Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:00:16 (52140): wrapper (7.7.26015): starting
14:00:16 (52140): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 14:00:16] Arguments: --nthreads 12
[2026-02-12 14:00:16] Threads: 12
[2026-02-12 14:00:16] Checking for CVMFS
[2026-02-12 14:00:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 14:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 14:00:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 14:00:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 14:00:17] 2.11.5.0 1719783 140993 244924 156171 1 263 29232226 45568001 17862 130560 0 1188148777 99.797 723428257 25073 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-12 14:00:17] CVMFS is ok
[2026-02-12 14:00:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 14:00:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 14:00:17] Further information can be found at the LHC@home message board.
[2026-02-12 14:00:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 14:00:17] Checking for apptainer binary...
[2026-02-12 14:00:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 14:00:17] Running /usr/bin/apptainer --version
[2026-02-12 14:00:17] apptainer version 1.4.1-1.el9
[2026-02-12 14:00:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 14:00:18] wns0060.triumf.lcg
[2026-02-12 14:00:18] apptainer works
[2026-02-12 14:00:18] Set ATHENA_PROC_NUMBER=12
[2026-02-12 14:00:18] Set ATHENA_CORE_NUMBER=12
[2026-02-12 14:00:18] Starting ATLAS job with PandaID=7009771063
[2026-02-12 14:00:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 14:05:19]  *** The last 200 lines of the pilot log: ***
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | WARNING  | wrong length of table data, x=[1770933731.0], y=[1308.0] (must be same and length>=4)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | could have reported an average CPU frequency of 2624 MHz (4 samples)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | ..............................
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | . Timing measurements:
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | . get job = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . initial setup = 21 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . payload setup = 27 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . stage-in = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . payload execution = 58 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . stage-out = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . log creation = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | ..............................
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7009771063/pilotlog.txt
[2026-02-12 14:05:19] 2026-02-12 22:04:45,779 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-12 14:05:19] - Log from pilotlog.txt -
[2026-02-12 14:05:19] 2026-02-12 22:04:45,764 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7009771063/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | INFO     | extracted standard info from prmon json
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | WARNING  | wrong length of table data, x=[1770933731.0], y=[1308.0] (must be same and length>=4)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | could have reported an average CPU frequency of 2624 MHz (4 samples)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | ..............................
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | . Timing measurements:
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | . get job = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . initial setup = 21 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . payload setup = 27 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . stage-in = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . payload execution = 58 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . stage-out = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . log creation = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | ..............................
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7009771063/pilotlog.txt
[2026-02-12 14:05:19] 2026-02-12 22:04:45,779 | WARNING  | 
[2026-02-12 14:05:19] [begin log extracts]
[2026-02-12 14:05:19] - Log from pilotlog.txt -
[2026-02-12 14:05:19] 2026-02-12 22:04:45,764 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7009771063/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | INFO     | extracted standard info from prmon json
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 14:05:19] 2026-02-12 22:04:45,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | WARNING  | wrong length of table data, x=[1770933731.0], y=[1308.0] (must be same and length>=4)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | could have reported an average CPU frequency of 2624 MHz (4 samples)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | ..............................
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | . Timing measurements:
[2026-02-12 14:05:19] 2026-02-12 22:04:45,766 | INFO     | . get job = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . initial setup = 21 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . payload setup = 27 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . stage-in = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . payload execution = 58 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . stage-out = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | . log creation = 0 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | ..............................
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-12 14:05:19] 2026-02-12 22:04:45,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7009771063/pilotlog.txt
[2026-02-12 14:05:19] [end log extracts]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,779 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,780 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | 
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | job summary report
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | --------------------------------------------------
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | PanDA job id: 7009771063
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | task id: 48318034
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-12 14:02:38,467 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | pilot state: failed 
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | transexitcode: 65
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | exeerrorcode: 65
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | exitcode: 65
[2026-02-12 14:05:19] 2026-02-12 22:04:45,837 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | cpuconsumptiontime: 13 s
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | nevents: 0
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | neventsw: 0
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | pid: 60701
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | pgrp: 60701
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | corecount: 12
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | event service: False
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | sizes: {0: 2281095, 1: 2281777, 2: 2281777, 3: 2282238, 4: 2282238, 90: 2305765, 92: 2310057, 93: 2310085, 208: 2310251}
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | --------------------------------------------------
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | 
[2026-02-12 14:05:19] 2026-02-12 22:04:45,838 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | job 7009771063 has completed (purged errors)
[2026-02-12 14:05:19] 2026-02-12 22:04:45,859 | INFO     | overall cleanup function is called
[2026-02-12 14:05:19] 2026-02-12 22:04:46,865 | INFO     | --- collectZombieJob: --- 10, [60701]
[2026-02-12 14:05:19] 2026-02-12 22:04:46,866 | INFO     | zombie collector waiting for pid 60701
[2026-02-12 14:05:19] 2026-02-12 22:04:46,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 14:05:19] 2026-02-12 22:04:46,866 | INFO     | collected zombie processes
[2026-02-12 14:05:19] 2026-02-12 22:04:46,866 | INFO     | will attempt to kill all subprocesses of pid=60701
[2026-02-12 14:05:19] 2026-02-12 22:04:47,055 | INFO     | process IDs to be killed: [60701] (in reverse order)
[2026-02-12 14:05:19] 2026-02-12 22:04:47,141 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 14:05:19] 2026-02-12 22:04:47,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 14:05:19] 2026-02-12 22:04:47,151 | INFO     | did not find any defunct processes belonging to 60701
[2026-02-12 14:05:19] 2026-02-12 22:04:47,158 | INFO     | did not find any defunct processes belonging to 60701
[2026-02-12 14:05:19] 2026-02-12 22:04:47,159 | INFO     | ready for new job
[2026-02-12 14:05:19] 2026-02-12 22:04:47,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 14:05:19] 2026-02-12 22:04:47,160 | INFO     | **************************************
[2026-02-12 14:05:19] 2026-02-12 22:04:47,160 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 14:05:19] 2026-02-12 22:04:47,160 | INFO     | **************************************
[2026-02-12 14:05:19] 2026-02-12 22:04:47,160 | INFO     | 
[2026-02-12 14:05:19] 2026-02-12 22:04:47,164 | INFO     | architecture information:
[2026-02-12 14:05:19] 2026-02-12 22:04:47,165 | INFO     | executing command: cat /etc/os-release
[2026-02-12 14:05:19] 2026-02-12 22:04:47,175 | INFO     | cat /etc/os-release:
[2026-02-12 14:05:19] NAME="CentOS Linux"
[2026-02-12 14:05:19] VERSION="7 (Core)"
[2026-02-12 14:05:19] ID="centos"
[2026-02-12 14:05:19] ID_LIKE="rhel fedora"
[2026-02-12 14:05:19] VERSION_ID="7"
[2026-02-12 14:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 14:05:19] ANSI_COLOR="0;31"
[2026-02-12 14:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 14:05:19] HOME_URL="https://www.centos.org/"
[2026-02-12 14:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 14:05:19] 
[2026-02-12 14:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 14:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 14:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 14:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 14:05:19] 
[2026-02-12 14:05:19] 2026-02-12 22:04:47,176 | INFO     | **************************************
[2026-02-12 14:05:19] 2026-02-12 22:04:47,679 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-12 14:05:19] 2026-02-12 22:04:47,690 | INFO     | sufficient remaining disk space (2110970134528 B)
[2026-02-12 14:05:19] 2026-02-12 22:04:47,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 14:05:19] 2026-02-12 22:04:47,690 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 14:05:19] 2026-02-12 22:04:47,690 | INFO     | update_server=False
[2026-02-12 14:05:19] 2026-02-12 22:04:47,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 14:05:19] 2026-02-12 22:04:47,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 14:05:19] 2026-02-12 22:04:47,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 14:05:19] 2026-02-12 22:04:47,691 | INFO     | aborting loop
[2026-02-12 14:05:19] 2026-02-12 22:04:48,142 | INFO     | all data control threads have been joined
[2026-02-12 14:05:19] 2026-02-12 22:04:48,367 | INFO     | all job control threads have been joined
[2026-02-12 14:05:19] 2026-02-12 22:04:48,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 14:05:19] 2026-02-12 22:04:48,696 | INFO     | [job] retrieve thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:48,696 | INFO     | [job] queue monitor thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:48,697 | INFO     | [job] job monitor thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:48,717 | INFO     | all payload control threads have been joined
[2026-02-12 14:05:19] 2026-02-12 22:04:48,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:48,936 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,098 | INFO     | [data] copytool_in thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,134 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,147 | INFO     | [data] control thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,183 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 14:05:19] 2026-02-12 22:04:49,293 | INFO     | [payload] validate_post thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,373 | INFO     | [job] control thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,472 | INFO     | [payload] failed_post thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,723 | INFO     | [payload] control thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:49,845 | INFO     | [job] validate thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:50,538 | INFO     | [data] copytool_out thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:04:53,263 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 14:05:19] 2026-02-12 22:05:12,570 | INFO     | [monitor] cgroup control has ended
[2026-02-12 14:05:19] 2026-02-12 22:05:13,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362838103872)>', '<ExcThread(monitor, started 140361468995328)>']
[2026-02-12 14:05:19] 2026-02-12 22:05:17,269 | INFO     | PID=56044 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 14:05:19] 2026-02-12 22:05:17,269 | INFO     | .. there are 28 such processes running
[2026-02-12 14:05:19] 2026-02-12 22:05:17,270 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 14:05:19] 2026-02-12 22:05:17,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 14:05:19] 2026-02-12 22:05:17,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 14:05:19] 2026-02-12 22:05:17,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 14:05:19] 2026-02-12 22:05:17,270 | INFO     | [monitor] control thread has ended
[2026-02-12 14:05:19] 2026-02-12 22:05:18,847 | INFO     | all workflow threads have been joined
[2026-02-12 14:05:19] 2026-02-12 22:05:18,848 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 14:05:19] 2026-02-12 22:05:18,848 | INFO     | traces error code: 0
[2026-02-12 14:05:19] 2026-02-12 22:05:18,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 14:05:19] 2026-02-12 22:05:18,983 [wrapper] ==== pilot stdout END ====
[2026-02-12 14:05:19] 2026-02-12 22:05:18,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 14:05:19] 2026-02-12 22:05:18,986 [wrapper] pilotpid: 56044
[2026-02-12 14:05:19] 2026-02-12 22:05:18,988 [wrapper] Pilot exit status: 0
[2026-02-12 14:05:19] 2026-02-12 22:05:18,995 [wrapper] pandaids: 7009771063
[2026-02-12 14:05:19] 2026-02-12 22:05:19,035 [wrapper] cleanup supervisor_pilot   56050 56045
[2026-02-12 14:05:19] 2026-02-12 22:05:19,037 [wrapper] Test setup, not cleaning
[2026-02-12 14:05:19] 2026-02-12 22:05:19,039 [wrapper] apfmon messages muted
[2026-02-12 14:05:19] 2026-02-12 22:05:19,040 [wrapper] ==== wrapper stdout END ====
[2026-02-12 14:05:19] 2026-02-12 22:05:19,042 [wrapper] ==== wrapper stderr END ====
[2026-02-12 14:05:19]  *** Error codes and diagnostics ***
[2026-02-12 14:05:19]     "exeErrorCode": 65,
[2026-02-12 14:05:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-12 14:05:19]     "pilotErrorCode": 1305,
[2026-02-12 14:05:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-12 14:05:19]  *** Listing of results directory ***
[2026-02-12 14:05:19] total 483624
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc      5111 Feb 12 10:24 queuedata.json
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc    584627 Feb 12 10:24 pilot3.tar.gz
[2026-02-12 14:05:19] -rwx------. 1 boinc boinc     36322 Feb 12 10:24 runpilot2-wrapper.sh
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc       100 Feb 12 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 14:05:19] -rwxr-xr-x. 1 boinc boinc      7986 Feb 12 14:00 run_atlas
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc       105 Feb 12 14:00 job.xml
[2026-02-12 14:05:19] -rw-r--r--. 2 boinc boinc 491087295 Feb 12 14:00 EVNT.48318032._000304.pool.root.1
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc      6594 Feb 12 14:00 init_data.xml
[2026-02-12 14:05:19] -rw-r--r--. 2 boinc boinc     15845 Feb 12 14:00 start_atlas.sh
[2026-02-12 14:05:19] drwxrwx--x. 2 boinc boinc      4096 Feb 12 14:00 shared
[2026-02-12 14:05:19] -rw-r--r--. 2 boinc boinc    597959 Feb 12 14:00 input.tar.gz
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc         0 Feb 12 14:00 boinc_lockfile
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc      2538 Feb 12 14:00 pandaJob.out
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc   1000246 Feb 12 14:00 agis_schedconf.cvmfs.json
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc   1512955 Feb 12 14:00 agis_ddmendpoints.agis.ALL.json
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc       439 Feb 12 14:01 workernode_map.json
[2026-02-12 14:05:19] drwx------. 5 boinc boinc      4096 Feb 12 14:01 pilot3
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc       523 Feb 12 14:02 boinc_task_state.xml
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc       979 Feb 12 14:02 memory_monitor_summary.json
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc     22089 Feb 12 14:02 log.48318034._017280.job.log.tgz.1
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc      7026 Feb 12 14:04 heartbeat.json
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc      8192 Feb 12 14:05 boinc_mmap_file
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc        22 Feb 12 14:05 wrapper_checkpoint.txt
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc        95 Feb 12 14:05 pilot_heartbeat.json
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc      4817 Feb 12 14:05 pilotlog.txt
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc     87301 Feb 12 14:05 log.48318034._017280.job.log.1
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc       188 Feb 12 14:05 output.list
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc       620 Feb 12 14:05 runtime_log
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc    122880 Feb 12 14:05 result.tar.gz
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc      8635 Feb 12 14:05 runtime_log.err
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc       643 Feb 12 14:05 JC8MDmhXqA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQilKDmmrAE3n.diag
[2026-02-12 14:05:19] -rw-r--r--. 1 boinc boinc     21780 Feb 12 14:05 stderr.txt
[2026-02-12 14:05:19] No HITS result produced
[2026-02-12 14:05:19]  *** Contents of shared directory: ***
[2026-02-12 14:05:19] total 480304
[2026-02-12 14:05:19] -rw-r--r--. 2 boinc boinc 491087295 Feb 12 14:00 ATLAS.root_0
[2026-02-12 14:05:19] -rw-r--r--. 2 boinc boinc     15845 Feb 12 14:00 start_atlas.sh
[2026-02-12 14:05:19] -rw-r--r--. 2 boinc boinc    597959 Feb 12 14:00 input.tar.gz
[2026-02-12 14:05:19] -rw-------. 1 boinc boinc    122880 Feb 12 14:05 result.tar.gz
14:05:20 (52140): run_atlas exited; CPU time 21.953117
14:05:20 (52140): called boinc_finish(0)

</stderr_txt>
]]>

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