Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:34 (2098655): wrapper (7.7.26015): starting
11:56:34 (2098655): wrapper: running run_atlas (--nthreads 9)
[2026-02-12 11:56:34] Arguments: --nthreads 9
[2026-02-12 11:56:34] Threads: 9
[2026-02-12 11:56:34] Checking for CVMFS
[2026-02-12 11:56:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 11:56:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 11:56:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 11:56:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 11:56:35] 2.13.3.0 15397 142499 331528 156162 2 489 21272012 32935937 40310 16776704 0 997913945 99.564 1125128597 36196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-12 11:56:35] CVMFS is ok
[2026-02-12 11:56:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 11:56:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 11:56:35] Further information can be found at the LHC@home message board.
[2026-02-12 11:56:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 11:56:35] Checking for apptainer binary...
[2026-02-12 11:56:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 11:56:35] Running /usr/bin/apptainer --version
[2026-02-12 11:56:35] apptainer version 1.4.5-2.el9
[2026-02-12 11:56:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 11:56:35] c7-16-8.aglt2.org
[2026-02-12 11:56:35] apptainer works
[2026-02-12 11:56:35] Set ATHENA_PROC_NUMBER=9
[2026-02-12 11:56:35] Set ATHENA_CORE_NUMBER=9
[2026-02-12 11:56:35] Starting ATLAS job with PandaID=7013405998
[2026-02-12 11:56:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:20:11 (2098655): BOINC client no longer exists - exiting
20:20:11 (2098655): timer handler: client dead, exiting
20:30:55 (386632): wrapper (7.7.26015): starting
20:30:55 (386632): wrapper: running run_atlas (--nthreads 11)
[2026-02-12 20:30:55] Arguments: --nthreads 11
[2026-02-12 20:30:55] Threads: 11
[2026-02-12 20:30:55] This job has been restarted, cleaning up previous attempt
[2026-02-12 20:30:55] Checking for CVMFS
[2026-02-12 20:30:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 20:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 20:30:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 20:30:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 20:30:56] 2.13.3.0 15397 143013 339008 156177 1 312 19962995 32935937 31298 16776704 0 1000871137 99.563 1130445827 36178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-12 20:30:56] CVMFS is ok
[2026-02-12 20:30:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 20:30:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 20:30:56] Further information can be found at the LHC@home message board.
[2026-02-12 20:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 20:30:56] Checking for apptainer binary...
[2026-02-12 20:30:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 20:30:56] Running /usr/bin/apptainer --version
[2026-02-12 20:30:56] apptainer version 1.4.5-2.el9
[2026-02-12 20:30:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 20:30:56] c7-16-8.aglt2.org
[2026-02-12 20:30:56] apptainer works
[2026-02-12 20:30:56] Set ATHENA_PROC_NUMBER=11
[2026-02-12 20:30:56] Set ATHENA_CORE_NUMBER=11
[2026-02-12 20:30:56] Starting ATLAS job with PandaID=7013405998
[2026-02-12 20:30:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-13 00:43:44]  *** The last 200 lines of the pilot log: ***
[2026-02-13 00:43:45] 2026-02-13 05:42:49,548 | INFO     | job 7013405998 has finished - writing final server update
[2026-02-13 00:43:45] 2026-02-13 05:42:49,548 | INFO     | total number of processed events: 400 (read)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,615 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7013405998/memory_monitor_summary.json (trf name=prmon)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,615 | INFO     | extracted standard info from prmon json
[2026-02-13 00:43:45] 2026-02-13 05:42:49,615 | INFO     | extracted standard memory fields from prmon json
[2026-02-13 00:43:45] 2026-02-13 05:42:49,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-13 00:43:45] 2026-02-13 05:42:49,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-13 00:43:45] 2026-02-13 05:42:49,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-13 00:43:45] 2026-02-13 05:42:49,620 | INFO     | fitting pss+swap vs Time
[2026-02-13 00:43:45] 2026-02-13 05:42:49,621 | INFO     | sum of square deviations: 4672637210.995926
[2026-02-13 00:43:45] 2026-02-13 05:42:49,623 | INFO     | sum of deviations: 18916816280.368385
[2026-02-13 00:43:45] 2026-02-13 05:42:49,624 | INFO     | mean x: 1770953797.0040486
