Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:58:21 (15494): wrapper (7.7.26015): starting
16:58:21 (15494): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 16:58:21] Arguments: --nthreads 8
[2026-02-12 16:58:21] Threads: 8
[2026-02-12 16:58:21] Checking for CVMFS
[2026-02-12 16:58:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 16:58:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 16:58:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 16:58:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 16:58:26] 2.11.2.0 15872 48708 108364 156160 1 54 19484042 25165825 4780 130560 0 16506284 99.863 10441579 3087 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-12 16:58:26] CVMFS is ok
[2026-02-12 16:58:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 16:58:26] Checking for apptainer binary...
[2026-02-12 16:58:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 16:58:26] Running /usr/bin/apptainer --version
[2026-02-12 16:58:26] apptainer version 1.3.2-1.el7
[2026-02-12 16:58:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 16:58:31] cg-vwn496.simple-grid.lan
[2026-02-12 16:58:31] apptainer works
[2026-02-12 16:58:32] Set ATHENA_PROC_NUMBER=8
[2026-02-12 16:58:32] Set ATHENA_CORE_NUMBER=8
[2026-02-12 16:58:32] Starting ATLAS job with PandaID=7009069528
[2026-02-12 16:58:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 20:48:13]  *** The last 200 lines of the pilot log: ***
[2026-02-12 20:48:13] 2026-02-12 19:47:29,491 | INFO     | job 7009069528 has finished - writing final server update
[2026-02-12 20:48:13] 2026-02-12 19:47:29,492 | INFO     | total number of processed events: 400 (read)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,493 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7009069528/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,494 | INFO     | extracted standard info from prmon json
[2026-02-12 20:48:13] 2026-02-12 19:47:29,494 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 20:48:13] 2026-02-12 19:47:29,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 20:48:13] 2026-02-12 19:47:29,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 20:48:13] 2026-02-12 19:47:29,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 20:48:13] 2026-02-12 19:47:29,499 | INFO     | fitting pss+swap vs Time
[2026-02-12 20:48:13] 2026-02-12 19:47:29,499 | INFO     | sum of square deviations: 3124858590.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,501 | INFO     | sum of deviations: 58479649763.00001
[2026-02-12 20:48:13] 2026-02-12 19:47:29,501 | INFO     | mean x: 1770919027.5
[2026-02-12 20:48:13] 2026-02-12 19:47:29,501 | INFO     | mean y: 2438944.2685185187
[2026-02-12 20:48:13] 2026-02-12 19:47:29,501 | INFO     | intersect: -33139132587.3996
[2026-02-12 20:48:13] 2026-02-12 19:47:29,501 | INFO     | chi2: 6.249217888183068
[2026-02-12 20:48:13] 2026-02-12 19:47:29,502 | INFO     | sum of square deviations: 2912836010.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,504 | INFO     | sum of deviations: 71313031611.99998
[2026-02-12 20:48:13] 2026-02-12 19:47:29,504 | INFO     | mean x: 1770918875.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,504 | INFO     | mean y: 2447979.6966824643
[2026-02-12 20:48:13] 2026-02-12 19:47:29,504 | INFO     | intersect: -43353783981.73202
[2026-02-12 20:48:13] 2026-02-12 19:47:29,504 | INFO     | chi2: 5.519755333049398
[2026-02-12 20:48:13] 2026-02-12 19:47:29,504 | INFO     | current chi2=5.519755333049398 (change=11.672861599417816 %)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,505 | INFO     | right removable region: 210
