Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:49 (25774): wrapper (7.7.26015): starting
14:29:49 (25774): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 14:29:49] Arguments: --nthreads 8
[2026-02-12 14:29:49] Threads: 8
[2026-02-12 14:29:49] Checking for CVMFS
[2026-02-12 14:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 14:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 14:29:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 14:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 14:29:49] 2.11.2.0 2843 180376 100192 156169 0 51 14626526 20275200 1 130560 0 48387718 99.831 12867207 31561 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 14:29:49] CVMFS is ok
[2026-02-12 14:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 14:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 14:29:49] Further information can be found at the LHC@home message board.
[2026-02-12 14:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 14:29:49] Checking for apptainer binary...
[2026-02-12 14:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 14:29:49] Running /usr/bin/apptainer --version
[2026-02-12 14:29:49] apptainer version 1.3.2-1.el7
[2026-02-12 14:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 14:29:51] c-204-34.aglt2.org
[2026-02-12 14:29:51] apptainer works
[2026-02-12 14:29:51] Set ATHENA_PROC_NUMBER=8
[2026-02-12 14:29:51] Set ATHENA_CORE_NUMBER=8
[2026-02-12 14:29:51] Starting ATLAS job with PandaID=7013812771
[2026-02-12 14:29:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:13:10 (9337): wrapper (7.7.26015): starting
16:13:10 (9337): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 16:13:10] Arguments: --nthreads 8
[2026-02-12 16:13:10] Threads: 8
[2026-02-12 16:13:10] This job has been restarted, cleaning up previous attempt
[2026-02-12 16:13:10] Checking for CVMFS
[2026-02-12 16:13:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 16:13:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 16:13:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 16:13:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 16:13:11] 2.11.2.0 6077 8 27396 156170 3 1 14798947 20275201 1 130560 0 22 100.000 1 100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 16:13:11] CVMFS is ok
[2026-02-12 16:13:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 16:13:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 16:13:11] Further information can be found at the LHC@home message board.
[2026-02-12 16:13:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 16:13:11] Checking for apptainer binary...
[2026-02-12 16:13:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 16:13:11] Running /usr/bin/apptainer --version
[2026-02-12 16:13:11] apptainer version 1.3.2-1.el7
[2026-02-12 16:13:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 16:13:13] c-204-34.aglt2.org
[2026-02-12 16:13:13] apptainer works
[2026-02-12 16:13:13] Set ATHENA_PROC_NUMBER=8
[2026-02-12 16:13:13] Set ATHENA_CORE_NUMBER=8
[2026-02-12 16:13:13] Starting ATLAS job with PandaID=7013812771
[2026-02-12 16:13:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 19:24:55]  *** The last 200 lines of the pilot log: ***
[2026-02-12 19:24:55] 2026-02-13 00:23:54,691 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,692 | INFO     | log transfer has been attempted: DONE
[2026-02-12 19:24:55] 2026-02-13 00:23:54,692 | INFO     | time since job start (11423s) is within the limit (349056.0s)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,692 | INFO     | job 7013812771 has finished - writing final server update
[2026-02-12 19:24:55] 2026-02-13 00:23:54,693 | INFO     | total number of processed events: 400 (read)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7013812771/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,696 | INFO     | extracted standard info from prmon json
[2026-02-12 19:24:55] 2026-02-13 00:23:54,696 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 19:24:55] 2026-02-13 00:23:54,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 19:24:55] 2026-02-13 00:23:54,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 19:24:55] 2026-02-13 00:23:54,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 19:24:55] 2026-02-13 00:23:54,701 | INFO     | fitting pss+swap vs Time
[2026-02-12 19:24:55] 2026-02-13 00:23:54,701 | INFO     | sum of square deviations: 2027639878.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,702 | INFO     | sum of deviations: 29095127788.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,703 | INFO     | mean x: 1770936511.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,703 | INFO     | mean y: 2549937.064171123
