Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:27:35 (2559313): wrapper (7.7.26015): starting
14:27:35 (2559313): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 14:27:35] Arguments: --nthreads 12
[2026-02-12 14:27:35] Threads: 12
[2026-02-12 14:27:35] Checking for CVMFS
[2026-02-12 14:27:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 14:27:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 14:27:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 14:27:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 14:27:36] 2.13.3.0 50993 7159 81040 156157 2 49 3304066 4097024 922 130560 0 5364034 99.991 233835 17560 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-02-12 14:27:36] CVMFS is ok
[2026-02-12 14:27:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 14:27:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 14:27:36] Further information can be found at the LHC@home message board.
[2026-02-12 14:27:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 14:27:36] Checking for apptainer binary...
[2026-02-12 14:27:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 14:27:36] Running /usr/bin/apptainer --version
[2026-02-12 14:27:36] apptainer version 1.4.5-2.el9
[2026-02-12 14:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 14:27:36] pckelar1.cern.ch
[2026-02-12 14:27:36] apptainer works
[2026-02-12 14:27:36] Set ATHENA_PROC_NUMBER=12
[2026-02-12 14:27:36] Set ATHENA_CORE_NUMBER=12
[2026-02-12 14:27:36] Starting ATLAS job with PandaID=7000511817
[2026-02-12 14:27:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:06:05 (4969): wrapper (7.7.26015): starting
15:06:06 (4969): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 15:06:06] Arguments: --nthreads 12
[2026-02-12 15:06:06] Threads: 12
[2026-02-12 15:06:06] This job has been restarted, cleaning up previous attempt
[2026-02-12 15:06:06] Checking for CVMFS
[2026-02-12 15:06:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 15:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 15:06:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 15:06:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 15:06:08] 2.13.3.0 5712 0 29516 156157 3 1 3308330 4097024 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-02-12 15:06:08] CVMFS is ok
[2026-02-12 15:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 15:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 15:06:08] Further information can be found at the LHC@home message board.
[2026-02-12 15:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 15:06:08] Checking for apptainer binary...
[2026-02-12 15:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 15:06:08] Running /usr/bin/apptainer --version
[2026-02-12 15:06:09] apptainer version 1.4.5-2.el9
[2026-02-12 15:06:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 15:06:09] pckelar1.cern.ch
[2026-02-12 15:06:09] apptainer works
[2026-02-12 15:06:09] Set ATHENA_PROC_NUMBER=12
[2026-02-12 15:06:09] Set ATHENA_CORE_NUMBER=12
[2026-02-12 15:06:10] Starting ATLAS job with PandaID=7000511817
[2026-02-12 15:06:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 17:08:46]  *** The last 200 lines of the pilot log: ***
[2026-02-12 17:08:46] 2026-02-12 16:08:26,476 | INFO     | log transfer has been attempted: DONE
[2026-02-12 17:08:46] 2026-02-12 16:08:26,476 | INFO     | job 7000511817 has finished - writing final server update
[2026-02-12 17:08:46] 2026-02-12 16:08:26,477 | INFO     | total number of processed events: 400 (read)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,482 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7000511817/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,483 | INFO     | extracted standard info from prmon json
[2026-02-12 17:08:46] 2026-02-12 16:08:26,483 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 17:08:46] 2026-02-12 16:08:26,483 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 17:08:46] 2026-02-12 16:08:26,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 17:08:46] 2026-02-12 16:08:26,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 17:08:46] 2026-02-12 16:08:26,487 | INFO     | fitting pss+swap vs Time