[2026-02-12 20:48:13] 2026-02-12 19:47:29,505 | INFO     | sum of square deviations: 2912836010.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,507 | INFO     | sum of deviations: -12700428688.999996
[2026-02-12 20:48:13] 2026-02-12 19:47:29,507 | INFO     | mean x: 1770919180.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,507 | INFO     | mean y: 2490083.0568720377
[2026-02-12 20:48:13] 2026-02-12 19:47:29,507 | INFO     | intersect: 7723979615.031021
[2026-02-12 20:48:13] 2026-02-12 19:47:29,508 | INFO     | chi2: 1.8687698329119797
[2026-02-12 20:48:13] 2026-02-12 19:47:29,508 | INFO     | current chi2=1.8687698329119797 (change=70.09594054248417 %)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,508 | INFO     | sum of square deviations: 2710627567.5
[2026-02-12 20:48:13] 2026-02-12 19:47:29,514 | INFO     | sum of deviations: -39222771067.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,514 | INFO     | mean x: 1770919332.5
[2026-02-12 20:48:13] 2026-02-12 19:47:29,514 | INFO     | mean y: 2509897.5533980583
[2026-02-12 20:48:13] 2026-02-12 19:47:29,514 | INFO     | intersect: 25627706213.56185
[2026-02-12 20:48:13] 2026-02-12 19:47:29,515 | INFO     | chi2: 0.9709529559923082
[2026-02-12 20:48:13] 2026-02-12 19:47:29,515 | INFO     | current chi2=0.9709529559923082 (change=48.04320259818531 %)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,515 | INFO     | sum of square deviations: 2518000700.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,517 | INFO     | sum of deviations: -34950534624.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,517 | INFO     | mean x: 1770919485.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,517 | INFO     | mean y: 2506482.8606965174
[2026-02-12 20:48:13] 2026-02-12 19:47:29,517 | INFO     | intersect: 24583350633.066353
[2026-02-12 20:48:13] 2026-02-12 19:47:29,517 | INFO     | chi2: 0.9575017521210978
[2026-02-12 20:48:13] 2026-02-12 19:47:29,518 | INFO     | current chi2=0.9575017521210978 (change=1.3853610299237833 %)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,518 | INFO     | left removable region: 30
[2026-02-12 20:48:13] 2026-02-12 19:47:29,518 | INFO     | sum of square deviations: 1808350185.0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,519 | INFO     | sum of deviations: 934419410.9999993
[2026-02-12 20:48:13] 2026-02-12 19:47:29,519 | INFO     | mean x: 1770919759.5
[2026-02-12 20:48:13] 2026-02-12 19:47:29,520 | INFO     | mean y: 2497593.9777777777
[2026-02-12 20:48:13] 2026-02-12 19:47:29,520 | INFO     | intersect: -912580587.4090042
[2026-02-12 20:48:13] 2026-02-12 19:47:29,520 | INFO     | chi2: 0.027542779684676045
[2026-02-12 20:48:13] 2026-02-12 19:47:29,520 | INFO     | current memory leak: 0.52 B/s (using 180 data points, chi2=0.03)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,521 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,521 | INFO     | ..............................
[2026-02-12 20:48:13] 2026-02-12 19:47:29,521 | INFO     | . Timing measurements:
[2026-02-12 20:48:13] 2026-02-12 19:47:29,521 | INFO     | . get job = 0 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,521 | INFO     | . initial setup = 100 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,521 | INFO     | . payload setup = 134 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,522 | INFO     | . stage-in = 0 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,522 | INFO     | . payload execution = 13283 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,522 | INFO     | . stage-out = 3 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,522 | INFO     | . log creation = 1 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,522 | INFO     | ..............................
