Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:43:56 (3176780): wrapper (7.7.26015): starting
18:43:56 (3176780): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 18:43:56] Arguments: --nthreads 12
[2026-02-12 18:43:56] Threads: 12
[2026-02-12 18:43:56] Checking for CVMFS
[2026-02-12 18:43:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 18:43:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 18:43:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 18:43:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 18:43:57] 2.12.7.0 5265 4532 75004 156175 0 50 3994162 4194304 1834 130560 0 6453797 99.995 147593 137 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-12 18:43:57] CVMFS is ok
[2026-02-12 18:43:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 18:43:57] Checking for apptainer binary...
[2026-02-12 18:43:57] apptainer is not installed, using version from CVMFS
[2026-02-12 18:43:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 18:43:57] Trebeth
[2026-02-12 18:43:57] apptainer works
[2026-02-12 18:43:57] Set ATHENA_PROC_NUMBER=12
[2026-02-12 18:43:57] Set ATHENA_CORE_NUMBER=12
[2026-02-12 18:43:57] Starting ATLAS job with PandaID=7012955732
[2026-02-12 18:43:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 20:20:28]  *** The last 200 lines of the pilot log: ***
[2026-02-12 20:20:28]  lfn=log.48431096._034587.job.log.tgz.1
[2026-02-12 20:20:28]  mtime=0
[2026-02-12 20:20:28]  protocol_id=None
[2026-02-12 20:20:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 20:20:28]  replicas=None
[2026-02-12 20:20:28]  scope=mc23_13p6TeV
[2026-02-12 20:20:28]  status=None
[2026-02-12 20:20:28]  status_code=0
[2026-02-12 20:20:28]  storage_token=
[2026-02-12 20:20:28]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-7012955732/log.48431096._034587.job.log.tgz.1
[2026-02-12 20:20:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/89/log.48431096._034587.job.log.tgz.1
[2026-02-12 20:20:28]  workdir=None
[2026-02-12 20:20:28] ]
[2026-02-12 20:20:28] 2026-02-13 01:19:31,383 | INFO     | transferring file log.48431096._034587.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955732/log.48431096._034587.job.log.tgz.1 to /var/lib/boinc
[2026-02-12 20:20:28] 2026-02-13 01:19:31,384 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955732/log.48431096._034587.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.484310
[2026-02-12 20:20:28] 2026-02-13 01:19:31,401 | INFO     | adding to output.list: log.48431096._034587.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/89/log.48431096._034587.job.log.tg
[2026-02-12 20:20:28] 2026-02-13 01:19:31,402 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 20:20:28] 2026-02-13 01:19:31,402 | INFO     | summary of transferred files:
[2026-02-12 20:20:28] 2026-02-13 01:19:31,402 | INFO     |  -- lfn=log.48431096._034587.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 20:20:28] 2026-02-13 01:19:31,402 | INFO     | stage-out finished correctly
[2026-02-12 20:20:28] 2026-02-13 01:19:31,620 | WARNING  | process 3185992 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 20:20:28] 2026-02-13 01:19:31,620 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955732/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 20:20:28] 2026-02-13 01:19:31,754 | INFO     | number of running child processes to parent process 3185992: 1
[2026-02-12 20:20:28] 2026-02-13 01:19:31,754 | INFO     | maximum number of monitored processes: 6
[2026-02-12 20:20:28] 2026-02-13 01:19:32,563 | INFO     | time since job start (5718s) is within the limit (349056.0s)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,261 | INFO     | monitor loop #429: job 0:7012955732 is in state 'finished'
[2026-02-12 20:20:28] 2026-02-13 01:19:34,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,326 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 20:20:28] 2026-02-13 01:19:34,566 | INFO     | time since job start (5720s) is within the limit (349056.0s)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,567 | INFO     | 5726s have passed since pilot start - server update state is 'RUNNING'
[2026-02-12 20:20:28] 2026-02-13 01:19:34,803 | INFO     | job 7012955732 has state=finished
[2026-02-12 20:20:28] 2026-02-13 01:19:34,803 | INFO     | preparing for final server update for job 7012955732 in state='finished'
[2026-02-12 20:20:28] 2026-02-13 01:19:34,803 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955732/jobReport.json
[2026-02-12 20:20:28] 2026-02-13 01:19:34,806 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-02-12 20:20:28] 2026-02-13 01:19:34,806 | INFO     | this job has now completed (state=finished)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,806 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,806 | INFO     | log transfer has been attempted: DONE
[2026-02-12 20:20:28] 2026-02-13 01:19:34,806 | INFO     | job 7012955732 has finished - writing final server update
[2026-02-12 20:20:28] 2026-02-13 01:19:34,807 | INFO     | total number of processed events: 400 (read)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,835 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955732/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,836 | INFO     | extracted standard info from prmon json
[2026-02-12 20:20:28] 2026-02-13 01:19:34,836 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 20:20:28] 2026-02-13 01:19:34,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 20:20:28] 2026-02-13 01:19:34,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 20:20:28] 2026-02-13 01:19:34,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 20:20:28] 2026-02-13 01:19:34,839 | INFO     | fitting pss+swap vs Time
[2026-02-12 20:20:28] 2026-02-13 01:19:34,839 | INFO     | sum of square deviations: 204163828.0
[2026-02-12 20:20:28] 2026-02-13 01:19:34,839 | INFO     | sum of deviations: -3503377681.0000005
[2026-02-12 20:20:28] 2026-02-13 01:19:34,839 | INFO     | mean x: 1770942801.0
[2026-02-12 20:20:28] 2026-02-13 01:19:34,840 | INFO     | mean y: 2783198.4827586208
[2026-02-12 20:20:28] 2026-02-13 01:19:34,840 | INFO     | intersect: 30391523183.075058
[2026-02-12 20:20:28] 2026-02-13 01:19:34,840 | INFO     | chi2: 0.12403900510336498
[2026-02-12 20:20:28] 2026-02-13 01:19:34,840 | INFO     | current memory leak: -17.16 B/s (using 87 data points, chi2=0.12)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,840 | INFO     | could have reported an average CPU frequency of 2938 MHz (7 samples)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | ..............................
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . Timing measurements:
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . get job = 0 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . initial setup = 5 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . payload setup = 4 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . stage-in = 0 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . payload execution = 5697 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . stage-out = 0 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | . log creation = 0 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,841 | INFO     | ..............................
[2026-02-12 20:20:28] 2026-02-13 01:19:34,927 | INFO     | 
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | job summary report
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | --------------------------------------------------
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | PanDA job id: 7012955732
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | task id: 48431096
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | errors: (none)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | pilot state: finished 
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | transexitcode: 0
[2026-02-12 20:20:28] 2026-02-13 01:19:34,928 | INFO     | exeerrorcode: 0
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | exeerrordiag: 
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | exitcode: 0
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | exitmsg: OK
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | cpuconsumptiontime: 61074 s
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | nevents: 400
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | neventsw: 0
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | pid: 3185992
