Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:01 (28146): wrapper (7.7.26015): starting
14:29:01 (28146): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 14:29:01] Arguments: --nthreads 8
[2026-02-12 14:29:01] Threads: 8
[2026-02-12 14:29:01] Checking for CVMFS
[2026-02-12 14:29:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 14:29:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 14:29:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 14:29:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 14:29:02] 2.11.2.0 14221 230408 157008 156169 1 188 16826982 18432001 1833 130560 0 154420987 99.982 8578679 29955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 14:29:02] CVMFS is ok
[2026-02-12 14:29:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 14:29:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 14:29:02] Further information can be found at the LHC@home message board.
[2026-02-12 14:29:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 14:29:02] Checking for apptainer binary...
[2026-02-12 14:29:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 14:29:02] Running /usr/bin/apptainer --version
[2026-02-12 14:29:02] apptainer version 1.3.2-1.el7
[2026-02-12 14:29:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 14:29:03] c-206-9.aglt2.org
[2026-02-12 14:29:03] apptainer works
[2026-02-12 14:29:03] Set ATHENA_PROC_NUMBER=8
[2026-02-12 14:29:03] Set ATHENA_CORE_NUMBER=8
[2026-02-12 14:29:03] Starting ATLAS job with PandaID=7013680875
[2026-02-12 14:29:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 18:56:49]  *** The last 200 lines of the pilot log: ***
[2026-02-12 18:56:49] 2026-02-12 23:55:49,299 | INFO     | extracted standard info from prmon json
[2026-02-12 18:56:49] 2026-02-12 23:55:49,299 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 18:56:49] 2026-02-12 23:55:49,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 18:56:49] 2026-02-12 23:55:49,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 18:56:49] 2026-02-12 23:55:49,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 18:56:49] 2026-02-12 23:55:49,303 | INFO     | fitting pss+swap vs Time
[2026-02-12 18:56:49] 2026-02-12 23:55:49,304 | INFO     | sum of square deviations: 5576683165.5
[2026-02-12 18:56:49] 2026-02-12 23:55:49,305 | INFO     | sum of deviations: 35336200353.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,305 | INFO     | mean x: 1770932528.5
[2026-02-12 18:56:49] 2026-02-12 23:55:49,306 | INFO     | mean y: 2543840.900763359
[2026-02-12 18:56:49] 2026-02-12 23:55:49,306 | INFO     | intersect: -11218826421.956945
[2026-02-12 18:56:49] 2026-02-12 23:55:49,306 | INFO     | chi2: 1.5789244524953532
[2026-02-12 18:56:49] 2026-02-12 23:55:49,306 | INFO     | sum of square deviations: 5263458688.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,308 | INFO     | sum of deviations: 33854469910.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,308 | INFO     | mean x: 1770932376.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,308 | INFO     | mean y: 2543119.3968871594
[2026-02-12 18:56:49] 2026-02-12 23:55:49,308 | INFO     | intersect: -11388061498.175976
[2026-02-12 18:56:49] 2026-02-12 23:55:49,309 | INFO     | chi2: 1.5793752059536064
[2026-02-12 18:56:49] 2026-02-12 23:55:49,309 | INFO     | current chi2=1.5793752059536064 (change=-0.028548133353740065 %)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,309 | INFO     | right removable region: 256
[2026-02-12 18:56:49] 2026-02-12 23:55:49,309 | INFO     | sum of square deviations: 5263458688.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,311 | INFO     | sum of deviations: -8984916675.999996
[2026-02-12 18:56:49] 2026-02-12 23:55:49,311 | INFO     | mean x: 1770932681.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,311 | INFO     | mean y: 2565263.054474708
[2026-02-12 18:56:49] 2026-02-12 23:55:49,312 | INFO     | intersect: 3025612183.488532
[2026-02-12 18:56:49] 2026-02-12 23:55:49,312 | INFO     | chi2: 0.08850543687374345
[2026-02-12 18:56:49] 2026-02-12 23:55:49,312 | INFO     | current chi2=0.08850543687374345 (change=94.3945743107678 %)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,312 | INFO     | sum of square deviations: 4962187923.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,314 | INFO     | sum of deviations: -16839313611.500011