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | 
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | job summary report
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | --------------------------------------------------
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | PanDA job id: 7009069528
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | task id: 48442031
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | errors: (none)
[2026-02-12 20:48:13] 2026-02-12 19:47:29,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | pilot state: finished 
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | transexitcode: 0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | exeerrorcode: 0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | exeerrordiag: 
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | exitcode: 0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | exitmsg: OK
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | cpuconsumptiontime: 49250 s
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | nevents: 400
[2026-02-12 20:48:13] 2026-02-12 19:47:29,868 | INFO     | neventsw: 0
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | pid: 24155
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | pgrp: 24155
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | corecount: 8
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | event service: False
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | sizes: {0: 2281690, 1: 2282207, 2: 2282207, 13422: 2312339, 13426: 2321339, 13428: 2321717}
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | --------------------------------------------------
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | 
[2026-02-12 20:48:13] 2026-02-12 19:47:29,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-02-12 20:48:13] 2026-02-12 19:47:30,296 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,296 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,298 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 20:48:13] 2026-02-12 19:47:30,299 | INFO     | job 7009069528 has completed (purged errors)
[2026-02-12 20:48:13] 2026-02-12 19:47:30,299 | INFO     | overall cleanup function is called
[2026-02-12 20:48:13] 2026-02-12 19:47:31,308 | INFO     | --- collectZombieJob: --- 10, [24155]
[2026-02-12 20:48:13] 2026-02-12 19:47:31,308 | INFO     | zombie collector waiting for pid 24155
[2026-02-12 20:48:13] 2026-02-12 19:47:31,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 20:48:13] 2026-02-12 19:47:31,308 | INFO     | collected zombie processes
[2026-02-12 20:48:13] 2026-02-12 19:47:31,308 | INFO     | will attempt to kill all subprocesses of pid=24155
[2026-02-12 20:48:13] 2026-02-12 19:47:31,413 | INFO     | process IDs to be killed: [24155] (in reverse order)
[2026-02-12 20:48:13] 2026-02-12 19:47:32,183 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 20:48:13] 2026-02-12 19:47:32,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 20:48:13] 2026-02-12 19:47:32,187 | INFO     | did not find any defunct processes belonging to 24155
[2026-02-12 20:48:13] 2026-02-12 19:47:32,192 | INFO     | did not find any defunct processes belonging to 24155
[2026-02-12 20:48:13] 2026-02-12 19:47:32,193 | INFO     | ready for new job
[2026-02-12 20:48:13] 2026-02-12 19:47:32,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 20:48:13] 2026-02-12 19:47:32,195 | INFO     | **************************************
[2026-02-12 20:48:13] 2026-02-12 19:47:32,195 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 20:48:13] 2026-02-12 19:47:32,195 | INFO     | **************************************
[2026-02-12 20:48:13] 2026-02-12 19:47:32,195 | INFO     | 
[2026-02-12 20:48:13] 2026-02-12 19:47:32,196 | INFO     | pilot is running in a VM
[2026-02-12 20:48:13] 2026-02-12 19:47:32,196 | INFO     | architecture information:
[2026-02-12 20:48:13] 2026-02-12 19:47:32,203 | INFO     | executing command: cat /etc/os-release
[2026-02-12 20:48:13] 2026-02-12 19:47:32,456 | INFO     | cat /etc/os-release:
[2026-02-12 20:48:13] NAME="CentOS Linux"
[2026-02-12 20:48:13] VERSION="7 (Core)"
[2026-02-12 20:48:13] ID="centos"
[2026-02-12 20:48:13] ID_LIKE="rhel fedora"
[2026-02-12 20:48:13] VERSION_ID="7"
[2026-02-12 20:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 20:48:13] ANSI_COLOR="0;31"
[2026-02-12 20:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 20:48:13] HOME_URL="https://www.centos.org/"
[2026-02-12 20:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 20:48:13] 
[2026-02-12 20:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 20:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 20:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 20:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 20:48:13] 
[2026-02-12 20:48:13] 2026-02-12 19:47:32,456 | INFO     | **************************************
[2026-02-12 20:48:13] 2026-02-12 19:47:32,960 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-02-12 20:48:13] 2026-02-12 19:47:33,187 | INFO     | sufficient remaining disk space (495248736256 B)
[2026-02-12 20:48:13] 2026-02-12 19:47:33,188 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 20:48:13] 2026-02-12 19:47:33,188 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 20:48:13] 2026-02-12 19:47:33,188 | INFO     | update_server=False
[2026-02-12 20:48:13] 2026-02-12 19:47:33,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 20:48:13] 2026-02-12 19:47:33,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 20:48:13] 2026-02-12 19:47:33,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 20:48:13] 2026-02-12 19:47:33,190 | INFO     | aborting loop
[2026-02-12 20:48:13] 2026-02-12 19:47:33,592 | INFO     | all data control threads have been joined
[2026-02-12 20:48:13] 2026-02-12 19:47:33,799 | INFO     | all job control threads have been joined
[2026-02-12 20:48:13] 2026-02-12 19:47:33,921 | INFO     | all payload control threads have been joined
[2026-02-12 20:48:13] 2026-02-12 19:47:34,194 | INFO     | [job] retrieve thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,196 | INFO     | [job] job monitor thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,463 | INFO     | [payload] failed_post thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,548 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,552 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,560 | INFO     | [job] validate thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,598 | INFO     | [data] control thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 20:48:13] 2026-02-12 19:47:34,805 | INFO     | [job] control thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,916 | INFO     | [data] copytool_in thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:34,927 | INFO     | [payload] control thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:35,196 | INFO     | [data] copytool_out thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:35,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 20:48:13] 2026-02-12 19:47:35,394 | INFO     | [payload] validate_post thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:35,621 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:35,670 | INFO     | [job] queue monitor thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:39,307 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:47:43,465 | INFO     | job.realtimelogging is not enabled
[2026-02-12 20:48:13] 2026-02-12 19:47:44,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 20:48:13] 2026-02-12 19:48:02,219 | INFO     | [monitor] cgroup control has ended
[2026-02-12 20:48:13] 2026-02-12 19:48:02,299 | INFO     | PID=19632 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 20:48:13] 2026-02-12 19:48:02,299 | INFO     | .. there are 9 such processes running
[2026-02-12 20:48:13] 2026-02-12 19:48:02,300 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 20:48:13] 2026-02-12 19:48:02,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 20:48:13] 2026-02-12 19:48:02,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 20:48:13] 2026-02-12 19:48:02,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761522890560)>', '<ExcThread(monitor, started 139761222137600)>']
[2026-02-12 20:48:13] 2026-02-12 19:48:03,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 20:48:13] 2026-02-12 19:48:03,306 | INFO     | [monitor] control thread has ended
[2026-02-12 20:48:13] 2026-02-12 19:48:07,843 | INFO     | all workflow threads have been joined
[2026-02-12 20:48:13] 2026-02-12 19:48:07,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 20:48:13] 2026-02-12 19:48:07,843 | INFO     | traces error code: 0
[2026-02-12 20:48:13] 2026-02-12 19:48:07,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 20:48:13] 2026-02-12 19:48:08,118 [wrapper] ==== pilot stdout END ====
[2026-02-12 20:48:13] 2026-02-12 19:48:08,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 20:48:13] 2026-02-12 19:48:08,309 [wrapper] pilotpid: 19632
[2026-02-12 20:48:13] 2026-02-12 19:48:08,390 [wrapper] Pilot exit status: 0
[2026-02-12 20:48:13] 2026-02-12 19:48:08,963 [wrapper] pandaids: 7009069528
[2026-02-12 20:48:13] 2026-02-12 19:48:10,021 [wrapper] cleanup supervisor_pilot 31115 19633
[2026-02-12 20:48:13] 2026-02-12 19:48:10,182 [wrapper] Test setup, not cleaning