[2026-02-12 19:24:55] 2026-02-13 00:23:54,703 | INFO     | intersect: -25409075002.371876
[2026-02-12 19:24:55] 2026-02-13 00:23:54,703 | INFO     | chi2: 1.5134115424607666
[2026-02-12 19:24:55] 2026-02-13 00:23:54,704 | INFO     | sum of square deviations: 1869302025.5
[2026-02-12 19:24:55] 2026-02-13 00:23:54,705 | INFO     | sum of deviations: 28379029695.000004
[2026-02-12 19:24:55] 2026-02-13 00:23:54,705 | INFO     | mean x: 1770936358.5
[2026-02-12 19:24:55] 2026-02-13 00:23:54,705 | INFO     | mean y: 2549247.340659341
[2026-02-12 19:24:55] 2026-02-13 00:23:54,705 | INFO     | intersect: -26883130444.994682
[2026-02-12 19:24:55] 2026-02-13 00:23:54,706 | INFO     | chi2: 1.5141049362192207
[2026-02-12 19:24:55] 2026-02-13 00:23:54,706 | INFO     | current chi2=1.5141049362192207 (change=-0.04581660301907568 %)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,706 | INFO     | right removable region: 181
[2026-02-12 19:24:55] 2026-02-13 00:23:54,706 | INFO     | sum of square deviations: 1869302025.5
[2026-02-12 19:24:55] 2026-02-13 00:23:54,707 | INFO     | sum of deviations: -429650632.99999976
[2026-02-12 19:24:55] 2026-02-13 00:23:54,708 | INFO     | mean x: 1770936663.5
[2026-02-12 19:24:55] 2026-02-13 00:23:54,708 | INFO     | mean y: 2578064.285714286
[2026-02-12 19:24:55] 2026-02-13 00:23:54,708 | INFO     | intersect: 409619862.8266224
[2026-02-12 19:24:55] 2026-02-13 00:23:54,708 | INFO     | chi2: 0.1124104026675438
[2026-02-12 19:24:55] 2026-02-13 00:23:54,708 | INFO     | current chi2=0.1124104026675438 (change=92.57238368324008 %)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,709 | INFO     | sum of square deviations: 1719429448.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,710 | INFO     | sum of deviations: -9558458501.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,710 | INFO     | mean x: 1770936816.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,710 | INFO     | mean y: 2587324.463276836
[2026-02-12 19:24:55] 2026-02-13 00:23:54,710 | INFO     | intersect: 9847379783.565718
[2026-02-12 19:24:55] 2026-02-13 00:23:54,711 | INFO     | chi2: 0.013984645166260887
[2026-02-12 19:24:55] 2026-02-13 00:23:54,711 | INFO     | current chi2=0.013984645166260887 (change=87.55929626226785 %)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,711 | INFO     | sum of square deviations: 1577789583.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,712 | INFO     | sum of deviations: -10056934641.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,712 | INFO     | mean x: 1770936968.5
[2026-02-12 19:24:55] 2026-02-13 00:23:54,712 | INFO     | mean y: 2587851.069767442
[2026-02-12 19:24:55] 2026-02-13 00:23:54,712 | INFO     | intersect: 11290656638.84245
[2026-02-12 19:24:55] 2026-02-13 00:23:54,713 | INFO     | chi2: 0.011744904985710621
[2026-02-12 19:24:55] 2026-02-13 00:23:54,713 | INFO     | current chi2=0.011744904985710621 (change=16.015709758255607 %)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,713 | INFO     | left removable region: 30
[2026-02-12 19:24:55] 2026-02-13 00:23:54,713 | INFO     | sum of square deviations: 1067554900.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,714 | INFO     | sum of deviations: -7212825439.999999
[2026-02-12 19:24:55] 2026-02-13 00:23:54,714 | INFO     | mean x: 1770937243.0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,714 | INFO     | mean y: 2585067.973509934
[2026-02-12 19:24:55] 2026-02-13 00:23:54,714 | INFO     | intersect: 11967741332.024998
[2026-02-12 19:24:55] 2026-02-13 00:23:54,715 | INFO     | chi2: 0.010758997197065006
[2026-02-12 19:24:55] 2026-02-13 00:23:54,715 | INFO     | current memory leak: -6.76 B/s (using 151 data points, chi2=0.01)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,715 | INFO     | could have reported an average CPU frequency of 1729 MHz (10 samples)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,715 | INFO     | ..............................
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . Timing measurements:
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . get job = 0 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . initial setup = 1 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . payload setup = 8 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . stage-in = 0 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . payload execution = 11395 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . stage-out = 2 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | . log creation = 0 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,716 | INFO     | ..............................
