Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:44:17 (3853626): wrapper (7.7.26015): starting
10:44:17 (3853626): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 10:44:17] Arguments: --nthreads 4
[2026-02-15 10:44:17] Threads: 4
[2026-02-15 10:44:17] Checking for CVMFS
[2026-02-15 10:44:17] No cvmfs_config command found, will try listing directly
[2026-02-15 10:44:17] CVMFS is ok
[2026-02-15 10:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 10:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 10:44:17] Further information can be found at the LHC@home message board.
[2026-02-15 10:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 10:44:17] Checking for apptainer binary...
[2026-02-15 10:44:17] which: no apptainer in ((null))
[2026-02-15 10:44:17] apptainer is not installed, using version from CVMFS
[2026-02-15 10:44:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 10:44:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-15 10:44:18] apptainer works
[2026-02-15 10:44:18] Set ATHENA_PROC_NUMBER=4
[2026-02-15 10:44:18] Set ATHENA_CORE_NUMBER=4
[2026-02-15 10:44:18] Starting ATLAS job with PandaID=7013399746
[2026-02-15 10:44:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 14:43:08]  *** The last 200 lines of the pilot log: ***
[2026-02-15 14:43:08] 2026-02-15 13:41:58,762 | INFO     | time since job start (14240s) is within the limit (349056.0s)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,434 | INFO     | job 7013399746 has state=finished
[2026-02-15 14:43:08] 2026-02-15 13:41:59,434 | INFO     | preparing for final server update for job 7013399746 in state='finished'
[2026-02-15 14:43:08] 2026-02-15 13:41:59,434 | INFO     | reading metadata from: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7013399746/jobReport.json
[2026-02-15 14:43:08] 2026-02-15 13:41:59,437 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot44/slots/0/workernode_map.json
[2026-02-15 14:43:08] 2026-02-15 13:41:59,437 | INFO     | this job has now completed (state=finished)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,437 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,437 | INFO     | log transfer has been attempted: DONE
[2026-02-15 14:43:08] 2026-02-15 13:41:59,438 | INFO     | job 7013399746 has finished - writing final server update
[2026-02-15 14:43:08] 2026-02-15 13:41:59,438 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3302660/.job.ad'
[2026-02-15 14:43:08] 2026-02-15 13:41:59,438 | INFO     | total number of processed events: 400 (read)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,462 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7013399746/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,463 | INFO     | extracted standard info from prmon json
[2026-02-15 14:43:08] 2026-02-15 13:41:59,463 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 14:43:08] 2026-02-15 13:41:59,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 14:43:08] 2026-02-15 13:41:59,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 14:43:08] 2026-02-15 13:41:59,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 14:43:08] 2026-02-15 13:41:59,468 | INFO     | fitting pss+swap vs Time
[2026-02-15 14:43:08] 2026-02-15 13:41:59,468 | INFO     | sum of square deviations: 3922276332.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,470 | INFO     | sum of deviations: 29603962277.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,470 | INFO     | mean x: 1771155782.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,470 | INFO     | mean y: 2363517.8669527895
[2026-02-15 14:43:08] 2026-02-15 13:41:59,470 | INFO     | intersect: -13365697403.603697
[2026-02-15 14:43:08] 2026-02-15 13:41:59,471 | INFO     | chi2: 1.3167191085203274
[2026-02-15 14:43:08] 2026-02-15 13:41:59,471 | INFO     | sum of square deviations: 3675146117.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | sum of deviations: 28873515947.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | mean x: 1771155629.5
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | mean y: 2363067.052631579
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | intersect: -13912591246.31
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | chi2: 1.3172722470489973
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | current chi2=1.3172722470489973 (change=-0.04200884798364381 %)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,473 | INFO     | right removable region: 227
[2026-02-15 14:43:08] 2026-02-15 13:41:59,474 | INFO     | sum of square deviations: 3675146117.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,475 | INFO     | sum of deviations: -1031777454.5
[2026-02-15 14:43:08] 2026-02-15 13:41:59,475 | INFO     | mean x: 1771155934.5
[2026-02-15 14:43:08] 2026-02-15 13:41:59,476 | INFO     | mean y: 2382221.76754386
[2026-02-15 14:43:08] 2026-02-15 13:41:59,476 | INFO     | intersect: 499624699.6020595
[2026-02-15 14:43:08] 2026-02-15 13:41:59,476 | INFO     | chi2: 0.008270361273022485
[2026-02-15 14:43:08] 2026-02-15 13:41:59,476 | INFO     | current chi2=0.008270361273022485 (change=99.37189631262234 %)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,477 | INFO     | sum of square deviations: 3438620752.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,478 | INFO     | sum of deviations: -473217077.0000006
[2026-02-15 14:43:08] 2026-02-15 13:41:59,478 | INFO     | mean x: 1771156087.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,478 | INFO     | mean y: 2381857.143497758
[2026-02-15 14:43:08] 2026-02-15 13:41:59,479 | INFO     | intersect: 246125313.270031
[2026-02-15 14:43:08] 2026-02-15 13:41:59,479 | INFO     | chi2: 0.007840956682536945
[2026-02-15 14:43:08] 2026-02-15 13:41:59,479 | INFO     | current chi2=0.007840956682536945 (change=5.192089877454774 %)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,479 | INFO     | left removable region: 20
[2026-02-15 14:43:08] 2026-02-15 13:41:59,479 | INFO     | sum of square deviations: 2750295288.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,481 | INFO     | sum of deviations: 2501805017.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,481 | INFO     | mean x: 1771156209.0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,481 | INFO     | mean y: 2379552.231884058
[2026-02-15 14:43:08] 2026-02-15 13:41:59,481 | INFO     | intersect: -1608751990.2248402
[2026-02-15 14:43:08] 2026-02-15 13:41:59,481 | INFO     | chi2: 0.003383331924823785
[2026-02-15 14:43:08] 2026-02-15 13:41:59,481 | INFO     | current memory leak: 0.91 B/s (using 207 data points, chi2=0.00)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,482 | INFO     | could have reported an average CPU frequency of 2730 MHz (11 samples)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,482 | INFO     | ..............................
[2026-02-15 14:43:08] 2026-02-15 13:41:59,482 | INFO     | . Timing measurements:
[2026-02-15 14:43:08] 2026-02-15 13:41:59,482 | INFO     | . get job = 0 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,482 | INFO     | . initial setup = 8 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,483 | INFO     | . payload setup = 8 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,483 | INFO     | . stage-in = 0 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,483 | INFO     | . payload execution = 14210 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,483 | INFO     | . stage-out = 1 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,483 | INFO     | . log creation = 0 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,483 | INFO     | ..............................
[2026-02-15 14:43:08] 2026-02-15 13:41:59,766 | INFO     | 
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | job summary report
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | --------------------------------------------------
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | PanDA job id: 7013399746
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | task id: 48431096
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | errors: (none)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 14:43:08] 2026-02-15 13:41:59,767 | INFO     | pilot state: finished 
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | transexitcode: 0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | exeerrorcode: 0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | exeerrordiag: 
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | exitcode: 0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | exitmsg: OK
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | cpuconsumptiontime: 54644 s
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | nevents: 400
