Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:02 (5112): wrapper (7.7.26015): starting
16:20:02 (5112): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 16:20:02] Arguments: --nthreads 12
[2026-02-12 16:20:02] Threads: 12
[2026-02-12 16:20:02] Checking for CVMFS
[2026-02-12 16:20:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 16:20:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 16:20:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 16:20:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 16:20:02] 2.11.2.0 2998 400487 103516 156171 3 1 19563919 20275201 1 130560 1 172119326 99.951 23795460 17495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 16:20:02] CVMFS is ok
[2026-02-12 16:20:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 16:20:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 16:20:02] Further information can be found at the LHC@home message board.
[2026-02-12 16:20:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 16:20:02] Checking for apptainer binary...
[2026-02-12 16:20:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 16:20:02] Running /usr/bin/apptainer --version
[2026-02-12 16:20:02] apptainer version 1.3.2-1.el7
[2026-02-12 16:20:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 16:20:04] c-205-25.aglt2.org
[2026-02-12 16:20:04] apptainer works
[2026-02-12 16:20:04] Set ATHENA_PROC_NUMBER=12
[2026-02-12 16:20:04] Set ATHENA_CORE_NUMBER=12
[2026-02-12 16:20:04] Starting ATLAS job with PandaID=7014038390
[2026-02-12 16:20:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 18:05:43]  *** The last 200 lines of the pilot log: ***
[2026-02-12 18:05:43] 2026-02-12 23:05:08,848 | INFO     | mean x: 1770934359.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,848 | INFO     | mean y: 2830301.2718446604
[2026-02-12 18:05:43] 2026-02-12 23:05:08,848 | INFO     | intersect: -17388473658.098354
[2026-02-12 18:05:43] 2026-02-12 23:05:08,848 | INFO     | chi2: 1.7252074720058912
[2026-02-12 18:05:43] 2026-02-12 23:05:08,849 | INFO     | sum of square deviations: 291817564.5
[2026-02-12 18:05:43] 2026-02-12 23:05:08,849 | INFO     | sum of deviations: 4293461149.000008
[2026-02-12 18:05:43] 2026-02-12 23:05:08,849 | INFO     | mean x: 1770934206.5
[2026-02-12 18:05:43] 2026-02-12 23:05:08,849 | INFO     | mean y: 2833444.6938775512
[2026-02-12 18:05:43] 2026-02-12 23:05:08,849 | INFO     | intersect: -26052613992.373974
[2026-02-12 18:05:43] 2026-02-12 23:05:08,850 | INFO     | chi2: 1.7278075548209106
[2026-02-12 18:05:43] 2026-02-12 23:05:08,850 | INFO     | current chi2=1.7278075548209106 (change=-0.15071131195579274 %)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,850 | INFO     | right removable region: 97
[2026-02-12 18:05:43] 2026-02-12 23:05:08,850 | INFO     | sum of square deviations: 291817564.5
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | sum of deviations: -15446718900.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | mean x: 1770934511.5
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | mean y: 2890134.3469387754
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | intersect: 93743401046.77118
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | chi2: 0.16606402212139226
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | current chi2=0.16606402212139226 (change=90.37425788978815 %)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,851 | INFO     | sum of square deviations: 249388862.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,852 | INFO     | sum of deviations: -17919430516.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,852 | INFO     | mean x: 1770934664.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,852 | INFO     | mean y: 2898681.795698925
[2026-02-12 18:05:43] 2026-02-12 23:05:08,852 | INFO     | intersect: 127250524760.31642
[2026-02-12 18:05:43] 2026-02-12 23:05:08,852 | INFO     | chi2: 0.06657654138183508
[2026-02-12 18:05:43] 2026-02-12 23:05:08,852 | INFO     | current chi2=0.06657654138183508 (change=59.90911184051182 %)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,853 | INFO     | sum of square deviations: 211285822.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,853 | INFO     | sum of deviations: -16375398393.999998
[2026-02-12 18:05:43] 2026-02-12 23:05:08,853 | INFO     | mean x: 1770934816.5
[2026-02-12 18:05:43] 2026-02-12 23:05:08,853 | INFO     | mean y: 2892473.772727273
