Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:04:46 (3076202): wrapper (7.7.26015): starting
16:04:46 (3076202): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 16:04:46] Arguments: --nthreads 12
[2026-02-12 16:04:46] Threads: 12
[2026-02-12 16:04:46] Checking for CVMFS
[2026-02-12 16:04:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 16:04:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 16:04:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 16:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 16:04:47] 2.12.7.0 5265 4373 75028 156170 3 188 3965596 4194304 1834 130560 0 6255077 99.995 140637 133 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-12 16:04:47] CVMFS is ok
[2026-02-12 16:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 16:04:47] Checking for apptainer binary...
[2026-02-12 16:04:47] apptainer is not installed, using version from CVMFS
[2026-02-12 16:04:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 16:04:48] Trebeth
[2026-02-12 16:04:48] apptainer works
[2026-02-12 16:04:48] Set ATHENA_PROC_NUMBER=12
[2026-02-12 16:04:48] Set ATHENA_CORE_NUMBER=12
[2026-02-12 16:04:48] Starting ATLAS job with PandaID=7012955794
[2026-02-12 16:04:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 17:34:16]  *** The last 200 lines of the pilot log: ***
[2026-02-12 17:34:16]  lfn=log.48431096._034649.job.log.tgz.1
[2026-02-12 17:34:16]  mtime=0
[2026-02-12 17:34:16]  protocol_id=None
[2026-02-12 17:34:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 17:34:16]  replicas=None
[2026-02-12 17:34:16]  scope=mc23_13p6TeV
[2026-02-12 17:34:16]  status=None
[2026-02-12 17:34:16]  status_code=0
[2026-02-12 17:34:16]  storage_token=
[2026-02-12 17:34:16]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-7012955794/log.48431096._034649.job.log.tgz.1
[2026-02-12 17:34:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/86/log.48431096._034649.job.log.tgz.1
[2026-02-12 17:34:16]  workdir=None
[2026-02-12 17:34:16] ]
[2026-02-12 17:34:16] 2026-02-12 22:33:32,754 | INFO     | transferring file log.48431096._034649.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955794/log.48431096._034649.job.log.tgz.1 to /var/lib/boinc
[2026-02-12 17:34:16] 2026-02-12 22:33:32,755 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955794/log.48431096._034649.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.484310
[2026-02-12 17:34:16] 2026-02-12 22:33:32,768 | INFO     | adding to output.list: log.48431096._034649.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/86/log.48431096._034649.job.log.tg
[2026-02-12 17:34:16] 2026-02-12 22:33:32,769 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 17:34:16] 2026-02-12 22:33:32,769 | INFO     | summary of transferred files:
[2026-02-12 17:34:16] 2026-02-12 22:33:32,769 | INFO     |  -- lfn=log.48431096._034649.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 17:34:16] 2026-02-12 22:33:32,769 | INFO     | stage-out finished correctly
[2026-02-12 17:34:16] 2026-02-12 22:33:33,119 | INFO     | time since job start (5312s) is within the limit (349056.0s)
[2026-02-12 17:34:16] 2026-02-12 22:33:33,896 | INFO     | monitor loop #400: job 0:7012955794 is in state 'finished'
[2026-02-12 17:34:16] 2026-02-12 22:33:33,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 17:34:16] 2026-02-12 22:33:34,353 | INFO     | PID=3080577 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 17:34:16] 2026-02-12 22:33:34,354 | INFO     | .. there are 3 such processes running
[2026-02-12 17:34:16] 2026-02-12 22:33:35,354 | INFO     | time since job start (5314s) is within the limit (349056.0s)
[2026-02-12 17:34:16] 2026-02-12 22:33:36,110 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 17:34:16] 2026-02-12 22:33:36,398 | INFO     | monitor loop #401: job 0:7012955794 is in state 'finished'
[2026-02-12 17:34:16] 2026-02-12 22:33:36,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,358 | INFO     | time since job start (5316s) is within the limit (349056.0s)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,474 | INFO     | job 7012955794 has state=finished
[2026-02-12 17:34:16] 2026-02-12 22:33:37,475 | INFO     | preparing for final server update for job 7012955794 in state='finished'
[2026-02-12 17:34:16] 2026-02-12 22:33:37,475 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955794/jobReport.json
[2026-02-12 17:34:16] 2026-02-12 22:33:37,477 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-02-12 17:34:16] 2026-02-12 22:33:37,477 | INFO     | this job has now completed (state=finished)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,478 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,478 | INFO     | log transfer has been attempted: DONE
[2026-02-12 17:34:16] 2026-02-12 22:33:37,478 | INFO     | job 7012955794 has finished - writing final server update
[2026-02-12 17:34:16] 2026-02-12 22:33:37,478 | INFO     | total number of processed events: 400 (read)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,507 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-7012955794/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,507 | INFO     | extracted standard info from prmon json
[2026-02-12 17:34:16] 2026-02-12 22:33:37,508 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 17:34:16] 2026-02-12 22:33:37,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 17:34:16] 2026-02-12 22:33:37,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 17:34:16] 2026-02-12 22:33:37,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 17:34:16] 2026-02-12 22:33:37,510 | INFO     | fitting pss+swap vs Time
[2026-02-12 17:34:16] 2026-02-12 22:33:37,510 | INFO     | sum of square deviations: 158737860.0
[2026-02-12 17:34:16] 2026-02-12 22:33:37,510 | INFO     | sum of deviations: 5453564608.499999
[2026-02-12 17:34:16] 2026-02-12 22:33:37,511 | INFO     | mean x: 1770933034.5
[2026-02-12 17:34:16] 2026-02-12 22:33:37,511 | INFO     | mean y: 2749671.2125
[2026-02-12 17:34:16] 2026-02-12 22:33:37,511 | INFO     | intersect: -60839054048.28269
[2026-02-12 17:34:16] 2026-02-12 22:33:37,511 | INFO     | chi2: 0.18008624000304146
[2026-02-12 17:34:16] 2026-02-12 22:33:37,511 | INFO     | current memory leak: 34.36 B/s (using 80 data points, chi2=0.18)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,511 | INFO     | could have reported an average CPU frequency of 2834 MHz (6 samples)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | ..............................
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . Timing measurements:
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . get job = 0 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . initial setup = 5 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . payload setup = 4 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . stage-in = 0 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . payload execution = 5291 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . stage-out = 0 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | . log creation = 0 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,512 | INFO     | ..............................
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | 
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | job summary report
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | --------------------------------------------------
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | PanDA job id: 7012955794
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | task id: 48431096
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | errors: (none)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 17:34:16] 2026-02-12 22:33:37,594 | INFO     | pilot state: finished 
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | transexitcode: 0
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | exeerrorcode: 0
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | exeerrordiag: 
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | exitcode: 0
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | exitmsg: OK
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | cpuconsumptiontime: 56536 s
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | nevents: 400
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | neventsw: 0
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | pid: 3085365
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | pgrp: 3085365
[2026-02-12 17:34:16] 2026-02-12 22:33:37,595 | INFO     | corecount: 12
[2026-02-12 17:34:16] 2026-02-12 22:33:37,596 | INFO     | event service: False
[2026-02-12 17:34:16] 2026-02-12 22:33:37,596 | INFO     | sizes: {0: 2281958, 1: 2282220, 11: 2282248, 5299: 2308793, 5300: 2317805, 5304: 2317861, 5305: 2318183}
[2026-02-12 17:34:16] 2026-02-12 22:33:37,596 | INFO     | --------------------------------------------------
[2026-02-12 17:34:16] 2026-02-12 22:33:37,596 | INFO     | 
[2026-02-12 17:34:16] 2026-02-12 22:33:37,596 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-02-12 17:34:16] 2026-02-12 22:33:37,610 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,613 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 17:34:16] 2026-02-12 22:33:37,613 | INFO     | job 7012955794 has completed (purged errors)
[2026-02-12 17:34:16] 2026-02-12 22:33:37,613 | INFO     | overall cleanup function is called
[2026-02-12 17:34:16] 2026-02-12 22:33:38,618 | INFO     | --- collectZombieJob: --- 10, [3085365]
[2026-02-12 17:34:16] 2026-02-12 22:33:38,618 | INFO     | zombie collector waiting for pid 3085365
[2026-02-12 17:34:16] 2026-02-12 22:33:38,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 17:34:16] 2026-02-12 22:33:38,619 | INFO     | collected zombie processes
[2026-02-12 17:34:16] 2026-02-12 22:33:38,619 | INFO     | will attempt to kill all subprocesses of pid=3085365
[2026-02-12 17:34:16] 2026-02-12 22:33:38,835 | INFO     | process IDs to be killed: [3085365] (in reverse order)
[2026-02-12 17:34:16] 2026-02-12 22:33:38,898 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 17:34:16] 2026-02-12 22:33:38,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 17:34:16] 2026-02-12 22:33:38,905 | INFO     | did not find any defunct processes belonging to 3085365
[2026-02-12 17:34:16] 2026-02-12 22:33:38,909 | INFO     | did not find any defunct processes belonging to 3085365
[2026-02-12 17:34:16] 2026-02-12 22:33:38,910 | INFO     | ready for new job
[2026-02-12 17:34:16] 2026-02-12 22:33:38,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 17:34:16] 2026-02-12 22:33:38,911 | INFO     | **************************************
[2026-02-12 17:34:16] 2026-02-12 22:33:38,911 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 17:34:16] 2026-02-12 22:33:38,911 | INFO     | **************************************
[2026-02-12 17:34:16] 2026-02-12 22:33:38,912 | INFO     | 
[2026-02-12 17:34:16] 2026-02-12 22:33:38,933 | INFO     | architecture information:
[2026-02-12 17:34:16] 2026-02-12 22:33:38,934 | INFO     | executing command: cat /etc/os-release
[2026-02-12 17:34:16] 2026-02-12 22:33:38,944 | INFO     | cat /etc/os-release:
[2026-02-12 17:34:16] NAME="CentOS Linux"
[2026-02-12 17:34:16] VERSION="7 (Core)"
[2026-02-12 17:34:16] ID="centos"
[2026-02-12 17:34:16] ID_LIKE="rhel fedora"
[2026-02-12 17:34:16] VERSION_ID="7"
[2026-02-12 17:34:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 17:34:16] ANSI_COLOR="0;31"
[2026-02-12 17:34:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 17:34:16] HOME_URL="https://www.centos.org/"
[2026-02-12 17:34:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 17:34:16] 
[2026-02-12 17:34:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 17:34:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 17:34:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 17:34:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 17:34:16] 
[2026-02-12 17:34:16] 2026-02-12 22:33:38,945 | INFO     | **************************************
[2026-02-12 17:34:16] 2026-02-12 22:33:39,446 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-02-12 17:34:16] 2026-02-12 22:33:39,459 | INFO     | sufficient remaining disk space (372433223680 B)
[2026-02-12 17:34:16] 2026-02-12 22:33:39,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 17:34:16] 2026-02-12 22:33:39,460 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 17:34:16] 2026-02-12 22:33:39,460 | INFO     | update_server=False
[2026-02-12 17:34:16] 2026-02-12 22:33:39,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 17:34:16] 2026-02-12 22:33:39,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 17:34:16] 2026-02-12 22:33:39,462 | INFO     | all job control threads have been joined