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | neventsw: 0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | pid: 3862642
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | pgrp: 3862642
[2026-02-15 14:43:08] 2026-02-15 13:41:59,768 | INFO     | corecount: 4
[2026-02-15 14:43:08] 2026-02-15 13:41:59,769 | INFO     | event service: False
[2026-02-15 14:43:08] 2026-02-15 13:41:59,769 | INFO     | sizes: {0: 2282020, 1: 2282226, 11: 2282254, 14223: 2313514, 14225: 2322534, 14227: 2322590, 14229: 2322912}
[2026-02-15 14:43:08] 2026-02-15 13:41:59,769 | INFO     | --------------------------------------------------
[2026-02-15 14:43:08] 2026-02-15 13:41:59,769 | INFO     | 
[2026-02-15 14:43:08] 2026-02-15 13:41:59,769 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-02-15 14:43:08] 2026-02-15 13:41:59,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 14:43:08] 2026-02-15 13:41:59,811 | INFO     | job 7013399746 has completed (purged errors)
[2026-02-15 14:43:08] 2026-02-15 13:41:59,812 | INFO     | overall cleanup function is called
[2026-02-15 14:43:08] 2026-02-15 13:42:00,820 | INFO     | --- collectZombieJob: --- 10, [3862642]
[2026-02-15 14:43:08] 2026-02-15 13:42:00,821 | INFO     | zombie collector waiting for pid 3862642
[2026-02-15 14:43:08] 2026-02-15 13:42:00,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 14:43:08] 2026-02-15 13:42:00,821 | INFO     | collected zombie processes
[2026-02-15 14:43:08] 2026-02-15 13:42:00,821 | INFO     | will attempt to kill all subprocesses of pid=3862642
[2026-02-15 14:43:08] 2026-02-15 13:42:01,484 | INFO     | process IDs to be killed: [3862642] (in reverse order)
[2026-02-15 14:43:08] 2026-02-15 13:42:01,784 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 14:43:08] 2026-02-15 13:42:01,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 14:43:08] 2026-02-15 13:42:01,811 | INFO     | did not find any defunct processes belonging to 3862642
[2026-02-15 14:43:08] 2026-02-15 13:42:01,834 | INFO     | did not find any defunct processes belonging to 3862642
[2026-02-15 14:43:08] 2026-02-15 13:42:01,834 | INFO     | ready for new job
[2026-02-15 14:43:08] 2026-02-15 13:42:01,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 14:43:08] 2026-02-15 13:42:01,837 | INFO     | **************************************
[2026-02-15 14:43:08] 2026-02-15 13:42:01,838 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 14:43:08] 2026-02-15 13:42:01,838 | INFO     | **************************************
[2026-02-15 14:43:08] 2026-02-15 13:42:01,838 | INFO     | 
[2026-02-15 14:43:08] 2026-02-15 13:42:01,846 | INFO     | architecture information:
[2026-02-15 14:43:08] 2026-02-15 13:42:01,847 | INFO     | executing command: cat /etc/os-release
[2026-02-15 14:43:08] 2026-02-15 13:42:01,875 | INFO     | cat /etc/os-release:
[2026-02-15 14:43:08] NAME="CentOS Linux"
[2026-02-15 14:43:08] VERSION="7 (Core)"
[2026-02-15 14:43:08] ID="centos"
[2026-02-15 14:43:08] ID_LIKE="rhel fedora"
[2026-02-15 14:43:08] VERSION_ID="7"
[2026-02-15 14:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 14:43:08] ANSI_COLOR="0;31"
[2026-02-15 14:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 14:43:08] HOME_URL="https://www.centos.org/"
[2026-02-15 14:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 14:43:08] 
[2026-02-15 14:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 14:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 14:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 14:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 14:43:08] 
[2026-02-15 14:43:08] 2026-02-15 13:42:01,876 | INFO     | **************************************
[2026-02-15 14:43:08] 2026-02-15 13:42:02,379 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-02-15 14:43:08] 2026-02-15 13:42:02,416 | INFO     | sufficient remaining disk space (3206825377792 B)
[2026-02-15 14:43:08] 2026-02-15 13:42:02,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 14:43:08] 2026-02-15 13:42:02,417 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 14:43:08] 2026-02-15 13:42:02,417 | INFO     | update_server=False
[2026-02-15 14:43:08] 2026-02-15 13:42:02,417 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 14:43:08] 2026-02-15 13:42:02,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 14:43:08] 2026-02-15 13:42:02,418 | INFO     | aborting loop