[2026-02-13 00:43:45] 2026-02-13 05:42:49,624 | INFO     | mean y: 2696292.6315789474
[2026-02-13 00:43:45] 2026-02-13 05:42:49,624 | INFO     | intersect: -7166875430.187029
[2026-02-13 00:43:45] 2026-02-13 05:42:49,625 | INFO     | chi2: 2.322511745493877
[2026-02-13 00:43:45] 2026-02-13 05:42:49,629 | INFO     | sum of square deviations: 4394576488.495887
[2026-02-13 00:43:45] 2026-02-13 05:42:49,630 | INFO     | sum of deviations: 34983524208.743774
[2026-02-13 00:43:45] 2026-02-13 05:42:49,630 | INFO     | mean x: 1770953644.5041323
[2026-02-13 00:43:45] 2026-02-13 05:42:49,630 | INFO     | mean y: 2704950.756198347
[2026-02-13 00:43:45] 2026-02-13 05:42:49,630 | INFO     | intersect: -14095172252.486685
[2026-02-13 00:43:45] 2026-02-13 05:42:49,631 | INFO     | chi2: 1.6222075409453092
[2026-02-13 00:43:45] 2026-02-13 05:42:49,631 | INFO     | current chi2=1.6222075409453092 (change=30.152881074005055 %)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,631 | INFO     | sum of square deviations: 4127771790.9957786
[2026-02-13 00:43:45] 2026-02-13 05:42:49,632 | INFO     | sum of deviations: 33698554422.818554
[2026-02-13 00:43:45] 2026-02-13 05:42:49,632 | INFO     | mean x: 1770953492.0042193
[2026-02-13 00:43:45] 2026-02-13 05:42:49,632 | INFO     | mean y: 2704216.181434599
[2026-02-13 00:43:45] 2026-02-13 05:42:49,633 | INFO     | intersect: -14455113621.705376
[2026-02-13 00:43:45] 2026-02-13 05:42:49,633 | INFO     | chi2: 1.6229646433871308
[2026-02-13 00:43:45] 2026-02-13 05:42:49,633 | INFO     | current chi2=1.6229646433871308 (change=-0.04667112084686787 %)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,633 | INFO     | right removable region: 236
[2026-02-13 00:43:45] 2026-02-13 05:42:49,633 | INFO     | sum of square deviations: 4394575878.495887
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | sum of deviations: -25310374698.35537
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | mean x: 1770953949.5041323
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | mean y: 2720337.855371901
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | intersect: 10202455027.798523
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | chi2: 0.748475599431834
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | current chi2=0.748475599431834 (change=67.77301122872589 %)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,635 | INFO     | sum of square deviations: 4127770570.9957786
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | sum of deviations: -24335061938.87763
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | mean x: 1770954102.0042193
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | mean y: 2719772.8776371307
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | intersect: 10443289814.730906
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | chi2: 0.7480151013040519
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | current chi2=0.7480151013040519 (change=0.06152480162768186 %)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,637 | INFO     | left removable region: 20
[2026-02-13 00:43:45] 2026-02-13 05:42:49,638 | INFO     | sum of square deviations: 3124856943.995375
[2026-02-13 00:43:45] 2026-02-13 05:42:49,639 | INFO     | sum of deviations: -3661423438.407414
[2026-02-13 00:43:45] 2026-02-13 05:42:49,639 | INFO     | mean x: 1770954071.5046296
[2026-02-13 00:43:45] 2026-02-13 05:42:49,639 | INFO     | mean y: 2725777.407407407
[2026-02-13 00:43:45] 2026-02-13 05:42:49,639 | INFO     | intersect: 2077768847.2061532
[2026-02-13 00:43:45] 2026-02-13 05:42:49,640 | INFO     | chi2: 0.024485137587297555
[2026-02-13 00:43:45] 2026-02-13 05:42:49,640 | INFO     | current memory leak: -1.17 B/s (using 216 data points, chi2=0.02)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,641 | INFO     | could have reported an average CPU frequency of 3095 MHz (12 samples)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,641 | INFO     | ..............................
[2026-02-13 00:43:45] 2026-02-13 05:42:49,641 | INFO     | . Timing measurements:
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . get job = 0 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . initial setup = 2 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . payload setup = 6 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . stage-in = 0 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . payload execution = 15067 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . stage-out = 3 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | . log creation = 0 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,642 | INFO     | ..............................
