor] cgroup control has ended
[2026-02-12 18:20:28] 2026-02-12 23:20:22,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172357797696)>', '<ExcThread(monitor, started 140171458623232)>']
[2026-02-12 18:20:28] 2026-02-12 23:20:23,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 18:20:28] 2026-02-12 23:20:23,320 | INFO     | [monitor] control thread has ended
[2026-02-12 18:20:28] 2026-02-12 23:20:27,892 | INFO     | all workflow threads have been joined
[2026-02-12 18:20:28] 2026-02-12 23:20:27,900 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 18:20:28] 2026-02-12 23:20:27,900 | INFO     | traces error code: 0
[2026-02-12 18:20:28] 2026-02-12 23:20:27,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 18:20:28] 2026-02-12 23:20:27,988 [wrapper] ==== pilot stdout END ====
[2026-02-12 18:20:28] 2026-02-12 23:20:27,993 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 18:20:28] 2026-02-12 23:20:27,997 [wrapper] pilotpid: 16746
[2026-02-12 18:20:28] 2026-02-12 23:20:28,000 [wrapper] Pilot exit status: 0
[2026-02-12 18:20:28] 2026-02-12 23:20:28,016 [wrapper] pandaids: 7014016683
[2026-02-12 18:20:28] 2026-02-12 23:20:28,059 [wrapper] cleanup supervisor_pilot 14619 16747
[2026-02-12 18:20:28] 2026-02-12 23:20:28,063 [wrapper] Test setup, not cleaning
[2026-02-12 18:20:28] 2026-02-12 23:20:28,068 [wrapper] apfmon messages muted
[2026-02-12 18:20:28] 2026-02-12 23:20:28,071 [wrapper] ==== wrapper stdout END ====
[2026-02-12 18:20:28] 2026-02-12 23:20:28,076 [wrapper] ==== wrapper stderr END ====
[2026-02-12 18:20:28]  *** Error codes and diagnostics ***
[2026-02-12 18:20:28]     "exeErrorCode": 0,
[2026-02-12 18:20:28]     "exeErrorDiag": "",
[2026-02-12 18:20:28]     "pilotErrorCode": 0,
[2026-02-12 18:20:28]     "pilotErrorDiag": "",
[2026-02-12 18:20:28]  *** Listing of results directory ***
[2026-02-12 18:20:28] total 953052
[2026-02-12 18:20:28] -rwx------ 1 boincer umatlas     36322 Feb 12 11:21 runpilot2-wrapper.sh
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas      5111 Feb 12 11:21 queuedata.json
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas    584627 Feb 12 11:21 pilot3.tar.gz
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas       100 Feb 12 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 18:20:28] -rwxr-xr-x 1 boincer umatlas      7986 Feb 12 16:35 run_atlas
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas       105 Feb 12 16:35 job.xml
[2026-02-12 18:20:28] -rw-r--r-- 2 boincer umatlas 683613159 Feb 12 16:35 EVNT.48431094._000071.pool.root.1
[2026-02-12 18:20:28] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 16:35 start_atlas.sh
[2026-02-12 18:20:28] drwxrwx--x 2 boincer umatlas      4096 Feb 12 16:35 shared
[2026-02-12 18:20:28] -rw-r--r-- 2 boincer umatlas    597959 Feb 12 16:35 input.tar.gz
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas         0 Feb 12 16:35 boinc_lockfile
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas      2556 Feb 12 16:35 pandaJob.out
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas        57 Feb 12 16:35 setup.sh.local
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas   1000246 Feb 12 16:36 agis_schedconf.cvmfs.json
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas   1512955 Feb 12 16:36 agis_ddmendpoints.agis.ALL.json
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas       444 Feb 12 16:36 workernode_map.json
[2026-02-12 18:20:28] drwx------ 5 boincer umatlas      4096 Feb 12 16:36 pilot3
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas      5950 Feb 12 18:12 init_data.xml
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas       530 Feb 12 18:18 boinc_task_state.xml
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas 285769158 Feb 12 18:19 HITS.48431096._040418.pool.root.1
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas        95 Feb 12 18:19 pilot_heartbeat.json
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas      1047 Feb 12 18:19 memory_monitor_summary.json
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas    416816 Feb 12 18:19 log.48431096._040418.job.log.tgz.1
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas      6422 Feb 12 18:19 heartbeat.json
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas      8192 Feb 12 18:20 boinc_mmap_file
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas        27 Feb 12 18:20 wrapper_checkpoint.txt
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas      4814 Feb 12 18:20 pilotlog.txt
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas    887984 Feb 12 18:20 log.48431096._040418.job.log.1
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas       357 Feb 12 18:20 output.list
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas       620 Feb 12 18:20 runtime_log
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas   1320960 Feb 12 18:20 result.tar.gz
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas       659 Feb 12 18:20 YWxMDmccoA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpSmKDmtEvYfn.diag
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas      9338 Feb 12 18:20 runtime_log.err
[2026-02-12 18:20:28] -rw-r--r-- 1 boincer umatlas     20986 Feb 12 18:20 stderr.txt
[2026-02-12 18:20:28] HITS file was successfully produced:
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas 285769158 Feb 12 18:19 shared/HITS.pool.root.1
[2026-02-12 18:20:28]  *** Contents of shared directory: ***
[2026-02-12 18:20:28] total 948564
[2026-02-12 18:20:28] -rw-r--r-- 2 boincer umatlas 683613159 Feb 12 16:35 ATLAS.root_0
[2026-02-12 18:20:28] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 16:35 start_atlas.sh
[2026-02-12 18:20:28] -rw-r--r-- 2 boincer umatlas    597959 Feb 12 16:35 input.tar.gz
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas 285769158 Feb 12 18:19 HITS.pool.root.1
[2026-02-12 18:20:28] -rw------- 1 boincer umatlas   1320960 Feb 12 18:20 result.tar.gz
18:20:29 (12959): run_atlas exited; CPU time 68340.039218
18:20:29 (12959): called boinc_finish(0)

</stderr_txt>
]]>

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