Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:22:58 (2978358): wrapper (7.7.26015): starting
11:22:58 (2978358): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 11:22:58] Arguments: --nthreads 8
[2026-02-12 11:22:58] Threads: 8
[2026-02-12 11:22:58] Checking for CVMFS
[2026-02-12 11:22:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 11:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 11:22:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 11:22:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 11:22:59] 2.13.0.0 1931894 810 55816 156169 2 126 5013584 6144000 8298 130560 0 2478723 99.997 37343 1302 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-12 11:22:59] CVMFS is ok
[2026-02-12 11:22:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 11:22:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-12 11:22:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-12 11:22:59] Further information can be found at the LHC@home message board.
[2026-02-12 11:22:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 11:22:59] Checking for apptainer binary...
[2026-02-12 11:22:59] apptainer is not installed, using version from CVMFS
[2026-02-12 11:22:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 11:23:00] mz32
[2026-02-12 11:23:00] apptainer works
[2026-02-12 11:23:00] Set ATHENA_PROC_NUMBER=8
[2026-02-12 11:23:00] Set ATHENA_CORE_NUMBER=8
[2026-02-12 11:23:00] Starting ATLAS job with PandaID=7013907392
[2026-02-12 11:23:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/59 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 14:07:07]  *** The last 200 lines of the pilot log: ***
[2026-02-12 14:07:07] 2026-02-12 22:06:33,990 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 14:07:07] 2026-02-12 22:06:33,993 | INFO     | fitting pss+swap vs Time
[2026-02-12 14:07:07] 2026-02-12 22:06:33,993 | INFO     | sum of square deviations: 1270051720.0
[2026-02-12 14:07:07] 2026-02-12 22:06:33,994 | INFO     | sum of deviations: 14557556761.499987
[2026-02-12 14:07:07] 2026-02-12 22:06:33,995 | INFO     | mean x: 1770929082.5
[2026-02-12 14:07:07] 2026-02-12 22:06:33,995 | INFO     | mean y: 2569128.06875
[2026-02-12 14:07:07] 2026-02-12 22:06:33,995 | INFO     | intersect: -20296132281.5753
[2026-02-12 14:07:07] 2026-02-12 22:06:33,995 | INFO     | chi2: 1.5617374319212751
[2026-02-12 14:07:07] 2026-02-12 22:06:33,995 | INFO     | sum of square deviations: 1154663510.0
[2026-02-12 14:07:07] 2026-02-12 22:06:33,996 | INFO     | sum of deviations: 14300469424.999998
[2026-02-12 14:07:07] 2026-02-12 22:06:33,997 | INFO     | mean x: 1770928930.0
[2026-02-12 14:07:07] 2026-02-12 22:06:33,997 | INFO     | mean y: 2568788.438709677
[2026-02-12 14:07:07] 2026-02-12 22:06:33,997 | INFO     | intersect: -21930327503.843845
[2026-02-12 14:07:07] 2026-02-12 22:06:33,997 | INFO     | chi2: 1.5633138289837016
[2026-02-12 14:07:07] 2026-02-12 22:06:33,997 | INFO     | current chi2=1.5633138289837016 (change=-0.10093867446637338 %)
[2026-02-12 14:07:07] 2026-02-12 22:06:33,997 | INFO     | right removable region: 154
[2026-02-12 14:07:07] 2026-02-12 22:06:33,998 | INFO     | sum of square deviations: 1154663510.0
[2026-02-12 14:07:07] 2026-02-12 22:06:33,999 | INFO     | sum of deviations: -11313306074.0
[2026-02-12 14:07:07] 2026-02-12 22:06:33,999 | INFO     | mean x: 1770929235.0
[2026-02-12 14:07:07] 2026-02-12 22:06:33,999 | INFO     | mean y: 2602855.870967742
[2026-02-12 14:07:07] 2026-02-12 22:06:33,999 | INFO     | intersect: 17354034071.48951
[2026-02-12 14:07:07] 2026-02-12 22:06:33,999 | INFO     | chi2: 0.05802148767708127
[2026-02-12 14:07:07] 2026-02-12 22:06:33,999 | INFO     | current chi2=0.05802148767708127 (change=96.28481161486266 %)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,000 | INFO     | sum of square deviations: 1046484737.5
[2026-02-12 14:07:07] 2026-02-12 22:06:34,001 | INFO     | sum of deviations: -14183629933.5
[2026-02-12 14:07:07] 2026-02-12 22:06:34,001 | INFO     | mean x: 1770929387.5
[2026-02-12 14:07:07] 2026-02-12 22:06:34,001 | INFO     | mean y: 2606828.06
[2026-02-12 14:07:07] 2026-02-12 22:06:34,001 | INFO     | intersect: 24005065889.876774
[2026-02-12 14:07:07] 2026-02-12 22:06:34,001 | INFO     | chi2: 0.02139593101315309