[2026-02-12 18:05:43] 2026-02-12 23:05:08,853 | INFO     | intersect: 137256603468.12796
[2026-02-12 18:05:43] 2026-02-12 23:05:08,854 | INFO     | chi2: 0.06174123462176074
[2026-02-12 18:05:43] 2026-02-12 23:05:08,854 | INFO     | current chi2=0.06174123462176074 (change=7.262778539880143 %)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,854 | INFO     | left removable region: 30
[2026-02-12 18:05:43] 2026-02-12 23:05:08,854 | INFO     | sum of square deviations: 93240818.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,854 | INFO     | sum of deviations: -9166114492.000002
[2026-02-12 18:05:43] 2026-02-12 23:05:08,854 | INFO     | mean x: 1770935091.0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,855 | INFO     | mean y: 2870352.074626866
[2026-02-12 18:05:43] 2026-02-12 23:05:08,855 | INFO     | intersect: 174096085643.32657
[2026-02-12 18:05:43] 2026-02-12 23:05:08,855 | INFO     | chi2: 0.05167403307513572
[2026-02-12 18:05:43] 2026-02-12 23:05:08,855 | INFO     | current memory leak: -98.31 B/s (using 67 data points, chi2=0.05)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,855 | INFO     | could have reported an average CPU frequency of 1651 MHz (7 samples)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | ..............................
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . Timing measurements:
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . get job = 0 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . initial setup = 7 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . payload setup = 7 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . stage-in = 0 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . payload execution = 6259 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . stage-out = 0 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,856 | INFO     | . log creation = 0 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,857 | INFO     | ..............................
[2026-02-12 18:05:43] 2026-02-12 23:05:08,934 | INFO     | 
[2026-02-12 18:05:43] 2026-02-12 23:05:08,934 | INFO     | job summary report
[2026-02-12 18:05:43] 2026-02-12 23:05:08,934 | INFO     | --------------------------------------------------
[2026-02-12 18:05:43] 2026-02-12 23:05:08,935 | INFO     | PanDA job id: 7014038390
[2026-02-12 18:05:43] 2026-02-12 23:05:08,935 | INFO     | task id: 48431096
[2026-02-12 18:05:43] 2026-02-12 23:05:08,935 | INFO     | errors: (none)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,935 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 18:05:43] 2026-02-12 23:05:08,935 | INFO     | pilot state: finished 
[2026-02-12 18:05:43] 2026-02-12 23:05:08,935 | INFO     | transexitcode: 0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,936 | INFO     | exeerrorcode: 0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,936 | INFO     | exeerrordiag: 
[2026-02-12 18:05:43] 2026-02-12 23:05:08,936 | INFO     | exitcode: 0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,936 | INFO     | exitmsg: OK
[2026-02-12 18:05:43] 2026-02-12 23:05:08,936 | INFO     | cpuconsumptiontime: 68359 s
[2026-02-12 18:05:43] 2026-02-12 23:05:08,936 | INFO     | nevents: 400
[2026-02-12 18:05:43] 2026-02-12 23:05:08,937 | INFO     | neventsw: 0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,937 | INFO     | pid: 14360
[2026-02-12 18:05:43] 2026-02-12 23:05:08,937 | INFO     | pgrp: 14360
[2026-02-12 18:05:43] 2026-02-12 23:05:08,937 | INFO     | corecount: 12
[2026-02-12 18:05:43] 2026-02-12 23:05:08,937 | INFO     | event service: False
[2026-02-12 18:05:43] 2026-02-12 23:05:08,937 | INFO     | sizes: {0: 2281780, 1: 2282241, 11: 2282241, 6270: 2309187, 6271: 2318240, 6274: 2318562}
[2026-02-12 18:05:43] 2026-02-12 23:05:08,938 | INFO     | --------------------------------------------------
[2026-02-12 18:05:43] 2026-02-12 23:05:08,938 | INFO     | 
[2026-02-12 18:05:43] 2026-02-12 23:05:08,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-12 18:05:43] 2026-02-12 23:05:08,962 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,962 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,962 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,963 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,964 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,964 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,964 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | job 7014038390 has completed (purged errors)