[2026-02-12 17:08:46] 2026-02-12 16:08:26,488 | INFO     | sum of square deviations: 535786790.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,489 | INFO     | sum of deviations: 22230733524.5
[2026-02-12 17:08:46] 2026-02-12 16:08:26,489 | INFO     | mean x: 1770908842.5
[2026-02-12 17:08:46] 2026-02-12 16:08:26,489 | INFO     | mean y: 2663271.825
[2026-02-12 17:08:46] 2026-02-12 16:08:26,489 | INFO     | intersect: -73475450240.0782
[2026-02-12 17:08:46] 2026-02-12 16:08:26,490 | INFO     | chi2: 1.4344324479198332
[2026-02-12 17:08:46] 2026-02-12 16:08:26,490 | INFO     | sum of square deviations: 471562330.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,491 | INFO     | sum of deviations: 20885652811.000004
[2026-02-12 17:08:46] 2026-02-12 16:08:26,491 | INFO     | mean x: 1770908690.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,491 | INFO     | mean y: 2660095.947826087
[2026-02-12 17:08:46] 2026-02-12 16:08:26,491 | INFO     | intersect: -78431476191.66199
[2026-02-12 17:08:46] 2026-02-12 16:08:26,492 | INFO     | chi2: 1.4359887983592226
[2026-02-12 17:08:46] 2026-02-12 16:08:26,492 | INFO     | current chi2=1.4359887983592226 (change=-0.10849938884513984 %)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,492 | INFO     | right removable region: 114
[2026-02-12 17:08:46] 2026-02-12 16:08:26,492 | INFO     | sum of square deviations: 471562330.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,493 | INFO     | sum of deviations: 2290747579.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,493 | INFO     | mean x: 1770908995.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,494 | INFO     | mean y: 2709807.3130434784
[2026-02-12 17:08:46] 2026-02-12 16:08:26,494 | INFO     | intersect: -8599982212.054943
[2026-02-12 17:08:46] 2026-02-12 16:08:26,494 | INFO     | chi2: 0.009517693233115609
[2026-02-12 17:08:46] 2026-02-12 16:08:26,494 | INFO     | current chi2=0.009517693233115609 (change=99.33648369102931 %)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,495 | INFO     | sum of square deviations: 412686807.5
[2026-02-12 17:08:46] 2026-02-12 16:08:26,495 | INFO     | sum of deviations: 3194268141.5
[2026-02-12 17:08:46] 2026-02-12 16:08:26,496 | INFO     | mean x: 1770909147.5
[2026-02-12 17:08:46] 2026-02-12 16:08:26,496 | INFO     | mean y: 2707531.7181818183
[2026-02-12 17:08:46] 2026-02-12 16:08:26,496 | INFO     | intersect: -13704439313.168964
[2026-02-12 17:08:46] 2026-02-12 16:08:26,496 | INFO     | chi2: 0.0011668517899080296
[2026-02-12 17:08:46] 2026-02-12 16:08:26,496 | INFO     | current chi2=0.0011668517899080296 (change=87.74018282236587 %)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,497 | INFO     | sum of square deviations: 358927660.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,497 | INFO     | sum of deviations: 2474839173.9999995
[2026-02-12 17:08:46] 2026-02-12 16:08:26,498 | INFO     | mean x: 1770909300.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,498 | INFO     | mean y: 2709571.0476190476
[2026-02-12 17:08:46] 2026-02-12 16:08:26,498 | INFO     | intersect: -12207872665.052317
[2026-02-12 17:08:46] 2026-02-12 16:08:26,498 | INFO     | chi2: 0.0008925356712452654
[2026-02-12 17:08:46] 2026-02-12 16:08:26,498 | INFO     | current chi2=0.0008925356712452654 (change=23.509079819330406 %)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,499 | INFO     | left removable region: 30
[2026-02-12 17:08:46] 2026-02-12 16:08:26,499 | INFO     | sum of square deviations: 183761585.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,500 | INFO     | sum of deviations: 1022046338.0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,500 | INFO     | mean x: 1770909574.5
[2026-02-12 17:08:46] 2026-02-12 16:08:26,500 | INFO     | mean y: 2711897.8333333335
[2026-02-12 17:08:46] 2026-02-12 16:08:26,500 | INFO     | intersect: -9846744099.985052
[2026-02-12 17:08:46] 2026-02-12 16:08:26,500 | INFO     | chi2: 0.0002907937182482564
[2026-02-12 17:08:46] 2026-02-12 16:08:26,501 | INFO     | current memory leak: 5.56 B/s (using 84 data points, chi2=0.00)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,501 | INFO     | could have reported an average CPU frequency of 2825 MHz (8 samples)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,501 | INFO     | ..............................