[2026-02-12 14:07:07] 2026-02-12 22:06:34,001 | INFO     | current chi2=0.02139593101315309 (change=63.12412544085013 %)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,002 | INFO     | sum of square deviations: 945282840.0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | sum of deviations: -13449177336.999998
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | mean x: 1770929540.0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | mean y: 2605711.0965517242
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | intersect: 25198816228.14331
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | chi2: 0.02056890564429092
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | current chi2=0.02056890564429092 (change=3.8653394813890407 %)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,003 | INFO     | left removable region: 30
[2026-02-12 14:07:07] 2026-02-12 22:06:34,004 | INFO     | sum of square deviations: 591173875.0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,004 | INFO     | sum of deviations: -8074640790.5
[2026-02-12 14:07:07] 2026-02-12 22:06:34,005 | INFO     | mean x: 1770929814.5
[2026-02-12 14:07:07] 2026-02-12 22:06:34,005 | INFO     | mean y: 2597925.9758064514
[2026-02-12 14:07:07] 2026-02-12 22:06:34,005 | INFO     | intersect: 24191119648.58119
[2026-02-12 14:07:07] 2026-02-12 22:06:34,005 | INFO     | chi2: 0.01839769760564156
[2026-02-12 14:07:07] 2026-02-12 22:06:34,005 | INFO     | current memory leak: -13.66 B/s (using 124 data points, chi2=0.02)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | could have reported an average CPU frequency of 1984 MHz (9 samples)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | ..............................
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . Timing measurements:
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . get job = 0 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . initial setup = 9 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . payload setup = 8 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . stage-in = 0 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . payload execution = 9761 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,006 | INFO     | . stage-out = 1 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,007 | INFO     | . log creation = 0 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,007 | INFO     | ..............................
[2026-02-12 14:07:07] 2026-02-12 22:06:34,107 | INFO     | 
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | job summary report
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | --------------------------------------------------
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | PanDA job id: 7013907392
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | task id: 48431096
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | errors: (none)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | pilot state: finished 
[2026-02-12 14:07:07] 2026-02-12 22:06:34,108 | INFO     | transexitcode: 0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | exeerrorcode: 0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | exeerrordiag: 
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | exitcode: 0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | exitmsg: OK
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | cpuconsumptiontime: 74439 s
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | nevents: 400
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | neventsw: 0
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | pid: 2987832
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | pgrp: 2987832
[2026-02-12 14:07:07] 2026-02-12 22:06:34,109 | INFO     | corecount: 8
[2026-02-12 14:07:07] 2026-02-12 22:06:34,110 | INFO     | event service: False
[2026-02-12 14:07:07] 2026-02-12 22:06:34,110 | INFO     | sizes: {0: 2281788, 1: 2282249, 12: 2282249, 9773: 2310888, 9775: 2319958, 9776: 2320160}
[2026-02-12 14:07:07] 2026-02-12 22:06:34,110 | INFO     | --------------------------------------------------
[2026-02-12 14:07:07] 2026-02-12 22:06:34,110 | INFO     | 
[2026-02-12 14:07:07] 2026-02-12 22:06:34,110 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/59