[2026-02-12 18:56:49] 2026-02-12 23:55:49,314 | INFO     | mean x: 1770932833.5
[2026-02-12 18:56:49] 2026-02-12 23:55:49,315 | INFO     | mean y: 2569210.757936508
[2026-02-12 18:56:49] 2026-02-12 23:55:49,315 | INFO     | intersect: 6012275781.922963
[2026-02-12 18:56:49] 2026-02-12 23:55:49,315 | INFO     | chi2: 0.03483086514250128
[2026-02-12 18:56:49] 2026-02-12 23:55:49,315 | INFO     | current chi2=0.03483086514250128 (change=60.6455079226501 %)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,315 | INFO     | sum of square deviations: 4672638308.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,317 | INFO     | sum of deviations: -15925854502.000002
[2026-02-12 18:56:49] 2026-02-12 23:55:49,317 | INFO     | mean x: 1770932986.0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,317 | INFO     | mean y: 2568726.882591093
[2026-02-12 18:56:49] 2026-02-12 23:55:49,318 | INFO     | intersect: 6038478037.376651
[2026-02-12 18:56:49] 2026-02-12 23:55:49,318 | INFO     | chi2: 0.034700699583958716
[2026-02-12 18:56:49] 2026-02-12 23:55:49,318 | INFO     | current chi2=0.034700699583958716 (change=0.37370750915896855 %)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,318 | INFO     | left removable region: 30
[2026-02-12 18:56:49] 2026-02-12 23:55:49,318 | INFO     | sum of square deviations: 3579276412.5
[2026-02-12 18:56:49] 2026-02-12 23:55:49,320 | INFO     | sum of deviations: -8518596472.5
[2026-02-12 18:56:49] 2026-02-12 23:55:49,320 | INFO     | mean x: 1770933260.5
[2026-02-12 18:56:49] 2026-02-12 23:55:49,320 | INFO     | mean y: 2563671.9867256638
[2026-02-12 18:56:49] 2026-02-12 23:55:49,320 | INFO     | intersect: 4217344562.683924
[2026-02-12 18:56:49] 2026-02-12 23:55:49,320 | INFO     | chi2: 0.027011085020207607
[2026-02-12 18:56:49] 2026-02-12 23:55:49,321 | INFO     | current memory leak: -2.38 B/s (using 226 data points, chi2=0.03)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,321 | INFO     | could have reported an average CPU frequency of 2439 MHz (12 samples)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,321 | INFO     | ..............................
[2026-02-12 18:56:49] 2026-02-12 23:55:49,321 | INFO     | . Timing measurements:
[2026-02-12 18:56:49] 2026-02-12 23:55:49,321 | INFO     | . get job = 0 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,321 | INFO     | . initial setup = 5 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,322 | INFO     | . payload setup = 5 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,322 | INFO     | . stage-in = 0 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,322 | INFO     | . payload execution = 15978 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,322 | INFO     | . stage-out = 2 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,322 | INFO     | . log creation = 0 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,322 | INFO     | ..............................
[2026-02-12 18:56:49] 2026-02-12 23:55:49,398 | INFO     | 
[2026-02-12 18:56:49] 2026-02-12 23:55:49,398 | INFO     | job summary report
[2026-02-12 18:56:49] 2026-02-12 23:55:49,398 | INFO     | --------------------------------------------------
[2026-02-12 18:56:49] 2026-02-12 23:55:49,398 | INFO     | PanDA job id: 7013680875
[2026-02-12 18:56:49] 2026-02-12 23:55:49,398 | INFO     | task id: 48431096
[2026-02-12 18:56:49] 2026-02-12 23:55:49,399 | INFO     | errors: (none)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,399 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 18:56:49] 2026-02-12 23:55:49,399 | INFO     | pilot state: finished 
[2026-02-12 18:56:49] 2026-02-12 23:55:49,399 | INFO     | transexitcode: 0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,399 | INFO     | exeerrorcode: 0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,399 | INFO     | exeerrordiag: 
[2026-02-12 18:56:49] 2026-02-12 23:55:49,400 | INFO     | exitcode: 0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,400 | INFO     | exitmsg: OK
[2026-02-12 18:56:49] 2026-02-12 23:55:49,400 | INFO     | cpuconsumptiontime: 122934 s
[2026-02-12 18:56:49] 2026-02-12 23:55:49,400 | INFO     | nevents: 400
[2026-02-12 18:56:49] 2026-02-12 23:55:49,400 | INFO     | neventsw: 0
[2026-02-12 18:56:49] 2026-02-12 23:55:49,400 | INFO     | pid: 3978
[2026-02-12 18:56:49] 2026-02-12 23:55:49,401 | INFO     | pgrp: 3978
[2026-02-12 18:56:49] 2026-02-12 23:55:49,401 | INFO     | corecount: 8