[2026-02-12 17:08:46] 2026-02-12 16:08:26,501 | INFO     | . Timing measurements:
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . get job = 0 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . initial setup = 2 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . payload setup = 11 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . stage-in = 0 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . payload execution = 7288 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . stage-out = 1 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,502 | INFO     | . log creation = 0 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,503 | INFO     | ..............................
[2026-02-12 17:08:46] 2026-02-12 16:08:26,618 | INFO     | time since job start (7320s) is within the limit (349056.0s)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,652 | INFO     | 
[2026-02-12 17:08:46] 2026-02-12 16:08:26,653 | INFO     | job summary report
[2026-02-12 17:08:46] 2026-02-12 16:08:26,653 | INFO     | --------------------------------------------------
[2026-02-12 17:08:46] 2026-02-12 16:08:26,653 | INFO     | PanDA job id: 7000511817
[2026-02-12 17:08:46] 2026-02-12 16:08:26,653 | INFO     | task id: 48317952
[2026-02-12 17:08:46] 2026-02-12 16:08:26,653 | INFO     | errors: (none)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,653 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 17:08:46] 2026-02-12 16:08:26,654 | INFO     | pilot state: finished 
[2026-02-12 17:08:46] 2026-02-12 16:08:26,654 | INFO     | transexitcode: 0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,654 | INFO     | exeerrorcode: 0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,654 | INFO     | exeerrordiag: 
[2026-02-12 17:08:46] 2026-02-12 16:08:26,654 | INFO     | exitcode: 0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,654 | INFO     | exitmsg: OK
[2026-02-12 17:08:46] 2026-02-12 16:08:26,655 | INFO     | cpuconsumptiontime: 81223 s
[2026-02-12 17:08:46] 2026-02-12 16:08:26,655 | INFO     | nevents: 400
[2026-02-12 17:08:46] 2026-02-12 16:08:26,655 | INFO     | neventsw: 0
[2026-02-12 17:08:46] 2026-02-12 16:08:26,655 | INFO     | pid: 21034
[2026-02-12 17:08:46] 2026-02-12 16:08:26,655 | INFO     | pgrp: 21034
[2026-02-12 17:08:46] 2026-02-12 16:08:26,655 | INFO     | corecount: 12
[2026-02-12 17:08:46] 2026-02-12 16:08:26,656 | INFO     | event service: False
[2026-02-12 17:08:46] 2026-02-12 16:08:26,656 | INFO     | sizes: {0: 2282013, 1: 2282219, 11: 2282247, 7303: 2309558, 7305: 2318556, 7308: 2318612, 7309: 2318934}
[2026-02-12 17:08:46] 2026-02-12 16:08:26,656 | INFO     | --------------------------------------------------
[2026-02-12 17:08:46] 2026-02-12 16:08:26,656 | INFO     | 
[2026-02-12 17:08:46] 2026-02-12 16:08:26,656 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-02-12 17:08:46] 2026-02-12 16:08:26,673 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,674 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,674 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,674 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 17:08:46] 2026-02-12 16:08:26,677 | INFO     | job 7000511817 has completed (purged errors)
[2026-02-12 17:08:46] 2026-02-12 16:08:26,677 | INFO     | overall cleanup function is called
[2026-02-12 17:08:46] 2026-02-12 16:08:27,684 | INFO     | --- collectZombieJob: --- 10, [21034]
[2026-02-12 17:08:46] 2026-02-12 16:08:27,685 | INFO     | zombie collector waiting for pid 21034
[2026-02-12 17:08:46] 2026-02-12 16:08:27,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 17:08:46] 2026-02-12 16:08:27,685 | INFO     | collected zombie processes