[2026-02-12 14:07:07] 2026-02-12 22:06:34,144 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,144 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,144 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,144 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 14:07:07] 2026-02-12 22:06:34,146 | INFO     | job 7013907392 has completed (purged errors)
[2026-02-12 14:07:07] 2026-02-12 22:06:34,147 | INFO     | overall cleanup function is called
[2026-02-12 14:07:07] 2026-02-12 22:06:34,950 | WARNING  | process 2987832 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 14:07:07] 2026-02-12 22:06:35,156 | INFO     | --- collectZombieJob: --- 10, [2987832]
[2026-02-12 14:07:07] 2026-02-12 22:06:35,157 | INFO     | zombie collector waiting for pid 2987832
[2026-02-12 14:07:07] 2026-02-12 22:06:35,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 14:07:07] 2026-02-12 22:06:35,157 | INFO     | collected zombie processes
[2026-02-12 14:07:07] 2026-02-12 22:06:35,157 | INFO     | will attempt to kill all subprocesses of pid=2987832
[2026-02-12 14:07:07] 2026-02-12 22:06:35,700 | INFO     | using path: /var/lib/boinc-client/slots/59/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 14:07:07] 2026-02-12 22:06:35,702 | INFO     | using path: /var/lib/boinc-client/slots/59/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 14:07:07] 2026-02-12 22:06:35,703 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-12 14:07:07] 2026-02-12 22:06:35,703 | WARNING  | maxPSS not found in memory monitor output
[2026-02-12 14:07:07] 2026-02-12 22:06:36,496 | INFO     | process IDs to be killed: [2987832] (in reverse order)
[2026-02-12 14:07:07] 2026-02-12 22:06:36,704 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 14:07:07] 2026-02-12 22:06:36,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 14:07:07] 2026-02-12 22:06:36,740 | INFO     | did not find any defunct processes belonging to 2987832
[2026-02-12 14:07:07] 2026-02-12 22:06:36,774 | INFO     | did not find any defunct processes belonging to 2987832
[2026-02-12 14:07:07] 2026-02-12 22:06:36,774 | INFO     | ready for new job
[2026-02-12 14:07:07] 2026-02-12 22:06:36,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 14:07:07] 2026-02-12 22:06:36,778 | INFO     | **************************************
[2026-02-12 14:07:07] 2026-02-12 22:06:36,778 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 14:07:07] 2026-02-12 22:06:36,778 | INFO     | **************************************
[2026-02-12 14:07:07] 2026-02-12 22:06:36,778 | INFO     | 
[2026-02-12 14:07:07] 2026-02-12 22:06:36,790 | INFO     | architecture information:
[2026-02-12 14:07:07] 2026-02-12 22:06:36,790 | INFO     | executing command: cat /etc/os-release
[2026-02-12 14:07:07] 2026-02-12 22:06:36,807 | INFO     | number of running child processes to parent process 2987832: 1
[2026-02-12 14:07:07] 2026-02-12 22:06:36,808 | INFO     | maximum number of monitored processes: 6
[2026-02-12 14:07:07] 2026-02-12 22:06:36,809 | INFO     | aborting job monitoring since job object (job id=7013907392) has expired
[2026-02-12 14:07:07] 2026-02-12 22:06:36,816 | INFO     | cat /etc/os-release:
[2026-02-12 14:07:07] NAME="CentOS Linux"
[2026-02-12 14:07:07] VERSION="7 (Core)"
[2026-02-12 14:07:07] ID="centos"
[2026-02-12 14:07:07] ID_LIKE="rhel fedora"
[2026-02-12 14:07:07] VERSION_ID="7"
[2026-02-12 14:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 14:07:07] ANSI_COLOR="0;31"
[2026-02-12 14:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 14:07:07] HOME_URL="https://www.centos.org/"
[2026-02-12 14:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 14:07:07] 
[2026-02-12 14:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 14:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 14:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 14:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 14:07:07] 
[2026-02-12 14:07:07] 2026-02-12 22:06:36,816 | INFO     | **************************************
[2026-02-12 14:07:07] 2026-02-12 22:06:37,319 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/59
[2026-02-12 14:07:07] 2026-02-12 22:06:37,347 | INFO     | sufficient remaining disk space (350195023872 B)
[2026-02-12 14:07:07] 2026-02-12 22:06:37,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 14:07:07] 2026-02-12 22:06:37,347 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 14:07:07] 2026-02-12 22:06:37,348 | INFO     | update_server=False
