Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:50:28 (3191994): wrapper (7.7.26015): starting
18:50:28 (3191994): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 18:50:28] Arguments: --nthreads 12
[2026-02-12 18:50:28] Threads: 12
[2026-02-12 18:50:28] Checking for CVMFS
[2026-02-12 18:50:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 18:50:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 18:50:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 18:50:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 18:50:29] 2.12.7.0 5265 4539 75472 156175 2 188 3996089 4194304 1825 130560 0 6492392 99.995 147662 137 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-12 18:50:29] CVMFS is ok
[2026-02-12 18:50:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 18:50:29] Checking for apptainer binary...
[2026-02-12 18:50:29] apptainer is not installed, using version from CVMFS
[2026-02-12 18:50:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 18:50:29] Trebeth
[2026-02-12 18:50:29] apptainer works
[2026-02-12 18:50:29] Set ATHENA_PROC_NUMBER=12
[2026-02-12 18:50:29] Set ATHENA_CORE_NUMBER=12
[2026-02-12 18:50:29] Starting ATLAS job with PandaID=7009001398
[2026-02-12 18:50:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 20:24:20]  *** The last 200 lines of the pilot log: ***
[2026-02-12 20:24:20] ]
[2026-02-12 20:24:20] 2026-02-13 01:23:44,352 | INFO     | transferring file log.48431113._011597.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/log.48431113._011597.job.log.tgz.1 to /var/lib/boinc
[2026-02-12 20:24:20] 2026-02-13 01:23:44,352 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/log.48431113._011597.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.484311
[2026-02-12 20:24:20] 2026-02-13 01:23:44,363 | INFO     | adding to output.list: log.48431113._011597.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/77/log.48431113._011597.job.log.tg
[2026-02-12 20:24:20] 2026-02-13 01:23:44,364 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 20:24:20] 2026-02-13 01:23:44,364 | INFO     | summary of transferred files:
[2026-02-12 20:24:20] 2026-02-13 01:23:44,364 | INFO     |  -- lfn=log.48431113._011597.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 20:24:20] 2026-02-13 01:23:44,365 | INFO     | stage-out finished correctly
[2026-02-12 20:24:20] 2026-02-13 01:23:44,446 | WARNING  | process 3200990 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 20:24:20] 2026-02-13 01:23:44,446 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,446 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,447 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-12 20:24:20] 2026-02-13 01:23:44,447 | WARNING  | maxPSS not found in memory monitor output
[2026-02-12 20:24:20] 2026-02-13 01:23:44,447 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4161915 B
[2026-02-12 20:24:20] 2026-02-13 01:23:44,447 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16578 B
[2026-02-12 20:24:20] 2026-02-13 01:23:44,447 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-02-12 20:24:20] 2026-02-13 01:23:44,464 | INFO     | sufficient remaining disk space (370558369792 B)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,464 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,465 | INFO     | size of work directory /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398: 4466117 B (within 5033164800 B limit)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,465 | INFO     | pfn file=/var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/HITS.48431113._011597.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,466 | INFO     | total size of present files: 0 B (workdir size: 4466117 B)
[2026-02-12 20:24:20] 2026-02-13 01:23:44,466 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/HITS.48431113._011597.pool.root.1 since it does not exist
[2026-02-12 20:24:20] 2026-02-13 01:23:44,611 | INFO     | number of running child processes to parent process 3200990: 1
[2026-02-12 20:24:20] 2026-02-13 01:23:44,611 | INFO     | maximum number of monitored processes: 6
[2026-02-12 20:24:20] 2026-02-13 01:23:45,058 | INFO     | time since job start (5583s) is within the limit (349056.0s)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,062 | INFO     | time since job start (5585s) is within the limit (349056.0s)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,114 | INFO     | monitor loop #419: job 0:7009001398 is in state 'finished'
[2026-02-12 20:24:20] 2026-02-13 01:23:47,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,487 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 20:24:20] 2026-02-13 01:23:47,534 | INFO     | job 7009001398 has state=finished
[2026-02-12 20:24:20] 2026-02-13 01:23:47,534 | INFO     | preparing for final server update for job 7009001398 in state='finished'
[2026-02-12 20:24:20] 2026-02-13 01:23:47,535 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/jobReport.json
[2026-02-12 20:24:20] 2026-02-13 01:23:47,538 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-02-12 20:24:20] 2026-02-13 01:23:47,539 | INFO     | this job has now completed (state=finished)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,539 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,539 | INFO     | log transfer has been attempted: DONE
[2026-02-12 20:24:20] 2026-02-13 01:23:47,539 | INFO     | job 7009001398 has finished - writing final server update
[2026-02-12 20:24:20] 2026-02-13 01:23:47,540 | INFO     | total number of processed events: 400 (read)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,567 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7009001398/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,568 | INFO     | extracted standard info from prmon json
[2026-02-12 20:24:20] 2026-02-13 01:23:47,568 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 20:24:20] 2026-02-13 01:23:47,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 20:24:20] 2026-02-13 01:23:47,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 20:24:20] 2026-02-13 01:23:47,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 20:24:20] 2026-02-13 01:23:47,571 | INFO     | fitting pss+swap vs Time
[2026-02-12 20:24:20] 2026-02-13 01:23:47,572 | INFO     | sum of square deviations: 190403570.0
[2026-02-12 20:24:20] 2026-02-13 01:23:47,572 | INFO     | sum of deviations: 4046490204.9999995
[2026-02-12 20:24:20] 2026-02-13 01:23:47,572 | INFO     | mean x: 1770943128.0
[2026-02-12 20:24:20] 2026-02-13 01:23:47,572 | INFO     | mean y: 2744036.4823529413
[2026-02-12 20:24:20] 2026-02-13 01:23:47,572 | INFO     | intersect: -37633651232.07306
[2026-02-12 20:24:20] 2026-02-13 01:23:47,573 | INFO     | chi2: 0.23074271118261702
[2026-02-12 20:24:20] 2026-02-13 01:23:47,573 | INFO     | current memory leak: 21.25 B/s (using 85 data points, chi2=0.23)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,573 | INFO     | could have reported an average CPU frequency of 2751 MHz (7 samples)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,573 | INFO     | ..............................
[2026-02-12 20:24:20] 2026-02-13 01:23:47,573 | INFO     | . Timing measurements:
[2026-02-12 20:24:20] 2026-02-13 01:23:47,573 | INFO     | . get job = 0 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | . initial setup = 5 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | . payload setup = 4 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | . stage-in = 0 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | . payload execution = 5562 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | . stage-out = 0 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | . log creation = 0 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,574 | INFO     | ..............................
[2026-02-12 20:24:20] 2026-02-13 01:23:47,625 | INFO     | 
[2026-02-12 20:24:20] 2026-02-13 01:23:47,625 | INFO     | job summary report
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | --------------------------------------------------
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | PanDA job id: 7009001398
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | task id: 48431113
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | errors: (none)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | pilot state: finished 
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | transexitcode: 0
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | exeerrorcode: 0
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | exeerrordiag: 
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | exitcode: 0
[2026-02-12 20:24:20] 2026-02-13 01:23:47,626 | INFO     | exitmsg: OK
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | cpuconsumptiontime: 58315 s
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | nevents: 400
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | neventsw: 0
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | pid: 3200990
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | pgrp: 3200990
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | corecount: 12
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | event service: False
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | sizes: {0: 2281881, 1: 2282285, 11: 2282285, 5570: 2308940, 5571: 2317952, 5574: 2318358}
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | --------------------------------------------------
[2026-02-12 20:24:20] 2026-02-13 01:23:47,627 | INFO     | 
[2026-02-12 20:24:20] 2026-02-13 01:23:47,628 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-02-12 20:24:20] 2026-02-13 01:23:47,645 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,648 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,648 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 20:24:20] 2026-02-13 01:23:47,648 | INFO     | job 7009001398 has completed (purged errors)
[2026-02-12 20:24:20] 2026-02-13 01:23:47,648 | INFO     | overall cleanup function is called
[2026-02-12 20:24:20] 2026-02-13 01:23:48,657 | INFO     | --- collectZombieJob: --- 10, [3200990]
[2026-02-12 20:24:20] 2026-02-13 01:23:48,657 | INFO     | zombie collector waiting for pid 3200990
[2026-02-12 20:24:20] 2026-02-13 01:23:48,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 20:24:20] 2026-02-13 01:23:48,658 | INFO     | collected zombie processes
[2026-02-12 20:24:20] 2026-02-13 01:23:48,658 | INFO     | will attempt to kill all subprocesses of pid=3200990
[2026-02-12 20:24:20] 2026-02-13 01:23:48,785 | INFO     | process IDs to be killed: [3200990] (in reverse order)
[2026-02-12 20:24:20] 2026-02-13 01:23:48,833 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 20:24:20] 2026-02-13 01:23:48,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 20:24:20] 2026-02-13 01:23:48,837 | INFO     | did not find any defunct processes belonging to 3200990
[2026-02-12 20:24:20] 2026-02-13 01:23:48,840 | INFO     | did not find any defunct processes belonging to 3200990
[2026-02-12 20:24:20] 2026-02-13 01:23:48,840 | INFO     | ready for new job
[2026-02-12 20:24:20] 2026-02-13 01:23:48,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 20:24:20] 2026-02-13 01:23:48,842 | INFO     | **************************************
[2026-02-12 20:24:20] 2026-02-13 01:23:48,842 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 20:24:20] 2026-02-13 01:23:48,842 | INFO     | **************************************
[2026-02-12 20:24:20] 2026-02-13 01:23:48,842 | INFO     | 
[2026-02-12 20:24:20] 2026-02-13 01:23:48,866 | INFO     | architecture information:
[2026-02-12 20:24:20] 2026-02-13 01:23:48,867 | INFO     | executing command: cat /etc/os-release
[2026-02-12 20:24:20] 2026-02-13 01:23:48,880 | INFO     | cat /etc/os-release:
[2026-02-12 20:24:20] NAME="CentOS Linux"
[2026-02-12 20:24:20] VERSION="7 (Core)"
[2026-02-12 20:24:20] ID="centos"
[2026-02-12 20:24:20] ID_LIKE="rhel fedora"
[2026-02-12 20:24:20] VERSION_ID="7"
[2026-02-12 20:24:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 20:24:20] ANSI_COLOR="0;31"
[2026-02-12 20:24:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 20:24:20] HOME_URL="https://www.centos.org/"
[2026-02-12 20:24:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 20:24:20] 
[2026-02-12 20:24:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 20:24:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 20:24:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 20:24:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 20:24:20] 
[2026-02-12 20:24:20] 2026-02-13 01:23:48,880 | INFO     | **************************************
[2026-02-12 20:24:20] 2026-02-13 01:23:49,382 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-02-12 20:24:20] 2026-02-13 01:23:49,394 | INFO     | sufficient remaining disk space (370563612672 B)
[2026-02-12 20:24:20] 2026-02-13 01:23:49,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 20:24:20] 2026-02-13 01:23:49,395 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 20:24:20] 2026-02-13 01:23:49,395 | INFO     | update_server=False
[2026-02-12 20:24:20] 2026-02-13 01:23:49,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 20:24:20] 2026-02-13 01:23:49,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 20:24:20] 2026-02-13 01:23:49,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 20:24:20] 2026-02-13 01:23:49,433 | INFO     | all data control threads have been joined
[2026-02-12 20:24:20] 2026-02-13 01:23:49,618 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-12 20:24:20] 2026-02-13 01:23:49,618 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-12 20:24:20] 2026-02-13 01:23:49,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 20:24:20] 2026-02-13 01:23:49,618 | INFO     | will abort loop
[2026-02-12 20:24:20] 2026-02-13 01:23:49,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 20:24:20] 2026-02-13 01:23:50,250 | INFO     | all job control threads have been joined
[2026-02-12 20:24:20] 2026-02-13 01:23:50,398 | INFO     | [job] retrieve thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,399 | INFO     | [job] queue monitor thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,434 | INFO     | [data] control thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,450 | INFO     | [payload] failed_post thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,470 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,624 | INFO     | [job] job monitor thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,806 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,815 | INFO     | [data] copytool_in thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:50,818 | INFO     | all payload control threads have been joined
[2026-02-12 20:24:20] 2026-02-13 01:23:51,135 | INFO     | [monitor] cgroup control has ended
[2026-02-12 20:24:20] 2026-02-13 01:23:51,224 | INFO     | [payload] validate_post thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:51,256 | INFO     | [job] control thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:51,306 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:51,542 | INFO     | [job] validate thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:51,822 | INFO     | [payload] control thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:51,823 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:51,922 | INFO     | [data] copytool_out thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:53,401 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 20:24:20] 2026-02-13 01:23:54,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314034181952)>', '<ExcThread(monitor, started 140313586804480)>']
[2026-02-12 20:24:20] 2026-02-13 01:23:59,402 | INFO     | all workflow threads have been joined
[2026-02-12 20:24:20] 2026-02-13 01:23:59,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 20:24:20] 2026-02-13 01:23:59,403 | INFO     | traces error code: 0
[2026-02-12 20:24:20] 2026-02-13 01:23:59,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 20:24:20] 2026-02-13 01:24:20,331 | INFO     | PID=3196178 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 20:24:20] 2026-02-13 01:24:20,331 | INFO     | .. there are 3 such processes running
[2026-02-12 20:24:20] 2026-02-13 01:24:20,332 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 20:24:20] 2026-02-13 01:24:20,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 20:24:20] 2026-02-13 01:24:20,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 20:24:20] 2026-02-13 01:24:20,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 20:24:20] 2026-02-13 01:24:20,332 | INFO     | [monitor] control thread has ended
[2026-02-12 20:24:20] 2026-02-13 01:24:20,400 [wrapper] ==== pilot stdout END ====
[2026-02-12 20:24:20] 2026-02-13 01:24:20,402 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 20:24:20] 2026-02-13 01:24:20,405 [wrapper] pilotpid: 3196178
[2026-02-12 20:24:20] 2026-02-13 01:24:20,406 [wrapper] Pilot exit status: 0
[2026-02-12 20:24:20] 2026-02-13 01:24:20,414 [wrapper] pandaids: 7009001398
[2026-02-12 20:24:20] 2026-02-13 01:24:20,444 [wrapper] cleanup supervisor_pilot 3238321 3196179
[2026-02-12 20:24:20] 2026-02-13 01:24:20,446 [wrapper] Test setup, not cleaning
[2026-02-12 20:24:20] 2026-02-13 01:24:20,449 [wrapper] apfmon messages muted
[2026-02-12 20:24:20] 2026-02-13 01:24:20,451 [wrapper] ==== wrapper stdout END ====
[2026-02-12 20:24:20] 2026-02-13 01:24:20,453 [wrapper] ==== wrapper stderr END ====
[2026-02-12 20:24:20]  *** Error codes and diagnostics ***
[2026-02-12 20:24:20]     "exeErrorCode": 0,
[2026-02-12 20:24:20]     "exeErrorDiag": "",
[2026-02-12 20:24:20]     "pilotErrorCode": 0,
[2026-02-12 20:24:20]     "pilotErrorDiag": "",
[2026-02-12 20:24:20]  *** Listing of results directory ***
[2026-02-12 20:24:20] total 895828
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc    584627 Feb 11 19:45 pilot3.tar.gz
[2026-02-12 20:24:20] -rwx------ 1 boinc boinc     36322 Feb 11 19:50 runpilot2-wrapper.sh
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc      5111 Feb 11 19:53 queuedata.json
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc       100 Feb 12 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 20:24:20] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 18:50 run_atlas
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc       105 Feb 12 18:50 job.xml
[2026-02-12 20:24:20] -rw-r--r-- 2 boinc boinc     15845 Feb 12 18:50 start_atlas.sh
[2026-02-12 20:24:20] drwxrwx--x 2 boinc boinc      4096 Feb 12 18:50 shared
[2026-02-12 20:24:20] -rw-r--r-- 2 boinc boinc    597951 Feb 12 18:50 input.tar.gz
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc      7579 Feb 12 18:50 init_data.xml
[2026-02-12 20:24:20] -rw-r--r-- 2 boinc boinc 656018568 Feb 12 18:50 EVNT.48431111._000224.pool.root.1
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc         0 Feb 12 18:50 boinc_lockfile
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc      2546 Feb 12 18:50 pandaJob.out
[2026-02-12 20:24:20] -rw------- 1 boinc boinc        50 Feb 12 18:50 setup.sh.local
[2026-02-12 20:24:20] -rw------- 1 boinc boinc   1000254 Feb 12 18:50 agis_schedconf.cvmfs.json
[2026-02-12 20:24:20] -rw------- 1 boinc boinc   1512955 Feb 12 18:50 agis_ddmendpoints.agis.ALL.json
[2026-02-12 20:24:20] -rw------- 1 boinc boinc       430 Feb 12 18:50 workernode_map.json
[2026-02-12 20:24:20] drwx------ 5 boinc boinc      4096 Feb 12 18:50 pilot3
[2026-02-12 20:24:20] -rw------- 1 boinc boinc 254928518 Feb 12 20:23 HITS.48431113._011597.pool.root.1
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc       530 Feb 12 20:23 boinc_task_state.xml
[2026-02-12 20:24:20] -rw------- 1 boinc boinc      1027 Feb 12 20:23 memory_monitor_summary.json
[2026-02-12 20:24:20] -rw------- 1 boinc boinc    398868 Feb 12 20:23 log.48431113._011597.job.log.tgz.1
[2026-02-12 20:24:20] -rw------- 1 boinc boinc      6334 Feb 12 20:23 heartbeat.json
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc        27 Feb 12 20:24 wrapper_checkpoint.txt
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc      8192 Feb 12 20:24 boinc_mmap_file
[2026-02-12 20:24:20] -rw------- 1 boinc boinc       822 Feb 12 20:24 pilotlog.txt
[2026-02-12 20:24:20] -rw------- 1 boinc boinc        95 Feb 12 20:24 pilot_heartbeat.json
[2026-02-12 20:24:20] -rw------- 1 boinc boinc    826426 Feb 12 20:24 log.48431113._011597.job.log.1
[2026-02-12 20:24:20] -rw------- 1 boinc boinc       357 Feb 12 20:24 output.list
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc       620 Feb 12 20:24 runtime_log
[2026-02-12 20:24:20] -rw------- 1 boinc boinc   1239040 Feb 12 20:24 result.tar.gz
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc      9403 Feb 12 20:24 runtime_log.err
[2026-02-12 20:24:20] -rw------- 1 boinc boinc       650 Feb 12 20:24 iIgKDmH5ZA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmRkKDm2TWiEn.diag
[2026-02-12 20:24:20] -rw-r--r-- 1 boinc boinc     22453 Feb 12 20:24 stderr.txt
[2026-02-12 20:24:20] HITS file was successfully produced:
[2026-02-12 20:24:20] -rw------- 1 boinc boinc 254928518 Feb 12 20:23 shared/HITS.pool.root.1
[2026-02-12 20:24:20]  *** Contents of shared directory: ***
[2026-02-12 20:24:20] total 891420
[2026-02-12 20:24:20] -rw-r--r-- 2 boinc boinc     15845 Feb 12 18:50 start_atlas.sh
[2026-02-12 20:24:20] -rw-r--r-- 2 boinc boinc    597951 Feb 12 18:50 input.tar.gz
[2026-02-12 20:24:20] -rw-r--r-- 2 boinc boinc 656018568 Feb 12 18:50 ATLAS.root_0
[2026-02-12 20:24:20] -rw------- 1 boinc boinc 254928518 Feb 12 20:23 HITS.pool.root.1
[2026-02-12 20:24:20] -rw------- 1 boinc boinc   1239040 Feb 12 20:24 result.tar.gz
20:24:22 (3191994): run_atlas exited; CPU time 58425.995667
20:24:22 (3191994): called boinc_finish(0)

</stderr_txt>
]]>

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