[2026-02-12 17:08:46] 2026-02-12 16:08:27,685 | INFO     | will attempt to kill all subprocesses of pid=21034
[2026-02-12 17:08:46] 2026-02-12 16:08:27,870 | INFO     | process IDs to be killed: [21034] (in reverse order)
[2026-02-12 17:08:46] 2026-02-12 16:08:27,926 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 17:08:46] 2026-02-12 16:08:27,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 17:08:46] 2026-02-12 16:08:27,934 | INFO     | did not find any defunct processes belonging to 21034
[2026-02-12 17:08:46] 2026-02-12 16:08:27,940 | INFO     | did not find any defunct processes belonging to 21034
[2026-02-12 17:08:46] 2026-02-12 16:08:27,940 | INFO     | ready for new job
[2026-02-12 17:08:46] 2026-02-12 16:08:27,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 17:08:46] 2026-02-12 16:08:27,943 | INFO     | **************************************
[2026-02-12 17:08:46] 2026-02-12 16:08:27,943 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-12 17:08:46] 2026-02-12 16:08:27,943 | INFO     | **************************************
[2026-02-12 17:08:46] 2026-02-12 16:08:27,943 | INFO     | 
[2026-02-12 17:08:46] 2026-02-12 16:08:27,945 | INFO     | architecture information:
[2026-02-12 17:08:46] 2026-02-12 16:08:27,945 | INFO     | executing command: cat /etc/os-release
[2026-02-12 17:08:46] 2026-02-12 16:08:27,960 | INFO     | cat /etc/os-release:
[2026-02-12 17:08:46] NAME="CentOS Linux"
[2026-02-12 17:08:46] VERSION="7 (Core)"
[2026-02-12 17:08:46] ID="centos"
[2026-02-12 17:08:46] ID_LIKE="rhel fedora"
[2026-02-12 17:08:46] VERSION_ID="7"
[2026-02-12 17:08:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 17:08:46] ANSI_COLOR="0;31"
[2026-02-12 17:08:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 17:08:46] HOME_URL="https://www.centos.org/"
[2026-02-12 17:08:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 17:08:46] 
[2026-02-12 17:08:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 17:08:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 17:08:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 17:08:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 17:08:46] 
[2026-02-12 17:08:46] 2026-02-12 16:08:27,961 | INFO     | **************************************
[2026-02-12 17:08:46] 2026-02-12 16:08:28,463 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-02-12 17:08:46] 2026-02-12 16:08:28,477 | INFO     | sufficient remaining disk space (775860256768 B)
[2026-02-12 17:08:46] 2026-02-12 16:08:28,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 17:08:46] 2026-02-12 16:08:28,478 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 17:08:46] 2026-02-12 16:08:28,478 | INFO     | update_server=False
[2026-02-12 17:08:46] 2026-02-12 16:08:28,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 17:08:46] 2026-02-12 16:08:28,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 17:08:46] 2026-02-12 16:08:28,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 17:08:46] 2026-02-12 16:08:28,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 17:08:46] 2026-02-12 16:08:28,479 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-12 17:08:46] 2026-02-12 16:08:28,480 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 17:08:46] 2026-02-12 16:08:28,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 17:08:46] 2026-02-12 16:08:28,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 17:08:46] 2026-02-12 16:08:28,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 17:08:46] 2026-02-12 16:08:28,566 | INFO     | aborting loop
[2026-02-12 17:08:46] 2026-02-12 16:08:29,072 | INFO     | all data control threads have been joined
[2026-02-12 17:08:46] 2026-02-12 16:08:29,207 | INFO     | all payload control threads have been joined