[2026-02-12 18:56:49] 2026-02-12 23:55:49,401 | INFO     | event service: False
[2026-02-12 18:56:49] 2026-02-12 23:55:49,401 | INFO     | sizes: {0: 2281782, 1: 2282243, 15988: 2313624, 15990: 2322678, 15991: 2322816}
[2026-02-12 18:56:49] 2026-02-12 23:55:49,401 | INFO     | --------------------------------------------------
[2026-02-12 18:56:49] 2026-02-12 23:55:49,401 | INFO     | 
[2026-02-12 18:56:49] 2026-02-12 23:55:49,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-12 18:56:49] 2026-02-12 23:55:49,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,426 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,426 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 18:56:49] 2026-02-12 23:55:49,429 | INFO     | job 7013680875 has completed (purged errors)
[2026-02-12 18:56:49] 2026-02-12 23:55:49,429 | INFO     | overall cleanup function is called
[2026-02-12 18:56:49] 2026-02-12 23:55:49,852 | INFO     | PID=31825 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 18:56:49] 2026-02-12 23:55:50,017 | WARNING  | process 3978 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 18:56:49] 2026-02-12 23:55:50,096 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 18:56:49] 2026-02-12 23:55:50,193 | INFO     | number of running child processes to parent process 3978: 1
[2026-02-12 18:56:49] 2026-02-12 23:55:50,193 | INFO     | maximum number of monitored processes: 6
[2026-02-12 18:56:49] 2026-02-12 23:55:50,193 | INFO     | aborting job monitoring since job object (job id=7013680875) has expired
[2026-02-12 18:56:49] 2026-02-12 23:55:50,436 | INFO     | --- collectZombieJob: --- 10, [3978]
[2026-02-12 18:56:49] 2026-02-12 23:55:50,436 | INFO     | zombie collector waiting for pid 3978
[2026-02-12 18:56:49] 2026-02-12 23:55:50,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 18:56:49] 2026-02-12 23:55:50,437 | INFO     | collected zombie processes
[2026-02-12 18:56:49] 2026-02-12 23:55:50,437 | INFO     | will attempt to kill all subprocesses of pid=3978
[2026-02-12 18:56:49] 2026-02-12 23:55:50,533 | INFO     | process IDs to be killed: [3978] (in reverse order)
[2026-02-12 18:56:49] 2026-02-12 23:55:50,588 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 18:56:49] 2026-02-12 23:55:50,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 18:56:49] 2026-02-12 23:55:50,591 | INFO     | did not find any defunct processes belonging to 3978
[2026-02-12 18:56:49] 2026-02-12 23:55:50,594 | INFO     | did not find any defunct processes belonging to 3978
[2026-02-12 18:56:49] 2026-02-12 23:55:50,594 | INFO     | ready for new job
[2026-02-12 18:56:49] 2026-02-12 23:55:50,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 18:56:49] 2026-02-12 23:55:50,596 | INFO     | **************************************
[2026-02-12 18:56:49] 2026-02-12 23:55:50,596 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 18:56:49] 2026-02-12 23:55:50,596 | INFO     | **************************************
[2026-02-12 18:56:49] 2026-02-12 23:55:50,596 | INFO     | 
[2026-02-12 18:56:49] 2026-02-12 23:55:50,597 | INFO     | architecture information:
[2026-02-12 18:56:49] 2026-02-12 23:55:50,598 | INFO     | executing command: cat /etc/os-release
[2026-02-12 18:56:49] 2026-02-12 23:55:50,613 | INFO     | cat /etc/os-release:
[2026-02-12 18:56:49] NAME="CentOS Linux"
[2026-02-12 18:56:49] VERSION="7 (Core)"
[2026-02-12 18:56:49] ID="centos"
[2026-02-12 18:56:49] ID_LIKE="rhel fedora"
[2026-02-12 18:56:49] VERSION_ID="7"
[2026-02-12 18:56:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 18:56:49] ANSI_COLOR="0;31"
[2026-02-12 18:56:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 18:56:49] HOME_URL="https://www.centos.org/"
[2026-02-12 18:56:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 18:56:49] 
[2026-02-12 18:56:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 18:56:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 18:56:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 18:56:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 18:56:49] 
[2026-02-12 18:56:49] 2026-02-12 23:55:50,614 | INFO     | **************************************
[2026-02-12 18:56:49] 2026-02-12 23:55:51,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-12 18:56:49] 2026-02-12 23:55:51,133 | INFO     | sufficient remaining disk space (23810015232 B)