[2026-02-12 18:05:43] 2026-02-12 23:05:08,965 | INFO     | overall cleanup function is called
[2026-02-12 18:05:43] 2026-02-12 23:05:09,972 | INFO     | --- collectZombieJob: --- 10, [14360]
[2026-02-12 18:05:43] 2026-02-12 23:05:09,978 | INFO     | zombie collector waiting for pid 14360
[2026-02-12 18:05:43] 2026-02-12 23:05:09,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 18:05:43] 2026-02-12 23:05:09,979 | INFO     | collected zombie processes
[2026-02-12 18:05:43] 2026-02-12 23:05:09,979 | INFO     | will attempt to kill all subprocesses of pid=14360
[2026-02-12 18:05:43] 2026-02-12 23:05:10,076 | INFO     | process IDs to be killed: [14360] (in reverse order)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,134 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 18:05:43] 2026-02-12 23:05:10,137 | INFO     | did not find any defunct processes belonging to 14360
[2026-02-12 18:05:43] 2026-02-12 23:05:10,139 | INFO     | did not find any defunct processes belonging to 14360
[2026-02-12 18:05:43] 2026-02-12 23:05:10,139 | INFO     | ready for new job
[2026-02-12 18:05:43] 2026-02-12 23:05:10,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 18:05:43] 2026-02-12 23:05:10,141 | INFO     | **************************************
[2026-02-12 18:05:43] 2026-02-12 23:05:10,141 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 18:05:43] 2026-02-12 23:05:10,141 | INFO     | **************************************
[2026-02-12 18:05:43] 2026-02-12 23:05:10,141 | INFO     | 
[2026-02-12 18:05:43] 2026-02-12 23:05:10,142 | INFO     | architecture information:
[2026-02-12 18:05:43] 2026-02-12 23:05:10,142 | INFO     | executing command: cat /etc/os-release
[2026-02-12 18:05:43] 2026-02-12 23:05:10,157 | INFO     | cat /etc/os-release:
[2026-02-12 18:05:43] NAME="CentOS Linux"
[2026-02-12 18:05:43] VERSION="7 (Core)"
[2026-02-12 18:05:43] ID="centos"
[2026-02-12 18:05:43] ID_LIKE="rhel fedora"
[2026-02-12 18:05:43] VERSION_ID="7"
[2026-02-12 18:05:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 18:05:43] ANSI_COLOR="0;31"
[2026-02-12 18:05:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 18:05:43] HOME_URL="https://www.centos.org/"
[2026-02-12 18:05:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 18:05:43] 
[2026-02-12 18:05:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 18:05:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 18:05:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 18:05:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 18:05:43] 
[2026-02-12 18:05:43] 2026-02-12 23:05:10,157 | INFO     | **************************************
[2026-02-12 18:05:43] 2026-02-12 23:05:10,503 | WARNING  | process 14360 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 18:05:43] 2026-02-12 23:05:10,583 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,584 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,584 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-12 18:05:43] 2026-02-12 23:05:10,584 | WARNING  | maxPSS not found in memory monitor output
[2026-02-12 18:05:43] 2026-02-12 23:05:10,585 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7014038390/payload.stdout) since it has not been created yet
[2026-02-12 18:05:43] 2026-02-12 23:05:10,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-12 18:05:43] 2026-02-12 23:05:10,601 | INFO     | sufficient remaining disk space (27370979328 B)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,601 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-12 18:05:43] 2026-02-12 23:05:10,601 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7014038390/HITS.48431096._041079.pool.root.1 since it does not exist
[2026-02-12 18:05:43] 2026-02-12 23:05:10,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-12 18:05:43] 2026-02-12 23:05:10,678 | INFO     | sufficient remaining disk space (27370979328 B)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 18:05:43] 2026-02-12 23:05:10,678 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 18:05:43] 2026-02-12 23:05:10,679 | INFO     | update_server=False
[2026-02-12 18:05:43] 2026-02-12 23:05:10,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 18:05:43] 2026-02-12 23:05:10,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:05:43] 2026-02-12 23:05:10,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 18:05:43] 2026-02-12 23:05:10,706 | INFO     | number of running child processes to parent process 14360: 1