[2026-02-12 19:24:55] 2026-02-13 00:23:54,799 | INFO     | 
[2026-02-12 19:24:55] 2026-02-13 00:23:54,800 | INFO     | job summary report
[2026-02-12 19:24:55] 2026-02-13 00:23:54,800 | INFO     | --------------------------------------------------
[2026-02-12 19:24:55] 2026-02-13 00:23:54,800 | INFO     | PanDA job id: 7013812771
[2026-02-12 19:24:55] 2026-02-13 00:23:54,800 | INFO     | task id: 48431096
[2026-02-12 19:24:55] 2026-02-13 00:23:54,800 | INFO     | errors: (none)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | pilot state: finished 
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | transexitcode: 0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | exeerrorcode: 0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | exeerrordiag: 
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | exitcode: 0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,801 | INFO     | exitmsg: OK
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | cpuconsumptiontime: 85122 s
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | nevents: 400
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | neventsw: 0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | pid: 15871
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | pgrp: 15871
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | corecount: 8
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | event service: False
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | sizes: {0: 2282009, 1: 2282243, 11: 2282243, 11407: 2311567, 11408: 2311566, 11410: 2320620, 11412: 2320998}
[2026-02-12 19:24:55] 2026-02-13 00:23:54,802 | INFO     | --------------------------------------------------
[2026-02-12 19:24:55] 2026-02-13 00:23:54,803 | INFO     | 
[2026-02-12 19:24:55] 2026-02-13 00:23:54,803 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-12 19:24:55] 2026-02-13 00:23:54,830 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,830 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,834 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 19:24:55] 2026-02-13 00:23:54,834 | INFO     | job 7013812771 has completed (purged errors)
[2026-02-12 19:24:55] 2026-02-13 00:23:54,834 | INFO     | overall cleanup function is called
[2026-02-12 19:24:55] 2026-02-13 00:23:55,843 | INFO     | --- collectZombieJob: --- 10, [15871]
[2026-02-12 19:24:55] 2026-02-13 00:23:55,843 | INFO     | zombie collector waiting for pid 15871
[2026-02-12 19:24:55] 2026-02-13 00:23:55,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 19:24:55] 2026-02-13 00:23:55,843 | INFO     | collected zombie processes
[2026-02-12 19:24:55] 2026-02-13 00:23:55,843 | INFO     | will attempt to kill all subprocesses of pid=15871
[2026-02-12 19:24:55] 2026-02-13 00:23:55,933 | INFO     | process IDs to be killed: [15871] (in reverse order)
[2026-02-12 19:24:55] 2026-02-13 00:23:55,995 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 19:24:55] 2026-02-13 00:23:55,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 19:24:55] 2026-02-13 00:23:56,000 | INFO     | did not find any defunct processes belonging to 15871
[2026-02-12 19:24:55] 2026-02-13 00:23:56,004 | INFO     | did not find any defunct processes belonging to 15871
[2026-02-12 19:24:55] 2026-02-13 00:23:56,004 | INFO     | ready for new job
[2026-02-12 19:24:55] 2026-02-13 00:23:56,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 19:24:55] 2026-02-13 00:23:56,006 | INFO     | **************************************
[2026-02-12 19:24:55] 2026-02-13 00:23:56,006 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 19:24:55] 2026-02-13 00:23:56,006 | INFO     | **************************************
[2026-02-12 19:24:55] 2026-02-13 00:23:56,006 | INFO     | 
[2026-02-12 19:24:55] 2026-02-13 00:23:56,007 | INFO     | architecture information:
[2026-02-12 19:24:55] 2026-02-13 00:23:56,007 | INFO     | executing command: cat /etc/os-release
[2026-02-12 19:24:55] 2026-02-13 00:23:56,027 | INFO     | cat /etc/os-release:
[2026-02-12 19:24:55] NAME="CentOS Linux"
[2026-02-12 19:24:55] VERSION="7 (Core)"
[2026-02-12 19:24:55] ID="centos"
[2026-02-12 19:24:55] ID_LIKE="rhel fedora"
[2026-02-12 19:24:55] VERSION_ID="7"
[2026-02-12 19:24:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 19:24:55] ANSI_COLOR="0;31"
[2026-02-12 19:24:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 19:24:55] HOME_URL="https://www.centos.org/"
[2026-02-12 19:24:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 19:24:55] 
[2026-02-12 19:24:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 19:24:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 19:24:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 19:24:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 19:24:55] 
[2026-02-12 19:24:55] 2026-02-13 00:23:56,027 | INFO     | **************************************
[2026-02-12 19:24:55] 2026-02-13 00:23:56,531 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-12 19:24:55] 2026-02-13 00:23:56,553 | INFO     | sufficient remaining disk space (16613638144 B)
[2026-02-12 19:24:55] 2026-02-13 00:23:56,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 19:24:55] 2026-02-13 00:23:56,554 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 19:24:55] 2026-02-13 00:23:56,554 | INFO     | update_server=False
[2026-02-12 19:24:55] 2026-02-13 00:23:56,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 19:24:55] 2026-02-13 00:23:56,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 19:24:55] 2026-02-13 00:23:56,556 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-12 19:24:55] 2026-02-13 00:23:56,556 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 19:24:55] 2026-02-13 00:23:56,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 19:24:55] 2026-02-13 00:23:56,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 19:24:55] 2026-02-13 00:23:56,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 19:24:55] 2026-02-13 00:23:56,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 19:24:55] 2026-02-13 00:23:56,841 | INFO     | all job control threads have been joined
[2026-02-12 19:24:55] 2026-02-13 00:23:57,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 19:24:55] 2026-02-13 00:23:57,147 | INFO     | aborting loop
[2026-02-12 19:24:55] 2026-02-13 00:23:57,357 | INFO     | all payload control threads have been joined
[2026-02-12 19:24:55] 2026-02-13 00:23:57,538 | INFO     | all data control threads have been joined
[2026-02-12 19:24:55] 2026-02-13 00:23:57,560 | INFO     | [job] retrieve thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:57,561 | INFO     | [job] queue monitor thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:57,744 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:57,752 | INFO     | [data] copytool_in thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:57,846 | INFO     | [job] control thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,096 | INFO     | [payload] validate_post thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,153 | INFO     | [job] job monitor thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,196 | INFO     | [job] validate thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,259 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,363 | INFO     | [payload] control thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,418 | INFO     | [payload] failed_post thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,466 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,543 | INFO     | [data] control thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,563 | INFO     | [data] copytool_out thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:23:58,896 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:24:00,563 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 19:24:55] 2026-02-13 00:24:49,975 | INFO     | [monitor] cgroup control has ended
[2026-02-12 19:24:55] 2026-02-13 00:24:50,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571844192064)>', '<ExcThread(monitor, started 140570580215552)>']
[2026-02-12 19:24:55] 2026-02-13 00:24:50,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 19:24:55] 2026-02-13 00:24:50,834 | INFO     | [monitor] control thread has ended
[2026-02-12 19:24:55] 2026-02-13 00:24:55,595 | INFO     | all workflow threads have been joined
[2026-02-12 19:24:55] 2026-02-13 00:24:55,595 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 19:24:55] 2026-02-13 00:24:55,596 | INFO     | traces error code: 0
[2026-02-12 19:24:55] 2026-02-13 00:24:55,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 19:24:55] 2026-02-13 00:24:55,707 [wrapper] ==== pilot stdout END ====
[2026-02-12 19:24:55] 2026-02-13 00:24:55,712 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 19:24:55] 2026-02-13 00:24:55,716 [wrapper] pilotpid: 13419
[2026-02-12 19:24:55] 2026-02-13 00:24:55,721 [wrapper] Pilot exit status: 0
[2026-02-12 19:24:55] 2026-02-13 00:24:55,741 [wrapper] pandaids: 7013812771 7013812771
[2026-02-12 19:24:55] 2026-02-13 00:24:55,792 [wrapper] cleanup supervisor_pilot 15918 13420
[2026-02-12 19:24:55] 2026-02-13 00:24:55,797 [wrapper] Test setup, not cleaning
[2026-02-12 19:24:55] 2026-02-13 00:24:55,801 [wrapper] apfmon messages muted
[2026-02-12 19:24:55] 2026-02-13 00:24:55,806 [wrapper] ==== wrapper stdout END ====
[2026-02-12 19:24:55] 2026-02-13 00:24:55,810 [wrapper] ==== wrapper stderr END ====
[2026-02-12 19:24:55]  *** Error codes and diagnostics ***
[2026-02-12 19:24:55]     "exeErrorCode": 0,
[2026-02-12 19:24:55]     "exeErrorDiag": "",
[2026-02-12 19:24:55]     "pilotErrorCode": 0,
[2026-02-12 19:24:55]     "pilotErrorDiag": "",
[2026-02-12 19:24:55]  *** Listing of results directory ***
[2026-02-12 19:24:55] total 1604648
[2026-02-12 19:24:55] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas    584627 Feb 12 09:30 pilot3.tar.gz
[2026-02-12 19:24:55] -rwx------ 1 boincer umatlas     36322 Feb 12 09:34 runpilot2-wrapper.sh
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas      5111 Feb 12 09:36 queuedata.json
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas       100 Feb 12 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 19:24:55] -rwxr-xr-x 1 boincer umatlas      7986 Feb 12 14:29 run_atlas
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas       105 Feb 12 14:29 job.xml
[2026-02-12 19:24:55] -rw-r--r-- 3 boincer umatlas 674908133 Feb 12 14:29 EVNT.48431094._000255.pool.root.1
[2026-02-12 19:24:55] -rw-r--r-- 3 boincer umatlas 674908133 Feb 12 14:29 ATLAS.root_0
[2026-02-12 19:24:55] drwxrwx--x 2 boincer umatlas      4096 Feb 12 14:29 shared
[2026-02-12 19:24:55] -rw-r--r-- 2 boincer umatlas    597964 Feb 12 14:29 input.tar.gz
[2026-02-12 19:24:55] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 14:29 start_atlas.sh
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas         0 Feb 12 14:29 boinc_lockfile
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas      2556 Feb 12 16:13 pandaJob.out
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas        57 Feb 12 16:13 setup.sh.local
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas   1000246 Feb 12 16:13 agis_schedconf.cvmfs.json
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas       433 Feb 12 16:13 workernode_map.json
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas      5911 Feb 12 19:19 init_data.xml
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas 285336280 Feb 12 19:23 HITS.48431096._039472.pool.root.1
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas       532 Feb 12 19:23 boinc_task_state.xml
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas        96 Feb 12 19:23 pilot_heartbeat.json
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas      1050 Feb 12 19:23 memory_monitor_summary.json
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas   1512955 Feb 12 19:23 agis_ddmendpoints.agis.ALL.json
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas    440905 Feb 12 19:23 log.48431096._039472.job.log.tgz.1
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas      6410 Feb 12 19:23 heartbeat.json
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas      8192 Feb 12 19:24 boinc_mmap_file
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas        29 Feb 12 19:24 wrapper_checkpoint.txt
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas      4548 Feb 12 19:24 pilotlog.txt
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas   1592448 Feb 12 19:24 log.48431096._039472.job.log.1
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas       357 Feb 12 19:24 output.list
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas       620 Feb 12 19:24 runtime_log
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas   2048000 Feb 12 19:24 result.tar.gz
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas       788 Feb 12 19:24 yjVKDmvwmA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrRlKDmzeiMMo.diag
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas      9427 Feb 12 19:24 runtime_log.err
[2026-02-12 19:24:55] -rw-r--r-- 1 boincer umatlas     23121 Feb 12 19:24 stderr.txt
[2026-02-12 19:24:55] HITS file was successfully produced:
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas 285336280 Feb 12 19:23 shared/HITS.pool.root.1
[2026-02-12 19:24:55]  *** Contents of shared directory: ***
[2026-02-12 19:24:55] total 940352
[2026-02-12 19:24:55] -rw-r--r-- 3 boincer umatlas 674908133 Feb 12 14:29 ATLAS.root_0
[2026-02-12 19:24:55] -rw-r--r-- 2 boincer umatlas    597964 Feb 12 14:29 input.tar.gz
[2026-02-12 19:24:55] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 14:29 start_atlas.sh
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas 285336280 Feb 12 19:23 HITS.pool.root.1
[2026-02-12 19:24:55] -rw------- 1 boincer umatlas   2048000 Feb 12 19:24 result.tar.gz
19:24:57 (9337): run_atlas exited; CPU time 85057.782820
19:24:57 (9337): called boinc_finish(0)

</stderr_txt>
]]>

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