[2026-02-12 18:56:49] 2026-02-12 23:55:51,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 18:56:49] 2026-02-12 23:55:51,134 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 18:56:49] 2026-02-12 23:55:51,134 | INFO     | update_server=False
[2026-02-12 18:56:49] 2026-02-12 23:55:51,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 18:56:49] 2026-02-12 23:55:51,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:56:49] 2026-02-12 23:55:51,135 | INFO     | will abort loop
[2026-02-12 18:56:49] 2026-02-12 23:55:51,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 18:56:49] 2026-02-12 23:55:51,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:56:49] 2026-02-12 23:55:51,816 | INFO     | all data control threads have been joined
[2026-02-12 18:56:49] 2026-02-12 23:55:52,124 | INFO     | all payload control threads have been joined
[2026-02-12 18:56:49] 2026-02-12 23:55:52,140 | INFO     | [job] retrieve thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,140 | INFO     | [job] job monitor thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,141 | INFO     | [job] queue monitor thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 18:56:49] 2026-02-12 23:55:52,225 | INFO     | [payload] failed_post thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,705 | INFO     | all job control threads have been joined
[2026-02-12 18:56:49] 2026-02-12 23:55:52,765 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,778 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,822 | INFO     | [data] control thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:52,830 | INFO     | [payload] validate_post thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:53,110 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:53,130 | INFO     | [payload] control thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:53,238 | INFO     | [data] copytool_in thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:53,267 | INFO     | [job] validate thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:53,532 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:53,710 | INFO     | [job] control thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:54,222 | INFO     | [data] copytool_out thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:55:55,141 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 18:56:49] 2026-02-12 23:56:22,053 | INFO     | PID=31825 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 18:56:49] 2026-02-12 23:56:22,054 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 18:56:49] 2026-02-12 23:56:22,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 18:56:49] 2026-02-12 23:56:22,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 18:56:49] 2026-02-12 23:56:43,908 | INFO     | [monitor] cgroup control has ended
[2026-02-12 18:56:49] 2026-02-12 23:56:44,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844679227200)>', '<ExcThread(monitor, started 139844235802368)>']
[2026-02-12 18:56:49] 2026-02-12 23:56:45,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 18:56:49] 2026-02-12 23:56:45,169 | INFO     | [monitor] control thread has ended
[2026-02-12 18:56:49] 2026-02-12 23:56:49,614 | INFO     | all workflow threads have been joined
[2026-02-12 18:56:49] 2026-02-12 23:56:49,614 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 18:56:49] 2026-02-12 23:56:49,615 | INFO     | traces error code: 0
[2026-02-12 18:56:49] 2026-02-12 23:56:49,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 18:56:49] 2026-02-12 23:56:49,702 [wrapper] ==== pilot stdout END ====
[2026-02-12 18:56:49] 2026-02-12 23:56:49,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 18:56:49] 2026-02-12 23:56:49,710 [wrapper] pilotpid: 31825
[2026-02-12 18:56:49] 2026-02-12 23:56:49,713 [wrapper] Pilot exit status: 0
[2026-02-12 18:56:49] 2026-02-12 23:56:49,728 [wrapper] pandaids: 7013680875
[2026-02-12 18:56:49] 2026-02-12 23:56:49,775 [wrapper] cleanup supervisor_pilot  8036 31826
[2026-02-12 18:56:49] 2026-02-12 23:56:49,779 [wrapper] Test setup, not cleaning
[2026-02-12 18:56:49] 2026-02-12 23:56:49,782 [wrapper] apfmon messages muted
[2026-02-12 18:56:49] 2026-02-12 23:56:49,786 [wrapper] ==== wrapper stdout END ====
[2026-02-12 18:56:49] 2026-02-12 23:56:49,790 [wrapper] ==== wrapper stderr END ====
[2026-02-12 18:56:49]  *** Error codes and diagnostics ***
[2026-02-12 18:56:49]     "exeErrorCode": 0,
[2026-02-12 18:56:49]     "exeErrorDiag": "",
[2026-02-12 18:56:49]     "pilotErrorCode": 0,
[2026-02-12 18:56:49]     "pilotErrorDiag": "",
[2026-02-12 18:56:49]  *** Listing of results directory ***
[2026-02-12 18:56:49] total 938788
[2026-02-12 18:56:49] -rwx------ 1 boincer umatlas     36322 Feb 12 06:43 runpilot2-wrapper.sh
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas      5111 Feb 12 06:46 queuedata.json
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas    584627 Feb 12 06:46 pilot3.tar.gz
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas       100 Feb 12 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 18:56:49] -rwxr-xr-x 1 boincer umatlas      7986 Feb 12 14:28 run_atlas
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas       105 Feb 12 14:28 job.xml
[2026-02-12 18:56:49] -rw-r--r-- 2 boincer umatlas 674110414 Feb 12 14:29 EVNT.48431094._000228.pool.root.1
[2026-02-12 18:56:49] -rw-r--r-- 2 boincer umatlas    597962 Feb 12 14:29 input.tar.gz
[2026-02-12 18:56:49] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 14:29 start_atlas.sh
[2026-02-12 18:56:49] drwxrwx--x 2 boincer umatlas      4096 Feb 12 14:29 shared
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas         0 Feb 12 14:29 boinc_lockfile
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas      2556 Feb 12 14:29 pandaJob.out
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas        57 Feb 12 14:29 setup.sh.local
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas   1000246 Feb 12 14:29 agis_schedconf.cvmfs.json
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas       434 Feb 12 14:29 workernode_map.json
[2026-02-12 18:56:49] drwx------ 5 boincer umatlas      4096 Feb 12 14:29 pilot3
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas      5951 Feb 12 18:49 init_data.xml
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas 277797421 Feb 12 18:55 HITS.48431096._038135.pool.root.1
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas       532 Feb 12 18:55 boinc_task_state.xml
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas      1077 Feb 12 18:55 memory_monitor_summary.json
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas   1512955 Feb 12 18:55 agis_ddmendpoints.agis.ALL.json
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas    506477 Feb 12 18:55 log.48431096._038135.job.log.tgz.1
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas      6417 Feb 12 18:55 heartbeat.json
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas        95 Feb 12 18:56 pilot_heartbeat.json
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas      8192 Feb 12 18:56 boinc_mmap_file
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas        29 Feb 12 18:56 wrapper_checkpoint.txt
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas      4744 Feb 12 18:56 pilotlog.txt
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas   2232089 Feb 12 18:56 log.48431096._038135.job.log.1
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas       357 Feb 12 18:56 output.list
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas       620 Feb 12 18:56 runtime_log
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas   2754560 Feb 12 18:56 result.tar.gz
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas      9337 Feb 12 18:56 runtime_log.err
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas       661 Feb 12 18:56 1uNMDm1HkA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPElKDmMlh8Oo.diag
[2026-02-12 18:56:49] -rw-r--r-- 1 boincer umatlas     21148 Feb 12 18:56 stderr.txt
[2026-02-12 18:56:49] HITS file was successfully produced:
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas 277797421 Feb 12 18:55 shared/HITS.pool.root.1
[2026-02-12 18:56:49]  *** Contents of shared directory: ***
[2026-02-12 18:56:49] total 932900
[2026-02-12 18:56:49] -rw-r--r-- 2 boincer umatlas 674110414 Feb 12 14:29 ATLAS.root_0
[2026-02-12 18:56:49] -rw-r--r-- 2 boincer umatlas    597962 Feb 12 14:29 input.tar.gz
[2026-02-12 18:56:49] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 14:29 start_atlas.sh
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas 277797421 Feb 12 18:55 HITS.pool.root.1
[2026-02-12 18:56:49] -rw------- 1 boincer umatlas   2754560 Feb 12 18:56 result.tar.gz
18:56:51 (28146): run_atlas exited; CPU time 123119.386795
18:56:51 (28146): called boinc_finish(0)

</stderr_txt>
]]>

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