[2026-02-13 00:43:45] 2026-02-13 05:42:49,973 | INFO     | 
[2026-02-13 00:43:45] 2026-02-13 05:42:49,973 | INFO     | job summary report
[2026-02-13 00:43:45] 2026-02-13 05:42:49,973 | INFO     | --------------------------------------------------
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | PanDA job id: 7013405998
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | task id: 48431096
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | errors: (none)
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | pilot state: finished 
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | transexitcode: 0
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | exeerrorcode: 0
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | exeerrordiag: 
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | exitcode: 0
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | exitmsg: OK
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | cpuconsumptiontime: 47385 s
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | nevents: 400
[2026-02-13 00:43:45] 2026-02-13 05:42:49,974 | INFO     | neventsw: 0
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | pid: 411946
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | pgrp: 411946
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | corecount: 11
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | event service: False
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | sizes: {0: 2282215, 11: 2282215, 15078: 2313209, 15079: 2313208, 15084: 2322262, 15087: 2322318, 15089: 2322640}
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | --------------------------------------------------
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | 
[2026-02-13 00:43:45] 2026-02-13 05:42:49,975 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-13 00:43:45] 2026-02-13 05:42:50,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | job 7013405998 has completed (purged errors)
[2026-02-13 00:43:45] 2026-02-13 05:42:50,010 | INFO     | overall cleanup function is called
[2026-02-13 00:43:45] 2026-02-13 05:42:50,650 | INFO     | PID=400392 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-13 00:43:45] 2026-02-13 05:42:50,651 | INFO     | .. there are 47 such processes running
[2026-02-13 00:43:45] 2026-02-13 05:42:51,020 | INFO     | --- collectZombieJob: --- 10, [411946]
[2026-02-13 00:43:45] 2026-02-13 05:42:51,021 | INFO     | zombie collector waiting for pid 411946
[2026-02-13 00:43:45] 2026-02-13 05:42:51,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-13 00:43:45] 2026-02-13 05:42:51,021 | INFO     | collected zombie processes
[2026-02-13 00:43:45] 2026-02-13 05:42:51,021 | INFO     | will attempt to kill all subprocesses of pid=411946
[2026-02-13 00:43:45] 2026-02-13 05:42:52,295 | INFO     | process IDs to be killed: [411946] (in reverse order)
[2026-02-13 00:43:45] 2026-02-13 05:42:52,440 | WARNING  | found no corresponding commands to process id(s)
[2026-02-13 00:43:45] 2026-02-13 05:42:52,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-13 00:43:45] 2026-02-13 05:42:52,464 | INFO     | did not find any defunct processes belonging to 411946
[2026-02-13 00:43:45] 2026-02-13 05:42:52,486 | INFO     | did not find any defunct processes belonging to 411946
[2026-02-13 00:43:45] 2026-02-13 05:42:52,486 | INFO     | ready for new job
[2026-02-13 00:43:45] 2026-02-13 05:42:52,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-13 00:43:45] 2026-02-13 05:42:52,489 | INFO     | **************************************
[2026-02-13 00:43:45] 2026-02-13 05:42:52,489 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-13 00:43:45] 2026-02-13 05:42:52,489 | INFO     | **************************************
[2026-02-13 00:43:45] 2026-02-13 05:42:52,489 | INFO     | 
[2026-02-13 00:43:45] 2026-02-13 05:42:52,518 | INFO     | architecture information:
[2026-02-13 00:43:45] 2026-02-13 05:42:52,541 | INFO     | executing command: cat /etc/os-release
[2026-02-13 00:43:45] 2026-02-13 05:42:52,579 | INFO     | cat /etc/os-release:
[2026-02-13 00:43:45] NAME="CentOS Linux"
[2026-02-13 00:43:45] VERSION="7 (Core)"
[2026-02-13 00:43:45] ID="centos"
[2026-02-13 00:43:45] ID_LIKE="rhel fedora"
[2026-02-13 00:43:45] VERSION_ID="7"
[2026-02-13 00:43:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-13 00:43:45] ANSI_COLOR="0;31"
[2026-02-13 00:43:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-13 00:43:45] HOME_URL="https://www.centos.org/"
[2026-02-13 00:43:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-13 00:43:45] 
[2026-02-13 00:43:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-13 00:43:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-13 00:43:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-13 00:43:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-13 00:43:45] 