[2026-02-12 14:07:07] 2026-02-12 22:06:37,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 14:07:07] 2026-02-12 22:06:37,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 14:07:07] 2026-02-12 22:06:37,348 | INFO     | will abort loop
[2026-02-12 14:07:07] 2026-02-12 22:06:37,589 | INFO     | all data control threads have been joined
[2026-02-12 14:07:07] 2026-02-12 22:06:38,352 | INFO     | [job] retrieve thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:38,354 | INFO     | [job] job monitor thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:38,354 | INFO     | [payload] failed_post thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:38,411 | INFO     | all payload control threads have been joined
[2026-02-12 14:07:07] 2026-02-12 22:06:38,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 14:07:07] 2026-02-12 22:06:38,594 | INFO     | [data] control thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:38,729 | INFO     | all job control threads have been joined
[2026-02-12 14:07:07] 2026-02-12 22:06:38,777 | INFO     | [job] validate thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:38,813 | INFO     | [payload] validate_post thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:38,921 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:39,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 14:07:07] 2026-02-12 22:06:39,408 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:39,416 | INFO     | [payload] control thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:39,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 14:07:07] 2026-02-12 22:06:39,734 | INFO     | [job] control thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:39,774 | INFO     | [data] copytool_in thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:39,775 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:40,121 | INFO     | [job] queue monitor thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:40,537 | INFO     | [data] copytool_out thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:41,602 | INFO     | [monitor] cgroup control has ended
[2026-02-12 14:07:07] 2026-02-12 22:06:43,471 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:47,537 | INFO     | job.realtimelogging is not enabled
[2026-02-12 14:07:07] 2026-02-12 22:06:48,542 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 14:07:07] 2026-02-12 22:06:48,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139497623328576)>', '<ExcThread(monitor, started 139497090041600)>']
[2026-02-12 14:07:07] 2026-02-12 22:06:53,963 | INFO     | all workflow threads have been joined
[2026-02-12 14:07:07] 2026-02-12 22:06:53,963 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 14:07:07] 2026-02-12 22:06:53,964 | INFO     | traces error code: 0
[2026-02-12 14:07:07] 2026-02-12 22:06:53,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 14:07:07] 2026-02-12 22:07:06,680 | INFO     | PID=2982759 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-12 14:07:07] 2026-02-12 22:07:06,680 | INFO     | .. there are 10 such processes running
[2026-02-12 14:07:07] 2026-02-12 22:07:06,680 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 14:07:07] 2026-02-12 22:07:06,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 14:07:07] 2026-02-12 22:07:06,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 14:07:07] 2026-02-12 22:07:06,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 14:07:07] 2026-02-12 22:07:06,681 | INFO     | [monitor] control thread has ended
[2026-02-12 14:07:07] 2026-02-12 22:07:06,828 [wrapper] ==== pilot stdout END ====
[2026-02-12 14:07:07] 2026-02-12 22:07:06,832 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 14:07:07] 2026-02-12 22:07:06,835 [wrapper] pilotpid: 2982759
[2026-02-12 14:07:07] 2026-02-12 22:07:06,839 [wrapper] Pilot exit status: 0
[2026-02-12 14:07:07] 2026-02-12 22:07:06,852 [wrapper] pandaids: 7013907392
[2026-02-12 14:07:07] 2026-02-12 22:07:06,977 [wrapper] cleanup supervisor_pilot 3128947 2982760
[2026-02-12 14:07:07] 2026-02-12 22:07:06,982 [wrapper] Test setup, not cleaning
[2026-02-12 14:07:07] 2026-02-12 22:07:06,985 [wrapper] apfmon messages muted
[2026-02-12 14:07:07] 2026-02-12 22:07:06,990 [wrapper] ==== wrapper stdout END ====
[2026-02-12 14:07:07] 2026-02-12 22:07:06,993 [wrapper] ==== wrapper stderr END ====
[2026-02-12 14:07:07]  *** Error codes and diagnostics ***
