Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:18 (5999): wrapper (7.7.26015): starting
19:23:18 (5999): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 19:23:18] Arguments: --nthreads 8
[2026-02-12 19:23:18] Threads: 8
[2026-02-12 19:23:18] Checking for CVMFS
[2026-02-12 19:23:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 19:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 19:23:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 19:23:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 19:23:23] 2.11.2.0 9753 84729 136168 156167 3 53 17848009 25165824 4834 130560 0 31200448 99.851 23563930 2890 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-12 19:23:23] CVMFS is ok
[2026-02-12 19:23:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 19:23:23] Checking for apptainer binary...
[2026-02-12 19:23:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 19:23:23] Running /usr/bin/apptainer --version
[2026-02-12 19:23:23] apptainer version 1.3.2-1.el7
[2026-02-12 19:23:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 19:23:37] cg-vwn490.simple-grid.lan
[2026-02-12 19:23:37] apptainer works
[2026-02-12 19:23:37] Set ATHENA_PROC_NUMBER=8
[2026-02-12 19:23:37] Set ATHENA_CORE_NUMBER=8
[2026-02-12 19:23:37] Starting ATLAS job with PandaID=7009001919
[2026-02-12 19:23:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 23:27:11]  *** The last 200 lines of the pilot log: ***
[2026-02-12 23:27:12] 2026-02-12 22:26:12,073 | INFO     | total number of processed events: 400 (read)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,075 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7009001919/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,075 | INFO     | extracted standard info from prmon json
[2026-02-12 23:27:12] 2026-02-12 22:26:12,075 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 23:27:12] 2026-02-12 22:26:12,076 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 23:27:12] 2026-02-12 22:26:12,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 23:27:12] 2026-02-12 22:26:12,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 23:27:12] 2026-02-12 22:26:12,081 | INFO     | fitting pss+swap vs Time
[2026-02-12 23:27:12] 2026-02-12 22:26:12,081 | INFO     | sum of square deviations: 3772712597.5
[2026-02-12 23:27:12] 2026-02-12 22:26:12,083 | INFO     | sum of deviations: 73884752968.49998
[2026-02-12 23:27:12] 2026-02-12 22:26:12,083 | INFO     | mean x: 1770928155.5
[2026-02-12 23:27:12] 2026-02-12 22:26:12,083 | INFO     | mean y: 2435780.9260869566
[2026-02-12 23:27:12] 2026-02-12 22:26:12,084 | INFO     | intersect: -34679397492.242775
[2026-02-12 23:27:12] 2026-02-12 22:26:12,084 | INFO     | chi2: 7.024544412517452
[2026-02-12 23:27:12] 2026-02-12 22:26:12,084 | INFO     | sum of square deviations: 3531973200.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,086 | INFO     | sum of deviations: 87278797804.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,086 | INFO     | mean x: 1770928003.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,087 | INFO     | mean y: 2444095.56
[2026-02-12 23:27:12] 2026-02-12 22:26:12,087 | INFO     | intersect: -43759062107.05743
[2026-02-12 23:27:12] 2026-02-12 22:26:12,087 | INFO     | chi2: 6.317624906701876
[2026-02-12 23:27:12] 2026-02-12 22:26:12,087 | INFO     | current chi2=6.317624906701876 (change=10.063563760176025 %)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,087 | INFO     | right removable region: 224