[2026-02-12 17:08:46] 2026-02-12 16:08:29,373 | INFO     | all job control threads have been joined
[2026-02-12 17:08:46] 2026-02-12 16:08:29,483 | INFO     | [job] retrieve thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:29,485 | INFO     | [job] queue monitor thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:29,571 | INFO     | [job] job monitor thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:29,578 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:29,965 | INFO     | [payload] validate_post thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,076 | INFO     | [data] control thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,130 | INFO     | [payload] failed_post thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,210 | INFO     | [payload] control thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,379 | INFO     | [job] control thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,469 | INFO     | [data] copytool_in thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,486 | INFO     | [data] copytool_out thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,768 | INFO     | [job] validate thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,812 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:30,974 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:32,485 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:37,969 | INFO     | [monitor] cgroup control has ended
[2026-02-12 17:08:46] 2026-02-12 16:08:38,826 | INFO     | job.realtimelogging is not enabled
[2026-02-12 17:08:46] 2026-02-12 16:08:39,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 17:08:46] 2026-02-12 16:08:41,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287992604480)>', '<ExcThread(monitor, started 140287607281408)>']
[2026-02-12 17:08:46] 2026-02-12 16:08:41,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 17:08:46] 2026-02-12 16:08:41,546 | INFO     | [monitor] control thread has ended
[2026-02-12 17:08:46] 2026-02-12 16:08:46,236 | INFO     | all workflow threads have been joined
[2026-02-12 17:08:46] 2026-02-12 16:08:46,237 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 17:08:46] 2026-02-12 16:08:46,237 | INFO     | traces error code: 0
[2026-02-12 17:08:46] 2026-02-12 16:08:46,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 17:08:46] 2026-02-12 16:08:46,357 [wrapper] ==== pilot stdout END ====
[2026-02-12 17:08:46] 2026-02-12 16:08:46,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 17:08:46] 2026-02-12 16:08:46,363 [wrapper] pilotpid: 14566
[2026-02-12 17:08:46] 2026-02-12 16:08:46,365 [wrapper] Pilot exit status: 0
[2026-02-12 17:08:46] 2026-02-12 16:08:46,376 [wrapper] pandaids: 7000511817 7000511817
[2026-02-12 17:08:46] 2026-02-12 16:08:46,413 [wrapper] cleanup supervisor_pilot   41588 14568
[2026-02-12 17:08:46] 2026-02-12 16:08:46,415 [wrapper] Test setup, not cleaning
[2026-02-12 17:08:46] 2026-02-12 16:08:46,418 [wrapper] apfmon messages muted
[2026-02-12 17:08:46] 2026-02-12 16:08:46,421 [wrapper] ==== wrapper stdout END ====
[2026-02-12 17:08:46] 2026-02-12 16:08:46,424 [wrapper] ==== wrapper stderr END ====
[2026-02-12 17:08:46]  *** Error codes and diagnostics ***
[2026-02-12 17:08:46]     "exeErrorCode": 0,
[2026-02-12 17:08:46]     "exeErrorDiag": "",
[2026-02-12 17:08:46]     "pilotErrorCode": 0,
[2026-02-12 17:08:46]     "pilotErrorDiag": "",
[2026-02-12 17:08:46]  *** Listing of results directory ***
[2026-02-12 17:08:46] total 1172776
[2026-02-12 17:08:46] drwx------ 5 boinc boinc      4096 Jan 14 11:00 pilot3
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-12 17:08:46] -rwx------ 1 boinc boinc     36322 Feb  4 00:45 runpilot2-wrapper.sh