[2026-02-12 14:07:07]     "exeErrorCode": 0,
[2026-02-12 14:07:07]     "exeErrorDiag": "",
[2026-02-12 14:07:07]     "pilotErrorCode": 0,
[2026-02-12 14:07:07]     "pilotErrorDiag": "",
[2026-02-12 14:07:07]  *** Listing of results directory ***
[2026-02-12 14:07:07] total 950756
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc    584627 Feb 12 06:30 pilot3.tar.gz
[2026-02-12 14:07:07] -rwx------ 1 boinc boinc     36322 Feb 12 06:31 runpilot2-wrapper.sh
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc      5111 Feb 12 06:32 queuedata.json
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc       100 Feb 12 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 14:07:07] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 11:22 run_atlas
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc       105 Feb 12 11:22 job.xml
[2026-02-12 14:07:07] -rw-r--r-- 2 boinc boinc 679134568 Feb 12 11:22 EVNT.48431094._000260.pool.root.1
[2026-02-12 14:07:07] drwxrwx--x 2 boinc boinc      4096 Feb 12 11:22 shared
[2026-02-12 14:07:07] -rw-r--r-- 2 boinc boinc    597963 Feb 12 11:22 input.tar.gz
[2026-02-12 14:07:07] -rw-r--r-- 2 boinc boinc     15845 Feb 12 11:22 start_atlas.sh
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc         0 Feb 12 11:22 boinc_setup_complete
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc      9891 Feb 12 11:22 init_data.xml
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc         0 Feb 12 11:22 boinc_lockfile
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc      2555 Feb 12 11:23 pandaJob.out
[2026-02-12 14:07:07] -rw------- 1 boinc boinc   1000246 Feb 12 11:23 agis_schedconf.cvmfs.json
[2026-02-12 14:07:07] -rw------- 1 boinc boinc   1512955 Feb 12 11:23 agis_ddmendpoints.agis.ALL.json
[2026-02-12 14:07:07] -rw------- 1 boinc boinc       416 Feb 12 11:23 workernode_map.json
[2026-02-12 14:07:07] drwx------ 5 boinc boinc      4096 Feb 12 11:23 pilot3
[2026-02-12 14:07:07] -rw------- 1 boinc boinc 286951878 Feb 12 14:05 HITS.48431096._039694.pool.root.1
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc       530 Feb 12 14:05 boinc_task_state.xml
[2026-02-12 14:07:07] -rw------- 1 boinc boinc      1023 Feb 12 14:06 memory_monitor_summary.json
[2026-02-12 14:07:07] -rw------- 1 boinc boinc        95 Feb 12 14:06 pilot_heartbeat.json
[2026-02-12 14:07:07] -rw------- 1 boinc boinc    401279 Feb 12 14:06 log.48431096._039694.job.log.tgz.1
[2026-02-12 14:07:07] -rw------- 1 boinc boinc      6263 Feb 12 14:06 heartbeat.json
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc        27 Feb 12 14:06 wrapper_checkpoint.txt
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc      8192 Feb 12 14:06 boinc_mmap_file
[2026-02-12 14:07:07] -rw------- 1 boinc boinc       824 Feb 12 14:07 pilotlog.txt
[2026-02-12 14:07:07] -rw------- 1 boinc boinc   1378042 Feb 12 14:07 log.48431096._039694.job.log.1
[2026-02-12 14:07:07] -rw------- 1 boinc boinc       357 Feb 12 14:07 output.list
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc       620 Feb 12 14:07 runtime_log
[2026-02-12 14:07:07] -rw------- 1 boinc boinc   1792000 Feb 12 14:07 result.tar.gz
[2026-02-12 14:07:07] -rw------- 1 boinc boinc       649 Feb 12 14:07 wb2KDmkumA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJMlKDm6Tkebm.diag
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc      8913 Feb 12 14:07 runtime_log.err
[2026-02-12 14:07:07] -rw-r--r-- 1 boinc boinc     21242 Feb 12 14:07 stderr.txt
[2026-02-12 14:07:07] HITS file was successfully produced:
[2026-02-12 14:07:07] -rw------- 1 boinc boinc 286951878 Feb 12 14:05 shared/HITS.pool.root.1
[2026-02-12 14:07:07]  *** Contents of shared directory: ***
[2026-02-12 14:07:07] total 945808
[2026-02-12 14:07:07] -rw-r--r-- 2 boinc boinc 679134568 Feb 12 11:22 ATLAS.root_0
[2026-02-12 14:07:07] -rw-r--r-- 2 boinc boinc    597963 Feb 12 11:22 input.tar.gz
[2026-02-12 14:07:07] -rw-r--r-- 2 boinc boinc     15845 Feb 12 11:22 start_atlas.sh
[2026-02-12 14:07:07] -rw------- 1 boinc boinc 286951878 Feb 12 14:05 HITS.pool.root.1
[2026-02-12 14:07:07] -rw------- 1 boinc boinc   1792000 Feb 12 14:07 result.tar.gz
14:07:08 (2978358): run_atlas exited; CPU time 75022.770482
14:07:08 (2978358): called boinc_finish(0)

</stderr_txt>
]]>

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