[2026-02-12 23:27:12] 2026-02-12 22:26:12,088 | INFO     | sum of square deviations: 3531973200.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,089 | INFO     | sum of deviations: -4927634289.999998
[2026-02-12 23:27:12] 2026-02-12 22:26:12,090 | INFO     | mean x: 1770928308.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,090 | INFO     | mean y: 2485662.3066666666
[2026-02-12 23:27:12] 2026-02-12 22:26:12,090 | INFO     | intersect: 2473197233.853268
[2026-02-12 23:27:12] 2026-02-12 22:26:12,090 | INFO     | chi2: 2.2485252738098516
[2026-02-12 23:27:12] 2026-02-12 22:26:12,091 | INFO     | current chi2=2.2485252738098516 (change=67.99044689925981 %)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,091 | INFO     | sum of square deviations: 3301699115.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,093 | INFO     | sum of deviations: -41898491476.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,093 | INFO     | mean x: 1770928460.5
[2026-02-12 23:27:12] 2026-02-12 22:26:12,093 | INFO     | mean y: 2509979.8181818184
[2026-02-12 23:27:12] 2026-02-12 22:26:12,093 | INFO     | intersect: 22475554440.40194
[2026-02-12 23:27:12] 2026-02-12 22:26:12,094 | INFO     | chi2: 0.9551617567843257
[2026-02-12 23:27:12] 2026-02-12 22:26:12,094 | INFO     | current chi2=0.9551617567843257 (change=57.520523878038475 %)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,094 | INFO     | sum of square deviations: 3081657780.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,096 | INFO     | sum of deviations: -39908685628.00001
[2026-02-12 23:27:12] 2026-02-12 22:26:12,096 | INFO     | mean x: 1770928613.0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,096 | INFO     | mean y: 2508564.0279069766
[2026-02-12 23:27:12] 2026-02-12 22:26:12,096 | INFO     | intersect: 22936733689.391144
[2026-02-12 23:27:12] 2026-02-12 22:26:12,097 | INFO     | chi2: 0.9426590725212539
[2026-02-12 23:27:12] 2026-02-12 22:26:12,097 | INFO     | current chi2=0.9426590725212539 (change=1.3089598881307456 %)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,097 | INFO     | left removable region: 30
[2026-02-12 23:27:12] 2026-02-12 22:26:12,097 | INFO     | sum of square deviations: 2263977332.5
[2026-02-12 23:27:12] 2026-02-12 22:26:12,099 | INFO     | sum of deviations: -2509785647.000001
[2026-02-12 23:27:12] 2026-02-12 22:26:12,099 | INFO     | mean x: 1770928887.5
[2026-02-12 23:27:12] 2026-02-12 22:26:12,099 | INFO     | mean y: 2501134.556701031
[2026-02-12 23:27:12] 2026-02-12 22:26:12,099 | INFO     | intersect: 1965706260.2887535
[2026-02-12 23:27:12] 2026-02-12 22:26:12,099 | INFO     | chi2: 0.04909190699549082
[2026-02-12 23:27:12] 2026-02-12 22:26:12,100 | INFO     | current memory leak: -1.11 B/s (using 194 data points, chi2=0.05)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,100 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,100 | INFO     | ..............................
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . Timing measurements:
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . get job = 0 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . initial setup = 92 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . payload setup = 112 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . stage-in = 0 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . payload execution = 14118 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . stage-out = 3 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | . log creation = 1 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,101 | INFO     | ..............................
[2026-02-12 23:27:12] 2026-02-12 22:26:12,422 | INFO     | 
[2026-02-12 23:27:12] 2026-02-12 22:26:12,422 | INFO     | job summary report
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | --------------------------------------------------
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | PanDA job id: 7009001919
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | task id: 48318034
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | errors: (none)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | pilot state: finished 
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | transexitcode: 0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | exeerrorcode: 0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | exeerrordiag: 
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | exitcode: 0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | exitmsg: OK
[2026-02-12 23:27:12] 2026-02-12 22:26:12,423 | INFO     | cpuconsumptiontime: 52640 s
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | nevents: 400
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | neventsw: 0
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | pid: 14582
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | pgrp: 14582
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | corecount: 8
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | event service: False
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | sizes: {0: 2281750, 1: 2282151, 2: 2282239, 12: 2282239, 14235: 2312681, 14240: 2321863, 14243: 2322001}
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | --------------------------------------------------
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | 
[2026-02-12 23:27:12] 2026-02-12 22:26:12,424 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-12 23:27:12] 2026-02-12 22:26:12,754 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,754 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,754 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,756 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 23:27:12] 2026-02-12 22:26:12,757 | INFO     | job 7009001919 has completed (purged errors)
[2026-02-12 23:27:12] 2026-02-12 22:26:12,757 | INFO     | overall cleanup function is called
[2026-02-12 23:27:12] 2026-02-12 22:26:13,768 | INFO     | --- collectZombieJob: --- 10, [14582]
[2026-02-12 23:27:12] 2026-02-12 22:26:13,768 | INFO     | zombie collector waiting for pid 14582
[2026-02-12 23:27:12] 2026-02-12 22:26:13,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 23:27:12] 2026-02-12 22:26:13,769 | INFO     | collected zombie processes
[2026-02-12 23:27:12] 2026-02-12 22:26:13,769 | INFO     | will attempt to kill all subprocesses of pid=14582
[2026-02-12 23:27:12] 2026-02-12 22:26:13,880 | INFO     | process IDs to be killed: [14582] (in reverse order)
[2026-02-12 23:27:12] 2026-02-12 22:26:14,583 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 23:27:12] 2026-02-12 22:26:14,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 23:27:12] 2026-02-12 22:26:14,586 | INFO     | did not find any defunct processes belonging to 14582
[2026-02-12 23:27:12] 2026-02-12 22:26:14,588 | INFO     | did not find any defunct processes belonging to 14582
[2026-02-12 23:27:12] 2026-02-12 22:26:14,588 | INFO     | ready for new job
[2026-02-12 23:27:12] 2026-02-12 22:26:14,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 23:27:12] 2026-02-12 22:26:14,590 | INFO     | **************************************
[2026-02-12 23:27:12] 2026-02-12 22:26:14,590 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 23:27:12] 2026-02-12 22:26:14,590 | INFO     | **************************************
[2026-02-12 23:27:12] 2026-02-12 22:26:14,591 | INFO     | 
[2026-02-12 23:27:12] 2026-02-12 22:26:14,591 | INFO     | pilot is running in a VM
[2026-02-12 23:27:12] 2026-02-12 22:26:14,591 | INFO     | architecture information:
[2026-02-12 23:27:12] 2026-02-12 22:26:14,601 | INFO     | executing command: cat /etc/os-release
[2026-02-12 23:27:12] 2026-02-12 22:26:14,883 | INFO     | cat /etc/os-release:
[2026-02-12 23:27:12] NAME="CentOS Linux"
[2026-02-12 23:27:12] VERSION="7 (Core)"
[2026-02-12 23:27:12] ID="centos"
[2026-02-12 23:27:12] ID_LIKE="rhel fedora"
[2026-02-12 23:27:12] VERSION_ID="7"
[2026-02-12 23:27:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 23:27:12] ANSI_COLOR="0;31"
[2026-02-12 23:27:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 23:27:12] HOME_URL="https://www.centos.org/"
[2026-02-12 23:27:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 23:27:12] 
[2026-02-12 23:27:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 23:27:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 23:27:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 23:27:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 23:27:12] 
[2026-02-12 23:27:12] 2026-02-12 22:26:14,883 | INFO     | **************************************
[2026-02-12 23:27:12] 2026-02-12 22:26:15,386 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-12 23:27:12] 2026-02-12 22:26:15,571 | INFO     | sufficient remaining disk space (493997785088 B)
[2026-02-12 23:27:12] 2026-02-12 22:26:15,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 23:27:12] 2026-02-12 22:26:15,571 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 23:27:12] 2026-02-12 22:26:15,571 | INFO     | update_server=False
[2026-02-12 23:27:12] 2026-02-12 22:26:15,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 23:27:12] 2026-02-12 22:26:15,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 23:27:12] 2026-02-12 22:26:15,755 | INFO     | all job control threads have been joined
[2026-02-12 23:27:12] 2026-02-12 22:26:15,969 | INFO     | all data control threads have been joined
[2026-02-12 23:27:12] 2026-02-12 22:26:16,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 23:27:12] 2026-02-12 22:26:16,340 | INFO     | aborting loop
[2026-02-12 23:27:12] 2026-02-12 22:26:16,577 | INFO     | [job] retrieve thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:16,761 | INFO     | [job] control thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:16,931 | INFO     | all payload control threads have been joined
[2026-02-12 23:27:12] 2026-02-12 22:26:16,975 | INFO     | [data] control thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:16,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 23:27:12] 2026-02-12 22:26:17,023 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:17,051 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:17,114 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:17,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 23:27:12] 2026-02-12 22:26:17,349 | INFO     | [job] job monitor thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:17,912 | INFO     | [job] validate thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:17,937 | INFO     | [payload] control thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:17,941 | INFO     | [data] copytool_in thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:18,033 | INFO     | [payload] validate_post thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:18,083 | INFO     | [payload] failed_post thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:18,227 | INFO     | [job] queue monitor thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:19,005 | INFO     | [data] copytool_out thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:19,581 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:25,810 | INFO     | job.realtimelogging is not enabled
[2026-02-12 23:27:12] 2026-02-12 22:26:26,816 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 23:27:12] 2026-02-12 22:26:44,937 | INFO     | PID=10085 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 23:27:12] 2026-02-12 22:26:44,937 | INFO     | .. there are 9 such processes running
[2026-02-12 23:27:12] 2026-02-12 22:26:44,938 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 23:27:12] 2026-02-12 22:26:44,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 23:27:12] 2026-02-12 22:26:44,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 23:27:12] 2026-02-12 22:27:01,418 | INFO     | [monitor] cgroup control has ended
[2026-02-12 23:27:12] 2026-02-12 22:27:03,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798568032064)>', '<ExcThread(monitor, started 139798257837824)>']
[2026-02-12 23:27:12] 2026-02-12 22:27:04,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 23:27:12] 2026-02-12 22:27:04,050 | INFO     | [monitor] control thread has ended
[2026-02-12 23:27:12] 2026-02-12 22:27:08,348 | INFO     | all workflow threads have been joined
[2026-02-12 23:27:12] 2026-02-12 22:27:08,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 23:27:12] 2026-02-12 22:27:08,349 | INFO     | traces error code: 0
[2026-02-12 23:27:12] 2026-02-12 22:27:08,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 23:27:12] 2026-02-12 22:27:08,534 [wrapper] ==== pilot stdout END ====
[2026-02-12 23:27:12] 2026-02-12 22:27:08,552 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 23:27:12] 2026-02-12 22:27:08,566 [wrapper] pilotpid: 10085
[2026-02-12 23:27:12] 2026-02-12 22:27:08,581 [wrapper] Pilot exit status: 0
[2026-02-12 23:27:12] 2026-02-12 22:27:08,947 [wrapper] pandaids: 7009001919
[2026-02-12 23:27:12] 2026-02-12 22:27:09,185 [wrapper] supervise_pilot (15 min periods counter: 17)
[2026-02-12 23:27:12] 2026-02-12 22:27:09,866 [wrapper] cleanup supervisor_pilot 13767 10086
[2026-02-12 23:27:12] 2026-02-12 22:27:09,961 [wrapper] Test setup, not cleaning
[2026-02-12 23:27:12] 2026-02-12 22:27:10,007 [wrapper] apfmon messages muted
[2026-02-12 23:27:12] 2026-02-12 22:27:10,080 [wrapper] ==== wrapper stdout END ====
[2026-02-12 23:27:12] 2026-02-12 22:27:10,170 [wrapper] ==== wrapper stderr END ====
[2026-02-12 23:27:12]  *** Error codes and diagnostics ***
[2026-02-12 23:27:12]     "exeErrorCode": 0,
[2026-02-12 23:27:12]     "exeErrorDiag": "",
[2026-02-12 23:27:12]     "pilotErrorCode": 0,
[2026-02-12 23:27:12]     "pilotErrorDiag": "",
[2026-02-12 23:27:12]  *** Listing of results directory ***
[2026-02-12 23:27:12] total 673756
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc    584627 Feb 12 04:03 pilot3.tar.gz
[2026-02-12 23:27:12] -rwx------. 1 boinc boinc     36322 Feb 12 04:04 runpilot2-wrapper.sh
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc      5111 Feb 12 04:05 queuedata.json
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc       100 Feb 12 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 23:27:12] -rwxr-xr-x. 1 boinc boinc      7986 Feb 12 19:23 run_atlas
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc       105 Feb 12 19:23 job.xml
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc      6391 Feb 12 19:23 init_data.xml
[2026-02-12 23:27:12] -rw-r--r--. 2 boinc boinc 501050556 Feb 12 19:23 EVNT.48318032._000301.pool.root.1
[2026-02-12 23:27:12] -rw-r--r--. 2 boinc boinc     15845 Feb 12 19:23 start_atlas.sh
[2026-02-12 23:27:12] drwxrwx--x. 2 boinc boinc        68 Feb 12 19:23 shared
[2026-02-12 23:27:12] -rw-r--r--. 2 boinc boinc    597959 Feb 12 19:23 input.tar.gz
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc         0 Feb 12 19:23 boinc_lockfile
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc      2537 Feb 12 19:23 pandaJob.out
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc       415 Feb 12 19:28 workernode_map.json
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc   1000254 Feb 12 19:28 agis_schedconf.cvmfs.json
[2026-02-12 23:27:12] drwx------. 5 boinc boinc      4096 Feb 12 19:28 pilot3
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc 180036007 Feb 12 23:25 HITS.48318034._017080.pool.root.1
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc       531 Feb 12 23:25 boinc_task_state.xml
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc      1015 Feb 12 23:26 memory_monitor_summary.json
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc   1512955 Feb 12 23:26 agis_ddmendpoints.agis.ALL.json
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc    471707 Feb 12 23:26 log.48318034._017080.job.log.tgz.1
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc      6320 Feb 12 23:26 heartbeat.json
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc        95 Feb 12 23:26 pilot_heartbeat.json
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc      8192 Feb 12 23:27 boinc_mmap_file
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc        28 Feb 12 23:27 wrapper_checkpoint.txt
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc      4952 Feb 12 23:27 pilotlog.txt
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc   1989903 Feb 12 23:27 log.48318034._017080.job.log.1
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc       357 Feb 12 23:27 output.list
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc       620 Feb 12 23:27 runtime_log
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc   2478080 Feb 12 23:27 result.tar.gz
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc      8816 Feb 12 23:27 runtime_log.err
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc       655 Feb 12 23:27 cnSMDmGBcA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqWkKDmkHe3Kn.diag
[2026-02-12 23:27:12] -rw-r--r--. 1 boinc boinc     20664 Feb 12 23:27 stderr.txt
[2026-02-12 23:27:12] HITS file was successfully produced:
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc 180036007 Feb 12 23:25 shared/HITS.pool.root.1
[2026-02-12 23:27:12]  *** Contents of shared directory: ***
[2026-02-12 23:27:12] total 668148
[2026-02-12 23:27:12] -rw-r--r--. 2 boinc boinc 501050556 Feb 12 19:23 ATLAS.root_0
[2026-02-12 23:27:12] -rw-r--r--. 2 boinc boinc     15845 Feb 12 19:23 start_atlas.sh
[2026-02-12 23:27:12] -rw-r--r--. 2 boinc boinc    597959 Feb 12 19:23 input.tar.gz
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc 180036007 Feb 12 23:25 HITS.pool.root.1
[2026-02-12 23:27:12] -rw-------. 1 boinc boinc   2478080 Feb 12 23:27 result.tar.gz
23:27:13 (5999): run_atlas exited; CPU time 52851.175346
23:27:13 (5999): called boinc_finish(0)

</stderr_txt>
]]>

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