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | pgrp: 3185992
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | corecount: 12
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | event service: False
[2026-02-12 20:20:28] 2026-02-13 01:19:34,929 | INFO     | sizes: {0: 2281958, 1: 2282220, 11: 2282248, 5705: 2308961, 5706: 2317973, 5709: 2318351}
[2026-02-12 20:20:28] 2026-02-13 01:19:34,930 | INFO     | --------------------------------------------------
[2026-02-12 20:20:28] 2026-02-13 01:19:34,930 | INFO     | 
[2026-02-12 20:20:28] 2026-02-13 01:19:34,930 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-02-12 20:20:28] 2026-02-13 01:19:34,951 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,951 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,951 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,951 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | job 7012955732 has completed (purged errors)
[2026-02-12 20:20:28] 2026-02-13 01:19:34,953 | INFO     | overall cleanup function is called
[2026-02-12 20:20:28] 2026-02-13 01:19:35,958 | INFO     | --- collectZombieJob: --- 10, [3185992]
[2026-02-12 20:20:28] 2026-02-13 01:19:35,958 | INFO     | zombie collector waiting for pid 3185992
[2026-02-12 20:20:28] 2026-02-13 01:19:35,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 20:20:28] 2026-02-13 01:19:35,959 | INFO     | collected zombie processes
[2026-02-12 20:20:28] 2026-02-13 01:19:35,959 | INFO     | will attempt to kill all subprocesses of pid=3185992
[2026-02-12 20:20:28] 2026-02-13 01:19:36,187 | INFO     | process IDs to be killed: [3185992] (in reverse order)
[2026-02-12 20:20:28] 2026-02-13 01:19:36,250 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 20:20:28] 2026-02-13 01:19:36,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 20:20:28] 2026-02-13 01:19:36,257 | INFO     | did not find any defunct processes belonging to 3185992
[2026-02-12 20:20:28] 2026-02-13 01:19:36,262 | INFO     | did not find any defunct processes belonging to 3185992
[2026-02-12 20:20:28] 2026-02-13 01:19:36,262 | INFO     | ready for new job
[2026-02-12 20:20:28] 2026-02-13 01:19:36,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 20:20:28] 2026-02-13 01:19:36,264 | INFO     | **************************************
[2026-02-12 20:20:28] 2026-02-13 01:19:36,264 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 20:20:28] 2026-02-13 01:19:36,265 | INFO     | **************************************
[2026-02-12 20:20:28] 2026-02-13 01:19:36,265 | INFO     | 
[2026-02-12 20:20:28] 2026-02-13 01:19:36,285 | INFO     | architecture information:
[2026-02-12 20:20:28] 2026-02-13 01:19:36,286 | INFO     | executing command: cat /etc/os-release
[2026-02-12 20:20:28] 2026-02-13 01:19:36,299 | INFO     | cat /etc/os-release:
[2026-02-12 20:20:28] NAME="CentOS Linux"
[2026-02-12 20:20:28] VERSION="7 (Core)"
[2026-02-12 20:20:28] ID="centos"
[2026-02-12 20:20:28] ID_LIKE="rhel fedora"
[2026-02-12 20:20:28] VERSION_ID="7"
[2026-02-12 20:20:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 20:20:28] ANSI_COLOR="0;31"
[2026-02-12 20:20:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 20:20:28] HOME_URL="https://www.centos.org/"
[2026-02-12 20:20:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 20:20:28] 
[2026-02-12 20:20:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 20:20:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 20:20:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 20:20:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 20:20:28] 
[2026-02-12 20:20:28] 2026-02-13 01:19:36,299 | INFO     | **************************************
[2026-02-12 20:20:28] 2026-02-13 01:19:36,802 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-02-12 20:20:28] 2026-02-13 01:19:36,817 | INFO     | sufficient remaining disk space (370416812032 B)
[2026-02-12 20:20:28] 2026-02-13 01:19:36,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 20:20:28] 2026-02-13 01:19:36,818 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 20:20:28] 2026-02-13 01:19:36,818 | INFO     | update_server=False
[2026-02-12 20:20:28] 2026-02-13 01:19:36,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 20:20:28] 2026-02-13 01:19:36,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 20:20:28] 2026-02-13 01:19:36,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 20:20:28] 2026-02-13 01:19:36,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 20:20:28] 2026-02-13 01:19:37,030 | INFO     | all data control threads have been joined
[2026-02-12 20:20:28] 2026-02-13 01:19:37,146 | INFO     | job.realtimelogging is not enabled
[2026-02-12 20:20:28] 2026-02-13 01:19:37,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 20:20:28] 2026-02-13 01:19:37,766 | INFO     | aborting loop
[2026-02-12 20:20:28] 2026-02-13 01:19:37,823 | INFO     | [job] retrieve thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:37,824 | INFO     | [job] queue monitor thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:37,892 | INFO     | all payload control threads have been joined
[2026-02-12 20:20:28] 2026-02-13 01:19:38,034 | INFO     | [data] control thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,306 | INFO     | [payload] failed_post thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,454 | INFO     | all job control threads have been joined
[2026-02-12 20:20:28] 2026-02-13 01:19:38,770 | INFO     | [job] job monitor thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,798 | INFO     | [job] validate thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,838 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,898 | INFO     | [payload] control thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,995 | INFO     | [data] copytool_out thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:38,998 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:39,278 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:39,322 | INFO     | [data] copytool_in thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:39,414 | INFO     | [payload] validate_post thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:39,458 | INFO     | [job] control thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:19:40,822 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 20:20:28] 2026-02-13 01:20:07,844 | INFO     | PID=3181186 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 20:20:28] 2026-02-13 01:20:07,844 | INFO     | .. there are 3 such processes running
[2026-02-12 20:20:28] 2026-02-13 01:20:07,844 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 20:20:28] 2026-02-13 01:20:07,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 20:20:28] 2026-02-13 01:20:07,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 20:20:28] 2026-02-13 01:20:23,274 | INFO     | [monitor] cgroup control has ended
[2026-02-12 20:20:28] 2026-02-13 01:20:23,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139767894869824)>', '<ExcThread(monitor, started 139767446476544)>']
[2026-02-12 20:20:28] 2026-02-13 01:20:23,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 20:20:28] 2026-02-13 01:20:23,903 | INFO     | [monitor] control thread has ended
[2026-02-12 20:20:28] 2026-02-13 01:20:28,582 | INFO     | all workflow threads have been joined
[2026-02-12 20:20:28] 2026-02-13 01:20:28,583 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 20:20:28] 2026-02-13 01:20:28,583 | INFO     | traces error code: 0
[2026-02-12 20:20:28] 2026-02-13 01:20:28,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 20:20:28] 2026-02-13 01:20:28,699 [wrapper] ==== pilot stdout END ====
[2026-02-12 20:20:28] 2026-02-13 01:20:28,702 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 20:20:28] 2026-02-13 01:20:28,704 [wrapper] pilotpid: 3181186
[2026-02-12 20:20:28] 2026-02-13 01:20:28,706 [wrapper] Pilot exit status: 0
[2026-02-12 20:20:28] 2026-02-13 01:20:28,713 [wrapper] pandaids: 7012955732
[2026-02-12 20:20:28] 2026-02-13 01:20:28,754 [wrapper] cleanup supervisor_pilot 3236743 3181187
[2026-02-12 20:20:28] 2026-02-13 01:20:28,757 [wrapper] Test setup, not cleaning
[2026-02-12 20:20:28] 2026-02-13 01:20:28,759 [wrapper] apfmon messages muted
[2026-02-12 20:20:28] 2026-02-13 01:20:28,761 [wrapper] ==== wrapper stdout END ====
[2026-02-12 20:20:28] 2026-02-13 01:20:28,763 [wrapper] ==== wrapper stderr END ====
[2026-02-12 20:20:28]  *** Error codes and diagnostics ***
[2026-02-12 20:20:28]     "exeErrorCode": 0,
[2026-02-12 20:20:28]     "exeErrorDiag": "",
[2026-02-12 20:20:28]     "pilotErrorCode": 0,
[2026-02-12 20:20:28]     "pilotErrorDiag": "",
[2026-02-12 20:20:28]  *** Listing of results directory ***
[2026-02-12 20:20:28] total 954564
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc    584627 Feb 11 19:45 pilot3.tar.gz
[2026-02-12 20:20:28] -rwx------ 1 boinc boinc     36322 Feb 11 19:48 runpilot2-wrapper.sh
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc      5111 Feb 11 19:49 queuedata.json
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc       100 Feb 12 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 20:20:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 18:43 run_atlas
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc       105 Feb 12 18:43 job.xml
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc      7579 Feb 12 18:43 init_data.xml
[2026-02-12 20:20:28] -rw-r--r-- 2 boinc boinc 688477243 Feb 12 18:43 EVNT.48431094._000150.pool.root.1
[2026-02-12 20:20:28] -rw-r--r-- 2 boinc boinc     15845 Feb 12 18:43 start_atlas.sh
[2026-02-12 20:20:28] drwxrwx--x 2 boinc boinc      4096 Feb 12 18:43 shared
[2026-02-12 20:20:28] -rw-r--r-- 2 boinc boinc    597958 Feb 12 18:43 input.tar.gz
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc         0 Feb 12 18:43 boinc_lockfile
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc      2555 Feb 12 18:43 pandaJob.out
[2026-02-12 20:20:28] -rw------- 1 boinc boinc        50 Feb 12 18:43 setup.sh.local
[2026-02-12 20:20:28] -rw------- 1 boinc boinc   1000254 Feb 12 18:44 agis_schedconf.cvmfs.json
[2026-02-12 20:20:28] -rw------- 1 boinc boinc   1512955 Feb 12 18:44 agis_ddmendpoints.agis.ALL.json
[2026-02-12 20:20:28] -rw------- 1 boinc boinc       429 Feb 12 18:44 workernode_map.json
[2026-02-12 20:20:28] drwx------ 5 boinc boinc      4096 Feb 12 18:44 pilot3
[2026-02-12 20:20:28] -rw------- 1 boinc boinc 282593886 Feb 12 20:18 HITS.48431096._034587.pool.root.1
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc       530 Feb 12 20:18 boinc_task_state.xml
[2026-02-12 20:20:28] -rw------- 1 boinc boinc      1027 Feb 12 20:19 memory_monitor_summary.json
[2026-02-12 20:20:28] -rw------- 1 boinc boinc        95 Feb 12 20:19 pilot_heartbeat.json
[2026-02-12 20:20:28] -rw------- 1 boinc boinc    392903 Feb 12 20:19 log.48431096._034587.job.log.tgz.1
[2026-02-12 20:20:28] -rw------- 1 boinc boinc      6334 Feb 12 20:19 heartbeat.json
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc        27 Feb 12 20:20 wrapper_checkpoint.txt
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc      8192 Feb 12 20:20 boinc_mmap_file
[2026-02-12 20:20:28] -rw------- 1 boinc boinc      4899 Feb 12 20:20 pilotlog.txt
[2026-02-12 20:20:28] -rw------- 1 boinc boinc    843338 Feb 12 20:20 log.48431096._034587.job.log.1
[2026-02-12 20:20:28] -rw------- 1 boinc boinc       357 Feb 12 20:20 output.list
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc       620 Feb 12 20:20 runtime_log
[2026-02-12 20:20:28] -rw------- 1 boinc boinc   1249280 Feb 12 20:20 result.tar.gz
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc      9403 Feb 12 20:20 runtime_log.err
[2026-02-12 20:20:28] -rw------- 1 boinc boinc       651 Feb 12 20:20 08hKDmI4ZA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTOkKDm0MV5gm.diag
[2026-02-12 20:20:28] -rw-r--r-- 1 boinc boinc     21419 Feb 12 20:20 stderr.txt
[2026-02-12 20:20:28] HITS file was successfully produced:
[2026-02-12 20:20:28] -rw------- 1 boinc boinc 282593886 Feb 12 20:18 shared/HITS.pool.root.1
[2026-02-12 20:20:28]  *** Contents of shared directory: ***
[2026-02-12 20:20:28] total 950144
[2026-02-12 20:20:28] -rw-r--r-- 2 boinc boinc 688477243 Feb 12 18:43 ATLAS.root_0
[2026-02-12 20:20:28] -rw-r--r-- 2 boinc boinc     15845 Feb 12 18:43 start_atlas.sh
[2026-02-12 20:20:28] -rw-r--r-- 2 boinc boinc    597958 Feb 12 18:43 input.tar.gz
[2026-02-12 20:20:28] -rw------- 1 boinc boinc 282593886 Feb 12 20:18 HITS.pool.root.1
[2026-02-12 20:20:28] -rw------- 1 boinc boinc   1249280 Feb 12 20:20 result.tar.gz
20:20:30 (3176780): run_atlas exited; CPU time 61181.807461
20:20:30 (3176780): called boinc_finish(0)

</stderr_txt>
]]>

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