[2026-02-13 00:43:45] 2026-02-13 05:42:52,580 | INFO     | **************************************
[2026-02-13 00:43:45] 2026-02-13 05:42:53,083 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-13 00:43:45] 2026-02-13 05:42:53,136 | INFO     | sufficient remaining disk space (68032659456 B)
[2026-02-13 00:43:45] 2026-02-13 05:42:53,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-13 00:43:45] 2026-02-13 05:42:53,137 | INFO     | current server update state: UPDATING_FINAL
[2026-02-13 00:43:45] 2026-02-13 05:42:53,137 | INFO     | update_server=False
[2026-02-13 00:43:45] 2026-02-13 05:42:53,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-13 00:43:45] 2026-02-13 05:42:53,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-13 00:43:45] 2026-02-13 05:42:53,137 | INFO     | aborting loop
[2026-02-13 00:43:45] 2026-02-13 05:42:53,261 | INFO     | all job control threads have been joined
[2026-02-13 00:43:45] 2026-02-13 05:42:53,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-13 00:43:45] 2026-02-13 05:42:53,549 | INFO     | all payload control threads have been joined
[2026-02-13 00:43:45] 2026-02-13 05:42:53,564 | INFO     | all data control threads have been joined
[2026-02-13 00:43:45] 2026-02-13 05:42:54,143 | INFO     | [job] retrieve thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,143 | INFO     | [data] copytool_in thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,144 | INFO     | [job] job monitor thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-13 00:43:45] 2026-02-13 05:42:54,237 | INFO     | [job] create_data_payload thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,267 | INFO     | [job] control thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,326 | INFO     | [job] validate thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,555 | INFO     | [payload] control thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,570 | INFO     | [data] control thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,714 | INFO     | [payload] failed_post thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:54,757 | INFO     | [payload] validate_pre thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:55,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-13 00:43:45] 2026-02-13 05:42:55,177 | INFO     | [payload] execute_payloads thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:55,394 | INFO     | [data] copytool_out thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:55,447 | INFO     | [payload] validate_post thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:55,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:56,015 | INFO     | [job] queue monitor thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:42:58,187 | INFO     | [data] queue_monitor thread has finished
[2026-02-13 00:43:45] 2026-02-13 05:43:25,256 | INFO     | PID=400392 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-13 00:43:45] 2026-02-13 05:43:25,256 | INFO     | .. there are 47 such processes running
[2026-02-13 00:43:45] 2026-02-13 05:43:25,257 | INFO     | found 0 job(s) in 20 queues
[2026-02-13 00:43:45] 2026-02-13 05:43:25,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-13 00:43:45] 2026-02-13 05:43:25,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-13 00:43:45] 2026-02-13 05:43:36,867 | INFO     | [monitor] cgroup control has ended
[2026-02-13 00:43:45] 2026-02-13 05:43:38,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219050886976)>', '<ExcThread(monitor, started 140218124461824)>']
[2026-02-13 00:43:45] 2026-02-13 05:43:39,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-13 00:43:45] 2026-02-13 05:43:39,341 | INFO     | [monitor] control thread has ended
[2026-02-13 00:43:45] 2026-02-13 05:43:43,496 | INFO     | all workflow threads have been joined
[2026-02-13 00:43:45] 2026-02-13 05:43:43,496 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-13 00:43:45] 2026-02-13 05:43:43,497 | INFO     | traces error code: 0
[2026-02-13 00:43:45] 2026-02-13 05:43:43,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-13 00:43:45] 2026-02-13 05:43:44,490 [wrapper] ==== pilot stdout END ====
[2026-02-13 00:43:45] 2026-02-13 05:43:44,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-13 00:43:45] 2026-02-13 05:43:44,536 [wrapper] pilotpid: 400392
[2026-02-13 00:43:45] 2026-02-13 05:43:44,581 [wrapper] Pilot exit status: 0
[2026-02-13 00:43:45] 2026-02-13 05:43:44,691 [wrapper] pandaids: 7013405998 7013405998
[2026-02-13 00:43:45] 2026-02-13 05:43:44,851 [wrapper] cleanup supervisor_pilot 1802890 400393
[2026-02-13 00:43:45] 2026-02-13 05:43:44,854 [wrapper] Test setup, not cleaning
[2026-02-13 00:43:45] 2026-02-13 05:43:44,858 [wrapper] apfmon messages muted
