Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:57:42 (309997): wrapper (7.7.26015): starting
06:57:42 (309997): wrapper: running run_atlas (--nthreads 3)
[2026-02-13 06:57:42] Arguments: --nthreads 3
[2026-02-13 06:57:42] Threads: 3
[2026-02-13 06:57:42] Checking for CVMFS
[2026-02-13 06:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-13 06:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-13 06:57:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-13 06:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-13 06:57:43] 2.9.2.0 3110276 9956 84752 156184 1 50 25268613 36864001 0 130560 0 3982565 99.983 351227 6632 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-13 06:57:43] CVMFS is ok
[2026-02-13 06:57:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-13 06:57:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-13 06:57:43] Further information can be found at the LHC@home message board.
[2026-02-13 06:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-13 06:57:43] Checking for apptainer binary...
[2026-02-13 06:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-13 06:57:43] Running /usr/bin/apptainer --version
[2026-02-13 06:57:43] apptainer version 1.4.1-1.1
[2026-02-13 06:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-13 06:57:43] thA327
[2026-02-13 06:57:43] apptainer works
[2026-02-13 06:57:43] Set ATHENA_PROC_NUMBER=3
[2026-02-13 06:57:43] Set ATHENA_CORE_NUMBER=3
[2026-02-13 06:57:43] Starting ATLAS job with PandaID=7009369597
[2026-02-13 06:57:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-13 08:21:24]  *** The last 200 lines of the pilot log: ***
[2026-02-13 08:21:24] 2026-02-13 07:20:54,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-13 08:21:24] 2026-02-13 07:20:54,415 | INFO     | did not find any defunct processes belonging to 318464
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | did not find any defunct processes belonging to 318464
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | ready for new job
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | **************************************
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | **************************************
[2026-02-13 08:21:24] 2026-02-13 07:20:54,416 | INFO     | 
[2026-02-13 08:21:24] 2026-02-13 07:20:54,417 | INFO     | architecture information:
[2026-02-13 08:21:24] 2026-02-13 07:20:54,417 | INFO     | executing command: cat /etc/os-release
[2026-02-13 08:21:24] 2026-02-13 07:20:54,426 | INFO     | cat /etc/os-release:
[2026-02-13 08:21:24] NAME="CentOS Linux"
[2026-02-13 08:21:24] VERSION="7 (Core)"
[2026-02-13 08:21:24] ID="centos"
[2026-02-13 08:21:24] ID_LIKE="rhel fedora"
[2026-02-13 08:21:24] VERSION_ID="7"
[2026-02-13 08:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-13 08:21:24] ANSI_COLOR="0;31"
[2026-02-13 08:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-13 08:21:24] HOME_URL="https://www.centos.org/"
[2026-02-13 08:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-13 08:21:24] 
[2026-02-13 08:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-13 08:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-13 08:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-13 08:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-13 08:21:24] 
[2026-02-13 08:21:24] 2026-02-13 07:20:54,426 | INFO     | **************************************
[2026-02-13 08:21:24] 2026-02-13 07:20:54,929 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | INFO     | sufficient remaining disk space (373420982272 B)
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | INFO     | current server update state: UPDATING_FINAL
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | INFO     | update_server=False
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-13 08:21:24] 2026-02-13 07:20:54,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-13 08:21:24] 2026-02-13 07:20:55,263 | INFO     | all data control threads have been joined
[2026-02-13 08:21:24] 2026-02-13 07:20:55,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-13 08:21:24] 2026-02-13 07:20:55,629 | INFO     | aborting loop
[2026-02-13 08:21:24] 2026-02-13 07:20:55,946 | INFO     | [job] retrieve thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:55,946 | INFO     | [job] queue monitor thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,075 | INFO     | all payload control threads have been joined
[2026-02-13 08:21:24] 2026-02-13 07:20:56,077 | INFO     | all job control threads have been joined
[2026-02-13 08:21:24] 2026-02-13 07:20:56,269 | INFO     | [data] control thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,317 | INFO     | [payload] validate_post thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,394 | INFO     | [job] validate thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-13 08:21:24] 2026-02-13 07:20:56,530 | INFO     | [job] create_data_payload thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,548 | INFO     | [payload] validate_pre thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,634 | INFO     | [job] job monitor thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,645 | INFO     | [data] copytool_in thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:56,948 | INFO     | [data] copytool_out thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:57,081 | INFO     | [payload] control thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:57,083 | INFO     | [job] control thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:57,312 | INFO     | [payload] failed_post thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:57,395 | INFO     | [payload] execute_payloads thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:20:58,542 | INFO     | [monitor] cgroup control has ended
[2026-02-13 08:21:24] 2026-02-13 07:21:00,443 | INFO     | [data] queue_monitor thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:21:05,483 | INFO     | job.realtimelogging is not enabled
[2026-02-13 08:21:24] 2026-02-13 07:21:06,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-13 08:21:24] 2026-02-13 07:21:07,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554696431424)>', '<ExcThread(monitor, started 140554071435008)>']
[2026-02-13 08:21:24] 2026-02-13 07:21:12,523 | INFO     | all workflow threads have been joined
[2026-02-13 08:21:24] 2026-02-13 07:21:12,523 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-13 08:21:24] 2026-02-13 07:21:12,523 | INFO     | traces error code: 0
[2026-02-13 08:21:24] 2026-02-13 07:21:12,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-13 08:21:24] 2026-02-13 07:21:24,573 | INFO     | PID=314038 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-13 08:21:24] 2026-02-13 07:21:24,573 | INFO     | found 0 job(s) in 20 queues
[2026-02-13 08:21:24] 2026-02-13 07:21:24,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-13 08:21:24] 2026-02-13 07:21:24,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-13 08:21:24] 2026-02-13 07:21:24,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-13 08:21:24] 2026-02-13 07:21:24,573 | INFO     | [monitor] control thread has ended
[2026-02-13 08:21:24] 2026-02-13 07:21:24,618 [wrapper] ==== pilot stdout END ====
[2026-02-13 08:21:24] 2026-02-13 07:21:24,621 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-13 08:21:24] 2026-02-13 07:21:24,623 [wrapper] pilotpid: 314038
[2026-02-13 08:21:24] 2026-02-13 07:21:24,625 [wrapper] Pilot exit status: 0
[2026-02-13 08:21:24] 2026-02-13 07:21:24,633 [wrapper] pandaids: 7009369597
[2026-02-13 08:21:24] 2026-02-13 07:21:24,648 [wrapper] cleanup supervisor_pilot  323594 314039
[2026-02-13 08:21:24] 2026-02-13 07:21:24,650 [wrapper] Test setup, not cleaning
[2026-02-13 08:21:24] 2026-02-13 07:21:24,652 [wrapper] apfmon messages muted
[2026-02-13 08:21:24] 2026-02-13 07:21:24,655 [wrapper] ==== wrapper stdout END ====
[2026-02-13 08:21:24] 2026-02-13 07:21:24,657 [wrapper] ==== wrapper stderr END ====
[2026-02-13 08:21:24]  *** Error codes and diagnostics ***
[2026-02-13 08:21:24]     "exeErrorCode": 0,
[2026-02-13 08:21:24]     "exeErrorDiag": "",
[2026-02-13 08:21:24]     "pilotErrorCode": 0,
[2026-02-13 08:21:24]     "pilotErrorDiag": "",
[2026-02-13 08:21:24]  *** Listing of results directory ***
[2026-02-13 08:21:24] total 716104
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc    584627 Feb 12 10:23 pilot3.tar.gz
[2026-02-13 08:21:24] -rwx------ 1 boinc boinc     36322 Feb 12 10:28 runpilot2-wrapper.sh
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc      5111 Feb 12 10:31 queuedata.json
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc       100 Feb 13 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-13 08:21:24] -rwxr-xr-x 1 boinc boinc      7986 Feb 13 06:57 run_atlas
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc       105 Feb 13 06:57 job.xml
[2026-02-13 08:21:24] -rw-r--r-- 2 boinc boinc 531411977 Feb 13 06:57 EVNT.48466711._000052.pool.root.1
[2026-02-13 08:21:24] -rw-r--r-- 2 boinc boinc    597946 Feb 13 06:57 input.tar.gz
[2026-02-13 08:21:24] -rw-r--r-- 2 boinc boinc     15845 Feb 13 06:57 start_atlas.sh
[2026-02-13 08:21:24] drwxrwx--x 2 boinc boinc      4096 Feb 13 06:57 shared
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc         0 Feb 13 06:57 boinc_setup_complete
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc      6446 Feb 13 06:57 init_data.xml
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc         0 Feb 13 06:57 boinc_lockfile
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc      2497 Feb 13 06:57 pandaJob.out
[2026-02-13 08:21:24] -rw------- 1 boinc boinc   1000262 Feb 13 06:57 agis_schedconf.cvmfs.json
[2026-02-13 08:21:24] -rw------- 1 boinc boinc   1512955 Feb 13 06:57 agis_ddmendpoints.agis.ALL.json
[2026-02-13 08:21:24] -rw------- 1 boinc boinc       415 Feb 13 06:57 workernode_map.json
[2026-02-13 08:21:24] drwx------ 5 boinc boinc      4096 Feb 13 06:57 pilot3
[2026-02-13 08:21:24] -rw------- 1 boinc boinc 195962970 Feb 13 08:20 HITS.48466714._001658.pool.root.1
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc       530 Feb 13 08:20 boinc_task_state.xml
[2026-02-13 08:21:24] -rw------- 1 boinc boinc      1011 Feb 13 08:20 memory_monitor_summary.json
[2026-02-13 08:21:24] -rw------- 1 boinc boinc    268346 Feb 13 08:20 log.48466714._001658.job.log.tgz.1
[2026-02-13 08:21:24] -rw------- 1 boinc boinc      6279 Feb 13 08:20 heartbeat.json
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc      8192 Feb 13 08:21 boinc_mmap_file
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc        27 Feb 13 08:21 wrapper_checkpoint.txt
[2026-02-13 08:21:24] -rw------- 1 boinc boinc       746 Feb 13 08:21 pilotlog.txt
[2026-02-13 08:21:24] -rw------- 1 boinc boinc        95 Feb 13 08:21 pilot_heartbeat.json
[2026-02-13 08:21:24] -rw------- 1 boinc boinc    729449 Feb 13 08:21 log.48466714._001658.job.log.1
[2026-02-13 08:21:24] -rw------- 1 boinc boinc       357 Feb 13 08:21 output.list
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc       620 Feb 13 08:21 runtime_log
[2026-02-13 08:21:24] -rw------- 1 boinc boinc   1013760 Feb 13 08:21 result.tar.gz
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc      8896 Feb 13 08:21 runtime_log.err
[2026-02-13 08:21:24] -rw------- 1 boinc boinc       657 Feb 13 08:21 66UKDm7AiA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmW9kKDmwIhH2m.diag
[2026-02-13 08:21:24] -rw-r--r-- 1 boinc boinc      9946 Feb 13 08:21 stderr.txt
[2026-02-13 08:21:24] HITS file was successfully produced:
[2026-02-13 08:21:24] -rw------- 1 boinc boinc 195962970 Feb 13 08:20 shared/HITS.pool.root.1
[2026-02-13 08:21:24]  *** Contents of shared directory: ***
[2026-02-13 08:21:24] total 711932
[2026-02-13 08:21:24] -rw-r--r-- 2 boinc boinc 531411977 Feb 13 06:57 ATLAS.root_0
[2026-02-13 08:21:24] -rw-r--r-- 2 boinc boinc    597946 Feb 13 06:57 input.tar.gz
[2026-02-13 08:21:24] -rw-r--r-- 2 boinc boinc     15845 Feb 13 06:57 start_atlas.sh
[2026-02-13 08:21:24] -rw------- 1 boinc boinc 195962970 Feb 13 08:20 HITS.pool.root.1
[2026-02-13 08:21:24] -rw------- 1 boinc boinc   1013760 Feb 13 08:21 result.tar.gz
08:21:26 (309997): run_atlas exited; CPU time 14208.315515
08:21:26 (309997): called boinc_finish(0)

</stderr_txt>
]]>

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