[2026-02-12 20:48:13] 2026-02-12 19:48:10,307 [wrapper] apfmon messages muted
[2026-02-12 20:48:13] 2026-02-12 19:48:10,430 [wrapper] ==== wrapper stdout END ====
[2026-02-12 20:48:13] 2026-02-12 19:48:10,535 [wrapper] ==== wrapper stderr END ====
[2026-02-12 20:48:13]  *** Error codes and diagnostics ***
[2026-02-12 20:48:13]     "exeErrorCode": 0,
[2026-02-12 20:48:13]     "exeErrorDiag": "",
[2026-02-12 20:48:13]     "pilotErrorCode": 0,
[2026-02-12 20:48:13]     "pilotErrorDiag": "",
[2026-02-12 20:48:13]  *** Listing of results directory ***
[2026-02-12 20:48:13] total 665460
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc      5111 Feb 12 04:00 queuedata.json
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc    584627 Feb 12 04:00 pilot3.tar.gz
[2026-02-12 20:48:13] -rwx------. 1 boinc boinc     36322 Feb 12 04:00 runpilot2-wrapper.sh
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc       100 Feb 12 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 20:48:13] -rwxr-xr-x. 1 boinc boinc      7986 Feb 12 16:58 run_atlas
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc       105 Feb 12 16:58 job.xml
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc      6392 Feb 12 16:58 init_data.xml
[2026-02-12 20:48:13] -rw-r--r--. 2 boinc boinc 495573852 Feb 12 16:58 EVNT.48442027._000205.pool.root.1
[2026-02-12 20:48:13] -rw-r--r--. 2 boinc boinc     15845 Feb 12 16:58 start_atlas.sh
[2026-02-12 20:48:13] drwxrwx--x. 2 boinc boinc        68 Feb 12 16:58 shared
[2026-02-12 20:48:13] -rw-r--r--. 2 boinc boinc    597954 Feb 12 16:58 input.tar.gz
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc         0 Feb 12 16:58 boinc_lockfile
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc      2531 Feb 12 16:58 pandaJob.out
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc       415 Feb 12 17:03 workernode_map.json
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc    999474 Feb 12 17:03 agis_schedconf.cvmfs.json
[2026-02-12 20:48:13] drwx------. 5 boinc boinc      4096 Feb 12 17:03 pilot3
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc 177209037 Feb 12 20:46 HITS.48442031._010651.pool.root.1
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc       531 Feb 12 20:46 boinc_task_state.xml
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc      1014 Feb 12 20:47 memory_monitor_summary.json
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc   1512955 Feb 12 20:47 agis_ddmendpoints.agis.ALL.json
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc    481557 Feb 12 20:47 log.48442031._010651.job.log.tgz.1
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc      6323 Feb 12 20:47 heartbeat.json
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc        95 Feb 12 20:48 pilot_heartbeat.json
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc      4953 Feb 12 20:48 pilotlog.txt
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc   1882133 Feb 12 20:48 log.48442031._010651.job.log.1
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc       357 Feb 12 20:48 output.list
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc      8192 Feb 12 20:48 boinc_mmap_file
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc       620 Feb 12 20:48 runtime_log
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc   2385920 Feb 12 20:48 result.tar.gz
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc        28 Feb 12 20:48 wrapper_checkpoint.txt
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc      8832 Feb 12 20:48 runtime_log.err
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc       656 Feb 12 20:48 jrIKDms7bA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNSlKDmJofYbn.diag
[2026-02-12 20:48:13] -rw-r--r--. 1 boinc boinc     20681 Feb 12 20:48 stderr.txt
[2026-02-12 20:48:13] HITS file was successfully produced:
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc 177209037 Feb 12 20:46 shared/HITS.pool.root.1
[2026-02-12 20:48:13]  *** Contents of shared directory: ***
[2026-02-12 20:48:13] total 659948
[2026-02-12 20:48:13] -rw-r--r--. 2 boinc boinc 495573852 Feb 12 16:58 ATLAS.root_0
[2026-02-12 20:48:13] -rw-r--r--. 2 boinc boinc     15845 Feb 12 16:58 start_atlas.sh
[2026-02-12 20:48:13] -rw-r--r--. 2 boinc boinc    597954 Feb 12 16:58 input.tar.gz
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc 177209037 Feb 12 20:46 HITS.pool.root.1
[2026-02-12 20:48:13] -rw-------. 1 boinc boinc   2385920 Feb 12 20:48 result.tar.gz
20:48:14 (15494): run_atlas exited; CPU time 49443.900115
20:48:14 (15494): called boinc_finish(0)

</stderr_txt>
]]>

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