[2026-02-13 00:43:45] 2026-02-13 05:43:44,862 [wrapper] ==== wrapper stdout END ====
[2026-02-13 00:43:45] 2026-02-13 05:43:44,867 [wrapper] ==== wrapper stderr END ====
[2026-02-13 00:43:45]  *** Error codes and diagnostics ***
[2026-02-13 00:43:45]     "exeErrorCode": 0,
[2026-02-13 00:43:45]     "exeErrorDiag": "",
[2026-02-13 00:43:45]     "pilotErrorCode": 0,
[2026-02-13 00:43:45]     "pilotErrorDiag": "",
[2026-02-13 00:43:45]  *** Listing of results directory ***
[2026-02-13 00:43:45] total 1614920
[2026-02-13 00:43:45] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas    584627 Feb 12 04:23 pilot3.tar.gz
[2026-02-13 00:43:45] -rwx------. 1 boincer umatlas     36322 Feb 12 04:28 runpilot2-wrapper.sh
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas      5111 Feb 12 04:31 queuedata.json
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas       100 Feb 12 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-13 00:43:45] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 12 11:56 run_atlas
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas       105 Feb 12 11:56 job.xml
[2026-02-13 00:43:45] -rw-r--r--. 3 boincer umatlas 682111662 Feb 12 11:56 EVNT.48431094._000223.pool.root.1
[2026-02-13 00:43:45] -rw-r--r--. 3 boincer umatlas 682111662 Feb 12 11:56 ATLAS.root_0
[2026-02-13 00:43:45] -rw-r--r--. 2 boincer umatlas     15845 Feb 12 11:56 start_atlas.sh
[2026-02-13 00:43:45] drwxrwx--x. 2 boincer umatlas      4096 Feb 12 11:56 shared
[2026-02-13 00:43:45] -rw-r--r--. 2 boincer umatlas    597968 Feb 12 11:56 input.tar.gz
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas         0 Feb 12 11:56 boinc_lockfile
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas      2556 Feb 12 20:30 pandaJob.out
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas        57 Feb 12 20:30 setup.sh.local
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas   1000262 Feb 12 20:31 agis_schedconf.cvmfs.json
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas       429 Feb 12 20:31 workernode_map.json
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas      6945 Feb 13 00:37 init_data.xml
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas 280772052 Feb 13 00:40 HITS.48431096._037866.pool.root.1
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas       531 Feb 13 00:40 boinc_task_state.xml
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas      1045 Feb 13 00:42 memory_monitor_summary.json
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas   1512955 Feb 13 00:42 agis_ddmendpoints.agis.ALL.json
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas    526807 Feb 13 00:42 log.48431096._037866.job.log.tgz.1
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas      6347 Feb 13 00:42 heartbeat.json
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas        96 Feb 13 00:43 pilot_heartbeat.json
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas      8192 Feb 13 00:43 boinc_mmap_file
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas      4819 Feb 13 00:43 pilotlog.txt
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas        28 Feb 13 00:43 wrapper_checkpoint.txt
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas   1839354 Feb 13 00:43 log.48431096._037866.job.log.1
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas       357 Feb 13 00:43 output.list
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas       620 Feb 13 00:43 runtime_log
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas   2385920 Feb 13 00:43 result.tar.gz
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas       784 Feb 13 00:43 ZUgNDmuAiA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm65lKDmcKW8um.diag
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas      9424 Feb 13 00:43 runtime_log.err
[2026-02-13 00:43:45] -rw-r--r--. 1 boincer umatlas     23529 Feb 13 00:43 stderr.txt
[2026-02-13 00:43:45] HITS file was successfully produced:
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas 280772052 Feb 13 00:40 shared/HITS.pool.root.1
[2026-02-13 00:43:45]  *** Contents of shared directory: ***
[2026-02-13 00:43:45] total 943260
[2026-02-13 00:43:45] -rw-r--r--. 3 boincer umatlas 682111662 Feb 12 11:56 ATLAS.root_0
[2026-02-13 00:43:45] -rw-r--r--. 2 boincer umatlas     15845 Feb 12 11:56 start_atlas.sh
[2026-02-13 00:43:45] -rw-r--r--. 2 boincer umatlas    597968 Feb 12 11:56 input.tar.gz
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas 280772052 Feb 13 00:40 HITS.pool.root.1
[2026-02-13 00:43:45] -rw-------. 1 boincer umatlas   2385920 Feb 13 00:43 result.tar.gz
00:43:47 (386632): run_atlas exited; CPU time 48110.426256
00:43:47 (386632): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN