Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
17:17:47 (3118364): wrapper (7.7.26015): starting
17:17:47 (3118364): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 17:17:47] Arguments: --nthreads 12
[2026-02-12 17:17:47] Threads: 12
[2026-02-12 17:17:47] Checking for CVMFS
[2026-02-12 17:17:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 17:17:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 17:17:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 17:17:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 17:17:49] 2.12.7.0 5265 4446 75064 156173 2 50 3980335 4194304 1834 130560 0 6334966 99.995 145812 136 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-12 17:17:49] CVMFS is ok
[2026-02-12 17:17:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 17:17:49] Checking for apptainer binary...
[2026-02-12 17:17:49] apptainer is not installed, using version from CVMFS
[2026-02-12 17:17:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 17:17:49] Trebeth
[2026-02-12 17:17:49] apptainer works
[2026-02-12 17:17:49] Set ATHENA_PROC_NUMBER=12
[2026-02-12 17:17:49] Set ATHENA_CORE_NUMBER=12
[2026-02-12 17:17:49] Starting ATLAS job with PandaID=7012957064
[2026-02-12 17:17:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 18:50:21]  *** The last 200 lines of the pilot log: ***
[2026-02-12 18:50:21]  lfn=log.48431096._035086.job.log.tgz.1
[2026-02-12 18:50:21]  mtime=0
[2026-02-12 18:50:21]  protocol_id=None
[2026-02-12 18:50:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 18:50:21]  replicas=None
[2026-02-12 18:50:21]  scope=mc23_13p6TeV
[2026-02-12 18:50:21]  status=None
[2026-02-12 18:50:21]  status_code=0
[2026-02-12 18:50:21]  storage_token=
[2026-02-12 18:50:21]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-7012957064/log.48431096._035086.job.log.tgz.1
[2026-02-12 18:50:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/65/log.48431096._035086.job.log.tgz.1
[2026-02-12 18:50:21]  workdir=None
[2026-02-12 18:50:21] ]
[2026-02-12 18:50:21] 2026-02-12 23:49:35,290 | INFO     | transferring file log.48431096._035086.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-7012957064/log.48431096._035086.job.log.tgz.1 to /var/lib/boinc
[2026-02-12 18:50:21] 2026-02-12 23:49:35,290 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-7012957064/log.48431096._035086.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.484310
[2026-02-12 18:50:21] 2026-02-12 23:49:35,301 | INFO     | adding to output.list: log.48431096._035086.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/65/log.48431096._035086.job.log.tg
[2026-02-12 18:50:21] 2026-02-12 23:49:35,302 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 18:50:21] 2026-02-12 23:49:35,302 | INFO     | summary of transferred files:
[2026-02-12 18:50:21] 2026-02-12 23:49:35,302 | INFO     |  -- lfn=log.48431096._035086.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 18:50:21] 2026-02-12 23:49:35,302 | INFO     | stage-out finished correctly
[2026-02-12 18:50:21] 2026-02-12 23:49:35,328 | INFO     | time since job start (5489s) is within the limit (349056.0s)
[2026-02-12 18:50:21] 2026-02-12 23:49:36,409 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 18:50:21] 2026-02-12 23:49:36,698 | INFO     | PID=3122729 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 18:50:21] 2026-02-12 23:49:36,699 | INFO     | .. there are 3 such processes running
[2026-02-12 18:50:21] 2026-02-12 23:49:37,699 | INFO     | time since job start (5491s) is within the limit (349056.0s)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,246 | INFO     | job 7012957064 has state=finished
[2026-02-12 18:50:21] 2026-02-12 23:49:38,247 | INFO     | preparing for final server update for job 7012957064 in state='finished'
[2026-02-12 18:50:21] 2026-02-12 23:49:38,247 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7012957064/jobReport.json
[2026-02-12 18:50:21] 2026-02-12 23:49:38,249 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-02-12 18:50:21] 2026-02-12 23:49:38,250 | INFO     | this job has now completed (state=finished)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,250 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,250 | INFO     | log transfer has been attempted: DONE
[2026-02-12 18:50:21] 2026-02-12 23:49:38,250 | INFO     | job 7012957064 has finished - writing final server update
[2026-02-12 18:50:21] 2026-02-12 23:49:38,250 | INFO     | total number of processed events: 400 (read)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,280 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7012957064/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,280 | INFO     | extracted standard info from prmon json
[2026-02-12 18:50:21] 2026-02-12 23:49:38,280 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 18:50:21] 2026-02-12 23:49:38,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 18:50:21] 2026-02-12 23:49:38,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 18:50:21] 2026-02-12 23:49:38,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 18:50:21] 2026-02-12 23:49:38,283 | INFO     | fitting pss+swap vs Time
[2026-02-12 18:50:21] 2026-02-12 23:49:38,283 | INFO     | sum of square deviations: 177275882.0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,284 | INFO     | sum of deviations: -7746128127.0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,284 | INFO     | mean x: 1770937512.0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,284 | INFO     | mean y: 2867724.012048193
[2026-02-12 18:50:21] 2026-02-12 23:49:38,284 | INFO     | intersect: 77384566340.31114
[2026-02-12 18:50:21] 2026-02-12 23:49:38,284 | INFO     | chi2: 0.17660682549828027
[2026-02-12 18:50:21] 2026-02-12 23:49:38,284 | INFO     | current memory leak: -43.70 B/s (using 83 data points, chi2=0.18)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | could have reported an average CPU frequency of 3007 MHz (7 samples)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | ..............................