[2026-02-12 17:34:16] 2026-02-12 22:33:39,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 17:34:16] 2026-02-12 22:33:39,907 | INFO     | aborting loop
[2026-02-12 17:34:16] 2026-02-12 22:33:39,922 | INFO     | all data control threads have been joined
[2026-02-12 17:34:16] 2026-02-12 22:33:40,170 | INFO     | all payload control threads have been joined
[2026-02-12 17:34:16] 2026-02-12 22:33:40,462 | INFO     | [job] retrieve thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,464 | INFO     | [job] control thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,465 | INFO     | [job] queue monitor thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,470 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,618 | INFO     | [data] copytool_in thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 17:34:16] 2026-02-12 22:33:40,913 | INFO     | [job] job monitor thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,926 | INFO     | [data] control thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:40,958 | INFO     | [payload] validate_post thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:41,174 | INFO     | [payload] control thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:41,302 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:41,598 | INFO     | [job] validate thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:41,726 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:41,986 | INFO     | [payload] failed_post thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:42,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 17:34:16] 2026-02-12 22:33:42,870 | INFO     | [data] copytool_out thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:46,202 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:33:50,222 | INFO     | job.realtimelogging is not enabled
[2026-02-12 17:34:16] 2026-02-12 22:33:51,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 17:34:16] 2026-02-12 22:34:09,674 | INFO     | [monitor] cgroup control has ended
[2026-02-12 17:34:16] 2026-02-12 22:34:10,661 | INFO     | PID=3080577 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 17:34:16] 2026-02-12 22:34:10,661 | INFO     | .. there are 3 such processes running
[2026-02-12 17:34:16] 2026-02-12 22:34:10,661 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 17:34:16] 2026-02-12 22:34:10,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 17:34:16] 2026-02-12 22:34:10,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 17:34:16] 2026-02-12 22:34:11,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150945400640)>', '<ExcThread(monitor, started 140150277400320)>']
[2026-02-12 17:34:16] 2026-02-12 22:34:11,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 17:34:16] 2026-02-12 22:34:11,667 | INFO     | [monitor] control thread has ended
[2026-02-12 17:34:16] 2026-02-12 22:34:16,100 | INFO     | all workflow threads have been joined
[2026-02-12 17:34:16] 2026-02-12 22:34:16,101 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 17:34:16] 2026-02-12 22:34:16,101 | INFO     | traces error code: 0
[2026-02-12 17:34:16] 2026-02-12 22:34:16,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 17:34:16] 2026-02-12 22:34:16,195 [wrapper] ==== pilot stdout END ====
[2026-02-12 17:34:16] 2026-02-12 22:34:16,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 17:34:16] 2026-02-12 22:34:16,197 [wrapper] pilotpid: 3080577
[2026-02-12 17:34:16] 2026-02-12 22:34:16,199 [wrapper] Pilot exit status: 0
[2026-02-12 17:34:16] 2026-02-12 22:34:16,205 [wrapper] pandaids: 7012955794
[2026-02-12 17:34:16] 2026-02-12 22:34:16,235 [wrapper] cleanup supervisor_pilot 3132511 3080578
[2026-02-12 17:34:16] 2026-02-12 22:34:16,236 [wrapper] Test setup, not cleaning
[2026-02-12 17:34:16] 2026-02-12 22:34:16,240 [wrapper] apfmon messages muted
[2026-02-12 17:34:16] 2026-02-12 22:34:16,242 [wrapper] ==== wrapper stdout END ====
[2026-02-12 17:34:16] 2026-02-12 22:34:16,244 [wrapper] ==== wrapper stderr END ====
[2026-02-12 17:34:16]  *** Error codes and diagnostics ***
[2026-02-12 17:34:16]     "exeErrorCode": 0,
[2026-02-12 17:34:16]     "exeErrorDiag": "",
[2026-02-12 17:34:16]     "pilotErrorCode": 0,
[2026-02-12 17:34:16]     "pilotErrorDiag": "",
[2026-02-12 17:34:16]  *** Listing of results directory ***
[2026-02-12 17:34:16] total 936112
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc    584627 Feb 11 19:45 pilot3.tar.gz
[2026-02-12 17:34:16] -rwx------ 1 boinc boinc     36322 Feb 11 19:47 runpilot2-wrapper.sh
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc      5111 Feb 11 19:47 queuedata.json
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc       100 Feb 12 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 17:34:16] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 16:04 run_atlas
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc       105 Feb 12 16:04 job.xml
[2026-02-12 17:34:16] -rw-r--r-- 2 boinc boinc     15845 Feb 12 16:04 start_atlas.sh
[2026-02-12 17:34:16] drwxrwx--x 2 boinc boinc      4096 Feb 12 16:04 shared
[2026-02-12 17:34:16] -rw-r--r-- 2 boinc boinc    597965 Feb 12 16:04 input.tar.gz
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc      7579 Feb 12 16:04 init_data.xml
[2026-02-12 17:34:16] -rw-r--r-- 2 boinc boinc 675234654 Feb 12 16:04 EVNT.48431094._000151.pool.root.1
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc         0 Feb 12 16:04 boinc_lockfile
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc      2555 Feb 12 16:04 pandaJob.out
[2026-02-12 17:34:16] -rw------- 1 boinc boinc        50 Feb 12 16:04 setup.sh.local
[2026-02-12 17:34:16] -rw------- 1 boinc boinc   1000246 Feb 12 16:04 agis_schedconf.cvmfs.json
[2026-02-12 17:34:16] -rw------- 1 boinc boinc   1512955 Feb 12 16:04 agis_ddmendpoints.agis.ALL.json
[2026-02-12 17:34:16] -rw------- 1 boinc boinc       429 Feb 12 16:05 workernode_map.json
[2026-02-12 17:34:16] drwx------ 5 boinc boinc      4096 Feb 12 16:05 pilot3
[2026-02-12 17:34:16] -rw------- 1 boinc boinc 277030290 Feb 12 17:32 HITS.48431096._034649.pool.root.1
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc       530 Feb 12 17:33 boinc_task_state.xml
[2026-02-12 17:34:16] -rw------- 1 boinc boinc        95 Feb 12 17:33 pilot_heartbeat.json
[2026-02-12 17:34:16] -rw------- 1 boinc boinc      1022 Feb 12 17:33 memory_monitor_summary.json
[2026-02-12 17:34:16] -rw------- 1 boinc boinc    400317 Feb 12 17:33 log.48431096._034649.job.log.tgz.1
[2026-02-12 17:34:16] -rw------- 1 boinc boinc      6326 Feb 12 17:33 heartbeat.json
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc      8192 Feb 12 17:34 boinc_mmap_file
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc        27 Feb 12 17:34 wrapper_checkpoint.txt
[2026-02-12 17:34:16] -rw------- 1 boinc boinc      4899 Feb 12 17:34 pilotlog.txt
[2026-02-12 17:34:16] -rw------- 1 boinc boinc    785804 Feb 12 17:34 log.48431096._034649.job.log.1
[2026-02-12 17:34:16] -rw------- 1 boinc boinc       357 Feb 12 17:34 output.list
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc       620 Feb 12 17:34 runtime_log
[2026-02-12 17:34:16] -rw------- 1 boinc boinc   1208320 Feb 12 17:34 result.tar.gz
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc      9403 Feb 12 17:34 runtime_log.err
[2026-02-12 17:34:16] -rw------- 1 boinc boinc       650 Feb 12 17:34 5TSLDmV2ZA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmPHlKDmCorA2n.diag
[2026-02-12 17:34:16] -rw-r--r-- 1 boinc boinc     21466 Feb 12 17:34 stderr.txt
[2026-02-12 17:34:16] HITS file was successfully produced:
[2026-02-12 17:34:16] -rw------- 1 boinc boinc 277030290 Feb 12 17:32 shared/HITS.pool.root.1
[2026-02-12 17:34:16]  *** Contents of shared directory: ***
[2026-02-12 17:34:16] total 931740
[2026-02-12 17:34:16] -rw-r--r-- 2 boinc boinc     15845 Feb 12 16:04 start_atlas.sh
[2026-02-12 17:34:16] -rw-r--r-- 2 boinc boinc    597965 Feb 12 16:04 input.tar.gz
[2026-02-12 17:34:16] -rw-r--r-- 2 boinc boinc 675234654 Feb 12 16:04 ATLAS.root_0
[2026-02-12 17:34:16] -rw------- 1 boinc boinc 277030290 Feb 12 17:32 HITS.pool.root.1
[2026-02-12 17:34:16] -rw------- 1 boinc boinc   1208320 Feb 12 17:34 result.tar.gz
17:34:17 (3076202): run_atlas exited; CPU time 56642.656585
17:34:17 (3076202): called boinc_finish(0)

</stderr_txt>
]]>

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