[2026-02-15 14:43:08] 2026-02-15 13:42:03,395 | INFO     | all payload control threads have been joined
[2026-02-15 14:43:08] 2026-02-15 13:42:03,423 | INFO     | [job] job monitor thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:03,423 | INFO     | [job] retrieve thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:03,496 | INFO     | all data control threads have been joined
[2026-02-15 14:43:08] 2026-02-15 13:42:03,497 | INFO     | [payload] failed_post thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:03,596 | INFO     | all job control threads have been joined
[2026-02-15 14:43:08] 2026-02-15 13:42:03,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 14:43:08] 2026-02-15 13:42:03,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 14:43:08] 2026-02-15 13:42:03,893 | INFO     | [job] validate thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:03,914 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:03,944 | INFO     | [payload] validate_post thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:03,954 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:04,178 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:04,307 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:04,343 | INFO     | [data] copytool_in thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:04,401 | INFO     | [payload] control thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:04,502 | INFO     | [data] control thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:04,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 14:43:08] 2026-02-15 13:42:04,602 | INFO     | [job] control thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:05,594 | INFO     | [job] queue monitor thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:05,680 | INFO     | [data] copytool_out thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:07,653 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 14:43:08] 2026-02-15 13:42:32,718 | INFO     | PID=3857611 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-15 14:43:08] 2026-02-15 13:42:32,718 | INFO     | .. there are 25 such processes running
[2026-02-15 14:43:08] 2026-02-15 13:42:32,718 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 14:43:08] 2026-02-15 13:42:32,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 14:43:08] 2026-02-15 13:42:32,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 14:43:08] 2026-02-15 13:43:02,133 | INFO     | [monitor] cgroup control has ended
[2026-02-15 14:43:08] 2026-02-15 13:43:03,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22366837405504)>', '<ExcThread(monitor, started 22366597162752)>']
[2026-02-15 14:43:08] 2026-02-15 13:43:03,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 14:43:08] 2026-02-15 13:43:03,868 | INFO     | [monitor] control thread has ended
[2026-02-15 14:43:08] 2026-02-15 13:43:08,164 | INFO     | all workflow threads have been joined
[2026-02-15 14:43:08] 2026-02-15 13:43:08,166 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 14:43:08] 2026-02-15 13:43:08,166 | INFO     | traces error code: 0
[2026-02-15 14:43:08] 2026-02-15 13:43:08,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 14:43:08] 2026-02-15 13:43:08,375 [wrapper] ==== pilot stdout END ====
[2026-02-15 14:43:08] 2026-02-15 13:43:08,379 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 14:43:08] 2026-02-15 13:43:08,383 [wrapper] pilotpid: 3857611
[2026-02-15 14:43:08] 2026-02-15 13:43:08,387 [wrapper] Pilot exit status: 0
[2026-02-15 14:43:08] 2026-02-15 13:43:08,403 [wrapper] pandaids: 7013399746
[2026-02-15 14:43:08] 2026-02-15 13:43:08,581 [wrapper] cleanup supervisor_pilot  228910 3857612
[2026-02-15 14:43:08] 2026-02-15 13:43:08,584 [wrapper] Test setup, not cleaning
[2026-02-15 14:43:08] 2026-02-15 13:43:08,591 [wrapper] apfmon messages muted
[2026-02-15 14:43:08] 2026-02-15 13:43:08,596 [wrapper] ==== wrapper stdout END ====
[2026-02-15 14:43:08] 2026-02-15 13:43:08,599 [wrapper] ==== wrapper stderr END ====
[2026-02-15 14:43:08]  *** Error codes and diagnostics ***
[2026-02-15 14:43:08]     "exeErrorCode": 0,
[2026-02-15 14:43:08]     "exeErrorDiag": "",
[2026-02-15 14:43:08]     "pilotErrorCode": 0,
[2026-02-15 14:43:08]     "pilotErrorDiag": "",
[2026-02-15 14:43:08]  *** Listing of results directory ***
[2026-02-15 14:43:08] total 1505332
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc    584627 Feb 12 08:21 pilot3.tar.gz
[2026-02-15 14:43:08] -rwx------ 1 boinc boinc     36322 Feb 12 08:23 runpilot2-wrapper.sh
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc      5111 Feb 12 08:23 queuedata.json
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc       100 Feb 12 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 14:43:08] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 13:26 run_atlas
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc       105 Feb 12 13:26 job.xml
[2026-02-15 14:43:08] -rw------- 2 boinc boinc 131334144 Feb 12 14:00 copy_MHf8jH
[2026-02-15 14:43:08] -rw------- 2 boinc boinc  36110336 Feb 12 17:26 copy_bgdpGe
[2026-02-15 14:43:08] -rw------- 2 boinc boinc 407109632 Feb 14 21:05 copy_tA7j5Y
[2026-02-15 14:43:08] -rw-r--r-- 2 boinc boinc 677043451 Feb 15 10:44 EVNT.48431094._000195.pool.root.1
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc      6694 Feb 15 10:44 init_data.xml
[2026-02-15 14:43:08] -rw-r--r-- 2 boinc boinc     15845 Feb 15 10:44 start_atlas.sh
[2026-02-15 14:43:08] drwxrwx--x 2 boinc boinc      4096 Feb 15 10:44 shared
[2026-02-15 14:43:08] -rw-r--r-- 2 boinc boinc    597957 Feb 15 10:44 input.tar.gz
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc         0 Feb 15 10:44 boinc_lockfile
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc      2556 Feb 15 10:44 pandaJob.out
[2026-02-15 14:43:08] -rw------- 1 boinc boinc   1000934 Feb 15 10:44 agis_schedconf.cvmfs.json
[2026-02-15 14:43:08] -rw------- 1 boinc boinc       442 Feb 15 10:44 workernode_map.json
[2026-02-15 14:43:08] drwx------ 5 boinc boinc      4096 Feb 15 10:44 pilot3
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc       531 Feb 15 14:41 boinc_task_state.xml
[2026-02-15 14:43:08] -rw------- 1 boinc boinc 281118330 Feb 15 14:41 HITS.48431096._036605.pool.root.1
[2026-02-15 14:43:08] -rw------- 1 boinc boinc      1033 Feb 15 14:41 memory_monitor_summary.json
[2026-02-15 14:43:08] -rw------- 1 boinc boinc   1513015 Feb 15 14:41 agis_ddmendpoints.agis.ALL.json
[2026-02-15 14:43:08] -rw------- 1 boinc boinc    419071 Feb 15 14:41 log.48431096._036605.job.log.tgz.1
[2026-02-15 14:43:08] -rw------- 1 boinc boinc        95 Feb 15 14:41 pilot_heartbeat.json
[2026-02-15 14:43:08] -rw------- 1 boinc boinc      6357 Feb 15 14:41 heartbeat.json
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc      8192 Feb 15 14:43 boinc_mmap_file
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc        28 Feb 15 14:43 wrapper_checkpoint.txt
[2026-02-15 14:43:08] -rw------- 1 boinc boinc      4831 Feb 15 14:43 pilotlog.txt
[2026-02-15 14:43:08] -rw------- 1 boinc boinc   1981854 Feb 15 14:43 log.48431096._036605.job.log.1
[2026-02-15 14:43:08] -rw------- 1 boinc boinc       357 Feb 15 14:43 output.list
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc       620 Feb 15 14:43 runtime_log
[2026-02-15 14:43:08] -rw------- 1 boinc boinc   2416640 Feb 15 14:43 result.tar.gz
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc      9205 Feb 15 14:43 runtime_log.err
[2026-02-15 14:43:08] -rw------- 1 boinc boinc       666 Feb 15 14:43 QvPODmgDgA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSqkKDmj8L7Rm.diag
[2026-02-15 14:43:08] -rw-r--r-- 1 boinc boinc     21126 Feb 15 14:43 stderr.txt
[2026-02-15 14:43:08] HITS file was successfully produced:
[2026-02-15 14:43:08] -rw------- 1 boinc boinc 281118330 Feb 15 14:41 shared/HITS.pool.root.1
[2026-02-15 14:43:08]  *** Contents of shared directory: ***
[2026-02-15 14:43:08] total 1499776
[2026-02-15 14:43:08] -rw------- 2 boinc boinc 131334144 Feb 12 14:00 copy_MHf8jH
[2026-02-15 14:43:08] -rw------- 2 boinc boinc  36110336 Feb 12 17:26 copy_bgdpGe
[2026-02-15 14:43:08] -rw------- 2 boinc boinc 407109632 Feb 14 21:05 copy_tA7j5Y
[2026-02-15 14:43:08] -rw-r--r-- 2 boinc boinc 677043451 Feb 15 10:44 ATLAS.root_0
[2026-02-15 14:43:08] -rw-r--r-- 2 boinc boinc     15845 Feb 15 10:44 start_atlas.sh
[2026-02-15 14:43:08] -rw-r--r-- 2 boinc boinc    597957 Feb 15 10:44 input.tar.gz
[2026-02-15 14:43:08] -rw------- 1 boinc boinc 281118330 Feb 15 14:41 HITS.pool.root.1
[2026-02-15 14:43:08] -rw------- 1 boinc boinc   2416640 Feb 15 14:43 result.tar.gz
14:43:10 (3853626): run_atlas exited; CPU time 55503.565632
14:43:10 (3853626): called boinc_finish(0)

</stderr_txt>
]]>

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