[2026-02-12 18:05:43] 2026-02-12 23:05:10,707 | INFO     | maximum number of monitored processes: 6
[2026-02-12 18:05:43] 2026-02-12 23:05:10,707 | INFO     | aborting job monitoring since job object (job id=7014038390) has expired
[2026-02-12 18:05:43] 2026-02-12 23:05:10,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:05:43] 2026-02-12 23:05:10,707 | INFO     | will abort loop
[2026-02-12 18:05:43] 2026-02-12 23:05:10,893 | INFO     | all data control threads have been joined
[2026-02-12 18:05:43] 2026-02-12 23:05:11,251 | INFO     | all job control threads have been joined
[2026-02-12 18:05:43] 2026-02-12 23:05:11,350 | INFO     | all payload control threads have been joined
[2026-02-12 18:05:43] 2026-02-12 23:05:11,680 | INFO     | [job] retrieve thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:11,685 | INFO     | [job] queue monitor thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:11,712 | INFO     | [job] job monitor thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:11,826 | INFO     | [data] copytool_in thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:11,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 18:05:43] 2026-02-12 23:05:11,898 | INFO     | [data] control thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,257 | INFO     | [job] control thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,277 | INFO     | [payload] failed_post thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,349 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,355 | INFO     | [payload] control thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,557 | INFO     | [job] validate thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,722 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,819 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:12,859 | INFO     | [payload] validate_post thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:13,888 | INFO     | [data] copytool_out thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:14,686 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 18:05:43] 2026-02-12 23:05:16,849 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-12 18:05:43] 2026-02-12 23:05:33,604 | INFO     | [monitor] cgroup control has ended
[2026-02-12 18:05:43] 2026-02-12 23:05:35,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181180372800)>', '<ExcThread(monitor, started 140180065343232)>']
[2026-02-12 18:05:43] 2026-02-12 23:05:40,560 | INFO     | all workflow threads have been joined
[2026-02-12 18:05:43] 2026-02-12 23:05:41,048 | INFO     | PID=9966 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-12 18:05:43] 2026-02-12 23:05:42,921 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 18:05:43] 2026-02-12 23:05:42,922 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 18:05:43] 2026-02-12 23:05:42,922 | INFO     | traces error code: 0
[2026-02-12 18:05:43] 2026-02-12 23:05:42,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 18:05:43] 2026-02-12 23:05:42,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 18:05:43] 2026-02-12 23:05:42,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 18:05:43] 2026-02-12 23:05:42,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 18:05:43] 2026-02-12 23:05:42,924 | INFO     | [monitor] control thread has ended
[2026-02-12 18:05:43] 2026-02-12 23:05:43,006 [wrapper] ==== pilot stdout END ====
[2026-02-12 18:05:43] 2026-02-12 23:05:43,010 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 18:05:43] 2026-02-12 23:05:43,013 [wrapper] pilotpid: 9966
[2026-02-12 18:05:43] 2026-02-12 23:05:43,016 [wrapper] Pilot exit status: 0
[2026-02-12 18:05:43] 2026-02-12 23:05:43,030 [wrapper] pandaids: 7014038390
[2026-02-12 18:05:43] 2026-02-12 23:05:43,069 [wrapper] cleanup supervisor_pilot 11462 9967
[2026-02-12 18:05:43] 2026-02-12 23:05:43,073 [wrapper] Test setup, not cleaning
[2026-02-12 18:05:43] 2026-02-12 23:05:43,077 [wrapper] apfmon messages muted
[2026-02-12 18:05:43] 2026-02-12 23:05:43,081 [wrapper] ==== wrapper stdout END ====
[2026-02-12 18:05:43] 2026-02-12 23:05:43,084 [wrapper] ==== wrapper stderr END ====
[2026-02-12 18:05:43]  *** Error codes and diagnostics ***
[2026-02-12 18:05:43]     "exeErrorCode": 0,
[2026-02-12 18:05:43]     "exeErrorDiag": "",
[2026-02-12 18:05:43]     "pilotErrorCode": 0,
[2026-02-12 18:05:43]     "pilotErrorDiag": "",
[2026-02-12 18:05:43]  *** Listing of results directory ***
[2026-02-12 18:05:43] total 940320
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas    584627 Feb 12 11:21 pilot3.tar.gz
[2026-02-12 18:05:43] -rwx------ 1 boincer umatlas     36322 Feb 12 11:21 runpilot2-wrapper.sh
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas      5111 Feb 12 11:22 queuedata.json
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas       100 Feb 12 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 18:05:43] -rwxr-xr-x 1 boincer umatlas      7986 Feb 12 16:19 run_atlas
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas       105 Feb 12 16:19 job.xml
[2026-02-12 18:05:43] -rw-r--r-- 2 boincer umatlas 682062566 Feb 12 16:20 EVNT.48431094._000776.pool.root.1
[2026-02-12 18:05:43] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 16:20 start_atlas.sh
[2026-02-12 18:05:43] drwxrwx--x 2 boincer umatlas      4096 Feb 12 16:20 shared
[2026-02-12 18:05:43] -rw-r--r-- 2 boincer umatlas    597957 Feb 12 16:20 input.tar.gz
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas         0 Feb 12 16:20 boinc_lockfile
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas      2555 Feb 12 16:20 pandaJob.out
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas        57 Feb 12 16:20 setup.sh.local
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas   1000246 Feb 12 16:20 agis_schedconf.cvmfs.json
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas   1512955 Feb 12 16:20 agis_ddmendpoints.agis.ALL.json
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas       445 Feb 12 16:20 workernode_map.json
[2026-02-12 18:05:43] drwx------ 5 boincer umatlas      4096 Feb 12 16:20 pilot3
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas      5952 Feb 12 18:02 init_data.xml
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas       530 Feb 12 18:04 boinc_task_state.xml
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas 274302602 Feb 12 18:04 HITS.48431096._041079.pool.root.1
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas        95 Feb 12 18:04 pilot_heartbeat.json
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas      1052 Feb 12 18:05 memory_monitor_summary.json
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas    397437 Feb 12 18:05 log.48431096._041079.job.log.tgz.1
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas      6425 Feb 12 18:05 heartbeat.json
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas      8192 Feb 12 18:05 boinc_mmap_file
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas        27 Feb 12 18:05 wrapper_checkpoint.txt
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas       162 Feb 12 18:05 pilotlog.txt
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas    896227 Feb 12 18:05 log.48431096._041079.job.log.1
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas       357 Feb 12 18:05 output.list
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas       620 Feb 12 18:05 runtime_log
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas   1310720 Feb 12 18:05 result.tar.gz
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas      9343 Feb 12 18:05 runtime_log.err
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas       660 Feb 12 18:05 HSANDm4coA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmVmKDmIYXnSo.diag
[2026-02-12 18:05:43] -rw-r--r-- 1 boincer umatlas     21391 Feb 12 18:05 stderr.txt
[2026-02-12 18:05:43] HITS file was successfully produced:
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas 274302602 Feb 12 18:04 shared/HITS.pool.root.1
[2026-02-12 18:05:43]  *** Contents of shared directory: ***
[2026-02-12 18:05:43] total 935844
[2026-02-12 18:05:43] -rw-r--r-- 2 boincer umatlas 682062566 Feb 12 16:20 ATLAS.root_0
[2026-02-12 18:05:43] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 16:20 start_atlas.sh
[2026-02-12 18:05:43] -rw-r--r-- 2 boincer umatlas    597957 Feb 12 16:20 input.tar.gz
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas 274302602 Feb 12 18:04 HITS.pool.root.1
[2026-02-12 18:05:43] -rw------- 1 boincer umatlas   1310720 Feb 12 18:05 result.tar.gz
18:05:44 (5112): run_atlas exited; CPU time 68344.142672
18:05:44 (5112): called boinc_finish(0)

</stderr_txt>
]]>

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