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc      5111 Feb  4 00:47 queuedata.json
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc       100 Feb 12 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 17:08:46] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 14:27 run_atlas
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc       105 Feb 12 14:27 job.xml
[2026-02-12 17:08:46] -rw-r--r-- 3 boinc boinc 505642778 Feb 12 14:27 EVNT.48317949._000213.pool.root.1
[2026-02-12 17:08:46] -rw-r--r-- 3 boinc boinc 505642778 Feb 12 14:27 ATLAS.root_0
[2026-02-12 17:08:46] -rw-r--r-- 2 boinc boinc     15845 Feb 12 14:27 start_atlas.sh
[2026-02-12 17:08:46] drwxrwx--x 2 boinc boinc        68 Feb 12 14:27 shared
[2026-02-12 17:08:46] -rw-r--r-- 2 boinc boinc    597765 Feb 12 14:27 input.tar.gz
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc         0 Feb 12 14:27 boinc_lockfile
[2026-02-12 17:08:46] -rw------- 1 boinc boinc   1512955 Feb 12 14:27 agis_ddmendpoints.agis.ALL.json
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc      2523 Feb 12 15:06 pandaJob.out
[2026-02-12 17:08:46] -rw------- 1 boinc boinc   1000167 Feb 12 15:06 agis_schedconf.cvmfs.json
[2026-02-12 17:08:46] -rw------- 1 boinc boinc       437 Feb 12 15:06 workernode_map.json
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc      6304 Feb 12 15:28 init_data.xml
[2026-02-12 17:08:46] -rw------- 1 boinc boinc 182740525 Feb 12 17:07 HITS.48317952._011321.pool.root.1
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc       532 Feb 12 17:07 boinc_task_state.xml
[2026-02-12 17:08:46] -rw------- 1 boinc boinc        96 Feb 12 17:08 pilot_heartbeat.json
[2026-02-12 17:08:46] -rw------- 1 boinc boinc      1036 Feb 12 17:08 memory_monitor_summary.json
[2026-02-12 17:08:46] -rw------- 1 boinc boinc    430473 Feb 12 17:08 log.48317952._011321.job.log.tgz.1
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc      8192 Feb 12 17:08 boinc_mmap_file
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc        28 Feb 12 17:08 wrapper_checkpoint.txt
[2026-02-12 17:08:46] -rw------- 1 boinc boinc      6383 Feb 12 17:08 heartbeat.json
[2026-02-12 17:08:46] -rw------- 1 boinc boinc      4621 Feb 12 17:08 pilotlog.txt
[2026-02-12 17:08:46] -rw------- 1 boinc boinc   1059575 Feb 12 17:08 log.48317952._011321.job.log.1
[2026-02-12 17:08:46] -rw------- 1 boinc boinc       357 Feb 12 17:08 output.list
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc       620 Feb 12 17:08 runtime_log
[2026-02-12 17:08:46] -rw------- 1 boinc boinc   1505280 Feb 12 17:08 result.tar.gz
[2026-02-12 17:08:46] -rw------- 1 boinc boinc       789 Feb 12 17:08 WTONDm2Ff78n9Rq4apOajLDm4fhM0noT9bVooX4SDmcrVKDmf9WEWn.diag
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc      8925 Feb 12 17:08 runtime_log.err
[2026-02-12 17:08:46] -rw-r--r-- 1 boinc boinc     23044 Feb 12 17:08 stderr.txt
[2026-02-12 17:08:46] HITS file was successfully produced:
[2026-02-12 17:08:46] -rw------- 1 boinc boinc 182740525 Feb 12 17:07 shared/HITS.pool.root.1
[2026-02-12 17:08:46]  *** Contents of shared directory: ***
[2026-02-12 17:08:46] total 674324
[2026-02-12 17:08:46] -rw-r--r-- 3 boinc boinc 505642778 Feb 12 14:27 ATLAS.root_0
[2026-02-12 17:08:46] -rw-r--r-- 2 boinc boinc     15845 Feb 12 14:27 start_atlas.sh
[2026-02-12 17:08:46] -rw-r--r-- 2 boinc boinc    597765 Feb 12 14:27 input.tar.gz
[2026-02-12 17:08:46] -rw------- 1 boinc boinc 182740525 Feb 12 17:07 HITS.pool.root.1
[2026-02-12 17:08:46] -rw------- 1 boinc boinc   1505280 Feb 12 17:08 result.tar.gz
17:08:48 (4969): run_atlas exited; CPU time 81358.992225
17:08:48 (4969): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN