Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:19:10 (29972): wrapper (7.7.26015): starting
03:19:10 (29972): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 03:19:10] Arguments: --nthreads 12
[2026-02-12 03:19:10] Threads: 12
[2026-02-12 03:19:10] Checking for CVMFS
[2026-02-12 03:19:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 03:19:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 03:19:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 03:19:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 03:19:10] 2.11.2.0 2945 399753 98280 156145 3 50 18555101 20275200 1 130560 2 173575142 99.948 24178543 17855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 03:19:10] CVMFS is ok
[2026-02-12 03:19:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 03:19:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 03:19:10] Further information can be found at the LHC@home message board.
[2026-02-12 03:19:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 03:19:10] Checking for apptainer binary...
[2026-02-12 03:19:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 03:19:11] Running /usr/bin/apptainer --version
[2026-02-12 03:19:11] apptainer version 1.3.2-1.el7
[2026-02-12 03:19:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 03:19:12] c-205-2.aglt2.org
[2026-02-12 03:19:12] apptainer works
[2026-02-12 03:19:12] Set ATHENA_PROC_NUMBER=12
[2026-02-12 03:19:12] Set ATHENA_CORE_NUMBER=12
[2026-02-12 03:19:12] Starting ATLAS job with PandaID=7009190406
[2026-02-12 03:19:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 04:29:03]  *** The last 200 lines of the pilot log: ***
[2026-02-12 04:29:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 04:29:03]  is_altstaged=None
[2026-02-12 04:29:03]  is_tar=False
[2026-02-12 04:29:03]  lfn=log.48442098._007134.job.log.tgz.1
[2026-02-12 04:29:03]  mtime=0
[2026-02-12 04:29:03]  protocol_id=None
[2026-02-12 04:29:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 04:29:03]  replicas=None
[2026-02-12 04:29:03]  scope=mc23_13p6TeV
[2026-02-12 04:29:03]  status=None
[2026-02-12 04:29:03]  status_code=0
[2026-02-12 04:29:03]  storage_token=
[2026-02-12 04:29:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7009190406/log.48442098._007134.job.log.tgz.1
[2026-02-12 04:29:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/b9/log.48442098._007134.job.log.tgz.1
[2026-02-12 04:29:03]  workdir=None
[2026-02-12 04:29:03] ]
[2026-02-12 04:29:03] 2026-02-12 09:28:29,098 | INFO     | transferring file log.48442098._007134.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7009190406/log.48442098._007134.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-12 04:29:03] 2026-02-12 09:28:29,098 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7009190406/log.48442098._007134.job.log.tgz.1 /tmp/boinchome/slots/0/log.48442098._007134.job
[2026-02-12 04:29:03] 2026-02-12 09:28:29,122 | INFO     | adding to output.list: log.48442098._007134.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/b9/log.48442098._007134.job.log.tg
[2026-02-12 04:29:03] 2026-02-12 09:28:29,123 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 04:29:03] 2026-02-12 09:28:29,123 | INFO     | summary of transferred files:
[2026-02-12 04:29:03] 2026-02-12 09:28:29,123 | INFO     |  -- lfn=log.48442098._007134.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 04:29:03] 2026-02-12 09:28:29,123 | INFO     | stage-out finished correctly
[2026-02-12 04:29:03] 2026-02-12 09:28:30,019 | WARNING  | process 6067 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 04:29:03] 2026-02-12 09:28:30,019 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009190406/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 04:29:03] 2026-02-12 09:28:30,108 | INFO     | number of running child processes to parent process 6067: 1
[2026-02-12 04:29:03] 2026-02-12 09:28:30,109 | INFO     | maximum number of monitored processes: 6
[2026-02-12 04:29:03] 2026-02-12 09:28:30,214 | INFO     | time since job start (4137s) is within the limit (349056.0s)
[2026-02-12 04:29:03] 2026-02-12 09:28:30,214 | INFO     | 4144s have passed since pilot start - server update state is 'RUNNING'
[2026-02-12 04:29:03] 2026-02-12 09:28:31,378 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 04:29:03] 2026-02-12 09:28:31,454 | INFO     | job 7009190406 has state=finished
[2026-02-12 04:29:03] 2026-02-12 09:28:31,454 | INFO     | preparing for final server update for job 7009190406 in state='finished'
[2026-02-12 04:29:03] 2026-02-12 09:28:31,455 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7009190406/jobReport.json
[2026-02-12 04:29:03] 2026-02-12 09:28:31,457 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-12 04:29:03] 2026-02-12 09:28:31,458 | INFO     | this job has now completed (state=finished)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,458 | INFO     | log transfer has been attempted: DONE
[2026-02-12 04:29:03] 2026-02-12 09:28:31,458 | INFO     | job 7009190406 has finished - writing final server update
[2026-02-12 04:29:03] 2026-02-12 09:28:31,459 | INFO     | total number of processed events: 400 (read)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,460 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009190406/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,461 | INFO     | extracted standard info from prmon json
[2026-02-12 04:29:03] 2026-02-12 09:28:31,461 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 04:29:03] 2026-02-12 09:28:31,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 04:29:03] 2026-02-12 09:28:31,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 04:29:03] 2026-02-12 09:28:31,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 04:29:03] 2026-02-12 09:28:31,463 | INFO     | fitting pss+swap vs Time
[2026-02-12 04:29:03] 2026-02-12 09:28:31,463 | INFO     | sum of square deviations: 70364110.0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,463 | INFO     | sum of deviations: 326158704.0000001
[2026-02-12 04:29:03] 2026-02-12 09:28:31,463 | INFO     | mean x: 1770886532.0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | mean y: 2687690.2131147543
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | intersect: -8205901265.266813
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | chi2: 0.01475678672843631
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | current memory leak: 4.64 B/s (using 61 data points, chi2=0.01)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | could have reported an average CPU frequency of 1729 MHz (6 samples)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | ..............................
[2026-02-12 04:29:03] 2026-02-12 09:28:31,464 | INFO     | . Timing measurements:
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . get job = 0 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . initial setup = 7 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . payload setup = 7 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . stage-in = 0 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . payload execution = 4112 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . stage-out = 0 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | . log creation = 0 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,465 | INFO     | ..............................
[2026-02-12 04:29:03] 2026-02-12 09:28:31,540 | INFO     | 
[2026-02-12 04:29:03] 2026-02-12 09:28:31,540 | INFO     | job summary report
[2026-02-12 04:29:03] 2026-02-12 09:28:31,541 | INFO     | --------------------------------------------------
[2026-02-12 04:29:03] 2026-02-12 09:28:31,541 | INFO     | PanDA job id: 7009190406
[2026-02-12 04:29:03] 2026-02-12 09:28:31,541 | INFO     | task id: 48442098
[2026-02-12 04:29:03] 2026-02-12 09:28:31,541 | INFO     | errors: (none)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,541 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 04:29:03] 2026-02-12 09:28:31,541 | INFO     | pilot state: finished 
[2026-02-12 04:29:03] 2026-02-12 09:28:31,542 | INFO     | transexitcode: 0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,542 | INFO     | exeerrorcode: 0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,542 | INFO     | exeerrordiag: 
[2026-02-12 04:29:03] 2026-02-12 09:28:31,542 | INFO     | exitcode: 0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,542 | INFO     | exitmsg: OK
[2026-02-12 04:29:03] 2026-02-12 09:28:31,542 | INFO     | cpuconsumptiontime: 44430 s
[2026-02-12 04:29:03] 2026-02-12 09:28:31,543 | INFO     | nevents: 400
[2026-02-12 04:29:03] 2026-02-12 09:28:31,543 | INFO     | neventsw: 0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,543 | INFO     | pid: 6067
[2026-02-12 04:29:03] 2026-02-12 09:28:31,543 | INFO     | pgrp: 6067
[2026-02-12 04:29:03] 2026-02-12 09:28:31,543 | INFO     | corecount: 12
[2026-02-12 04:29:03] 2026-02-12 09:28:31,543 | INFO     | event service: False
[2026-02-12 04:29:03] 2026-02-12 09:28:31,544 | INFO     | sizes: {0: 2282018, 1: 2282252, 11: 2282252, 4123: 2308116, 4124: 2317114, 4127: 2317492}
[2026-02-12 04:29:03] 2026-02-12 09:28:31,544 | INFO     | --------------------------------------------------
[2026-02-12 04:29:03] 2026-02-12 09:28:31,544 | INFO     | 
[2026-02-12 04:29:03] 2026-02-12 09:28:31,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-12 04:29:03] 2026-02-12 09:28:31,569 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,570 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,570 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,570 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,573 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,573 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 04:29:03] 2026-02-12 09:28:31,573 | INFO     | job 7009190406 has completed (purged errors)
[2026-02-12 04:29:03] 2026-02-12 09:28:31,573 | INFO     | overall cleanup function is called
[2026-02-12 04:29:03] 2026-02-12 09:28:32,582 | INFO     | --- collectZombieJob: --- 10, [6067]
[2026-02-12 04:29:03] 2026-02-12 09:28:32,582 | INFO     | zombie collector waiting for pid 6067
[2026-02-12 04:29:03] 2026-02-12 09:28:32,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 04:29:03] 2026-02-12 09:28:32,589 | INFO     | collected zombie processes
[2026-02-12 04:29:03] 2026-02-12 09:28:32,589 | INFO     | will attempt to kill all subprocesses of pid=6067
[2026-02-12 04:29:03] 2026-02-12 09:28:32,685 | INFO     | process IDs to be killed: [6067] (in reverse order)
[2026-02-12 04:29:03] 2026-02-12 09:28:32,736 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 04:29:03] 2026-02-12 09:28:32,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 04:29:03] 2026-02-12 09:28:32,740 | INFO     | did not find any defunct processes belonging to 6067
[2026-02-12 04:29:03] 2026-02-12 09:28:32,742 | INFO     | did not find any defunct processes belonging to 6067
[2026-02-12 04:29:03] 2026-02-12 09:28:32,742 | INFO     | ready for new job
[2026-02-12 04:29:03] 2026-02-12 09:28:32,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 04:29:03] 2026-02-12 09:28:32,744 | INFO     | **************************************
[2026-02-12 04:29:03] 2026-02-12 09:28:32,744 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 04:29:03] 2026-02-12 09:28:32,744 | INFO     | **************************************
[2026-02-12 04:29:03] 2026-02-12 09:28:32,744 | INFO     | 
[2026-02-12 04:29:03] 2026-02-12 09:28:32,744 | INFO     | architecture information:
[2026-02-12 04:29:03] 2026-02-12 09:28:32,745 | INFO     | executing command: cat /etc/os-release
[2026-02-12 04:29:03] 2026-02-12 09:28:32,761 | INFO     | cat /etc/os-release:
[2026-02-12 04:29:03] NAME="CentOS Linux"
[2026-02-12 04:29:03] VERSION="7 (Core)"
[2026-02-12 04:29:03] ID="centos"
[2026-02-12 04:29:03] ID_LIKE="rhel fedora"
[2026-02-12 04:29:03] VERSION_ID="7"
[2026-02-12 04:29:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 04:29:03] ANSI_COLOR="0;31"
[2026-02-12 04:29:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 04:29:03] HOME_URL="https://www.centos.org/"
[2026-02-12 04:29:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 04:29:03] 
[2026-02-12 04:29:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 04:29:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 04:29:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 04:29:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 04:29:03] 
[2026-02-12 04:29:03] 2026-02-12 09:28:32,761 | INFO     | **************************************
[2026-02-12 04:29:03] 2026-02-12 09:28:33,264 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-12 04:29:03] 2026-02-12 09:28:33,280 | INFO     | sufficient remaining disk space (28858908672 B)
[2026-02-12 04:29:03] 2026-02-12 09:28:33,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 04:29:03] 2026-02-12 09:28:33,281 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 04:29:03] 2026-02-12 09:28:33,281 | INFO     | update_server=False
[2026-02-12 04:29:03] 2026-02-12 09:28:33,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 04:29:03] 2026-02-12 09:28:33,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 04:29:03] 2026-02-12 09:28:33,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:29:03] 2026-02-12 09:28:33,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:29:03] 2026-02-12 09:28:33,617 | INFO     | aborting loop
[2026-02-12 04:29:03] 2026-02-12 09:28:34,272 | INFO     | all payload control threads have been joined
[2026-02-12 04:29:03] 2026-02-12 09:28:34,286 | INFO     | [job] retrieve thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,287 | INFO     | [job] queue monitor thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,295 | INFO     | all data control threads have been joined
[2026-02-12 04:29:03] 2026-02-12 09:28:34,457 | INFO     | all job control threads have been joined
[2026-02-12 04:29:03] 2026-02-12 09:28:34,542 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,623 | INFO     | [job] job monitor thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,649 | INFO     | [data] copytool_in thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,652 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,671 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:34,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 04:29:03] 2026-02-12 09:28:34,803 | INFO     | [payload] failed_post thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:35,278 | INFO     | [payload] control thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:35,296 | INFO     | [data] control thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:35,356 | INFO     | [payload] validate_post thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:35,463 | INFO     | [job] control thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:35,652 | INFO     | [job] validate thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:36,718 | INFO     | [data] copytool_out thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:37,287 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:39,539 | INFO     | [monitor] cgroup control has ended
[2026-02-12 04:29:03] 2026-02-12 09:28:44,204 | INFO     | job.realtimelogging is not enabled
[2026-02-12 04:29:03] 2026-02-12 09:28:45,210 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 04:29:03] 2026-02-12 09:28:46,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139927846422336)>', '<ExcThread(monitor, started 139927266252544)>']
[2026-02-12 04:29:03] 2026-02-12 09:28:51,320 | INFO     | all workflow threads have been joined
[2026-02-12 04:29:03] 2026-02-12 09:28:51,320 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 04:29:03] 2026-02-12 09:28:51,326 | INFO     | traces error code: 0
[2026-02-12 04:29:03] 2026-02-12 09:28:51,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 04:29:03] 2026-02-12 09:29:03,420 | INFO     | PID=1520 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-12 04:29:03] 2026-02-12 09:29:03,420 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 04:29:03] 2026-02-12 09:29:03,420 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 04:29:03] 2026-02-12 09:29:03,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 04:29:03] 2026-02-12 09:29:03,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 04:29:03] 2026-02-12 09:29:03,420 | CRITICAL | thread 'MainThread' is not alive
[2026-02-12 04:29:03] 2026-02-12 09:29:03,421 | INFO     | [monitor] control thread has ended
[2026-02-12 04:29:03] 2026-02-12 09:29:03,504 [wrapper] ==== pilot stdout END ====
[2026-02-12 04:29:03] 2026-02-12 09:29:03,508 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 04:29:03] 2026-02-12 09:29:03,511 [wrapper] pilotpid: 1520
[2026-02-12 04:29:03] 2026-02-12 09:29:03,515 [wrapper] Pilot exit status: 0
[2026-02-12 04:29:03] 2026-02-12 09:29:03,531 [wrapper] pandaids: 7009190406
[2026-02-12 04:29:03] 2026-02-12 09:29:03,573 [wrapper] cleanup supervisor_pilot 24161 1521
[2026-02-12 04:29:03] 2026-02-12 09:29:03,577 [wrapper] Test setup, not cleaning
[2026-02-12 04:29:03] 2026-02-12 09:29:03,581 [wrapper] apfmon messages muted
[2026-02-12 04:29:03] 2026-02-12 09:29:03,585 [wrapper] ==== wrapper stdout END ====
[2026-02-12 04:29:03] 2026-02-12 09:29:03,589 [wrapper] ==== wrapper stderr END ====
[2026-02-12 04:29:03]  *** Error codes and diagnostics ***
[2026-02-12 04:29:03]     "exeErrorCode": 0,
[2026-02-12 04:29:03]     "exeErrorDiag": "",
[2026-02-12 04:29:03]     "pilotErrorCode": 0,
[2026-02-12 04:29:03]     "pilotErrorDiag": "",
[2026-02-12 04:29:03]  *** Listing of results directory ***
[2026-02-12 04:29:03] total 672120
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas    584627 Feb 11 22:00 pilot3.tar.gz
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas      5111 Feb 11 22:01 queuedata.json
[2026-02-12 04:29:03] -rwx------ 1 boincer umatlas     36322 Feb 11 22:01 runpilot2-wrapper.sh
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas       100 Feb 12 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 04:29:03] -rwxr-xr-x 1 boincer umatlas      7986 Feb 12 03:19 run_atlas
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas       105 Feb 12 03:19 job.xml
[2026-02-12 04:29:03] -rw-r--r-- 2 boincer umatlas 497935143 Feb 12 03:19 EVNT.48442096._000126.pool.root.1
[2026-02-12 04:29:03] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 03:19 start_atlas.sh
[2026-02-12 04:29:03] drwxrwx--x 2 boincer umatlas      4096 Feb 12 03:19 shared
[2026-02-12 04:29:03] -rw-r--r-- 2 boincer umatlas    597950 Feb 12 03:19 input.tar.gz
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas         0 Feb 12 03:19 boinc_lockfile
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas      2529 Feb 12 03:19 pandaJob.out
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas        57 Feb 12 03:19 setup.sh.local
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas   1004342 Feb 12 03:19 agis_schedconf.cvmfs.json
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas   1512955 Feb 12 03:19 agis_ddmendpoints.agis.ALL.json
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas       444 Feb 12 03:19 workernode_map.json
[2026-02-12 04:29:03] drwx------ 5 boincer umatlas      4096 Feb 12 03:19 pilot3
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas      5952 Feb 12 04:20 init_data.xml
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas 184325151 Feb 12 04:27 HITS.48442098._007134.pool.root.1
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas        95 Feb 12 04:28 pilot_heartbeat.json
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas       530 Feb 12 04:28 boinc_task_state.xml
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas      1046 Feb 12 04:28 memory_monitor_summary.json
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas    420628 Feb 12 04:28 log.48442098._007134.job.log.tgz.1
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas      6413 Feb 12 04:28 heartbeat.json
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas      8192 Feb 12 04:28 boinc_mmap_file
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas        27 Feb 12 04:28 wrapper_checkpoint.txt
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas       814 Feb 12 04:29 pilotlog.txt
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas    605963 Feb 12 04:29 log.48442098._007134.job.log.1
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas       357 Feb 12 04:29 output.list
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas       620 Feb 12 04:29 runtime_log
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas   1044480 Feb 12 04:29 result.tar.gz
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas       658 Feb 12 04:29 ZiXLDmp8bA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxTlKDmJILJdn.diag
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas      9338 Feb 12 04:29 runtime_log.err
[2026-02-12 04:29:03] -rw-r--r-- 1 boincer umatlas     21389 Feb 12 04:29 stderr.txt
[2026-02-12 04:29:03] HITS file was successfully produced:
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas 184325151 Feb 12 04:27 shared/HITS.pool.root.1
[2026-02-12 04:29:03]  *** Contents of shared directory: ***
[2026-02-12 04:29:03] total 667904
[2026-02-12 04:29:03] -rw-r--r-- 2 boincer umatlas 497935143 Feb 12 03:19 ATLAS.root_0
[2026-02-12 04:29:03] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 03:19 start_atlas.sh
[2026-02-12 04:29:03] -rw-r--r-- 2 boincer umatlas    597950 Feb 12 03:19 input.tar.gz
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas 184325151 Feb 12 04:27 HITS.pool.root.1
[2026-02-12 04:29:03] -rw------- 1 boincer umatlas   1044480 Feb 12 04:29 result.tar.gz
04:29:05 (29972): run_atlas exited; CPU time 44407.322842
04:29:05 (29972): called boinc_finish(0)

</stderr_txt>
]]>

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