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | . Timing measurements:
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | . get job = 0 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | . initial setup = 6 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | . payload setup = 5 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,285 | INFO     | . stage-in = 0 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,286 | INFO     | . payload execution = 5468 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,286 | INFO     | . stage-out = 0 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,286 | INFO     | . log creation = 0 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,286 | INFO     | ..............................
[2026-02-12 18:50:21] 2026-02-12 23:49:38,374 | INFO     | 
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | job summary report
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | --------------------------------------------------
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | PanDA job id: 7012957064
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | task id: 48431096
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | errors: (none)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 18:50:21] 2026-02-12 23:49:38,375 | INFO     | pilot state: finished 
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | transexitcode: 0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | exeerrorcode: 0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | exeerrordiag: 
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | exitcode: 0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | exitmsg: OK
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | cpuconsumptiontime: 58762 s
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | nevents: 400
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | neventsw: 0
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | pid: 3127531
[2026-02-12 18:50:21] 2026-02-12 23:49:38,376 | INFO     | pgrp: 3127531
[2026-02-12 18:50:21] 2026-02-12 23:49:38,377 | INFO     | corecount: 12
[2026-02-12 18:50:21] 2026-02-12 23:49:38,377 | INFO     | event service: False
[2026-02-12 18:50:21] 2026-02-12 23:49:38,377 | INFO     | sizes: {0: 2282220, 11: 2282220, 5477: 2308845, 5478: 2317857, 5479: 2317913, 5481: 2318107}
[2026-02-12 18:50:21] 2026-02-12 23:49:38,377 | INFO     | --------------------------------------------------
[2026-02-12 18:50:21] 2026-02-12 23:49:38,377 | INFO     | 
[2026-02-12 18:50:21] 2026-02-12 23:49:38,377 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | job 7012957064 has completed (purged errors)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,393 | INFO     | overall cleanup function is called
[2026-02-12 18:50:21] 2026-02-12 23:49:38,669 | WARNING  | process 3127531 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 18:50:21] 2026-02-12 23:49:38,806 | INFO     | using path: /var/lib/boinc-client/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 18:50:21] 2026-02-12 23:49:38,993 | INFO     | number of running child processes to parent process 3127531: 1
[2026-02-12 18:50:21] 2026-02-12 23:49:38,993 | INFO     | maximum number of monitored processes: 6
[2026-02-12 18:50:21] 2026-02-12 23:49:38,993 | INFO     | aborting job monitoring since job object (job id=7012957064) has expired
[2026-02-12 18:50:21] 2026-02-12 23:49:39,398 | INFO     | --- collectZombieJob: --- 10, [3127531]
[2026-02-12 18:50:21] 2026-02-12 23:49:39,398 | INFO     | zombie collector waiting for pid 3127531
[2026-02-12 18:50:21] 2026-02-12 23:49:39,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 18:50:21] 2026-02-12 23:49:39,399 | INFO     | collected zombie processes
[2026-02-12 18:50:21] 2026-02-12 23:49:39,399 | INFO     | will attempt to kill all subprocesses of pid=3127531
[2026-02-12 18:50:21] 2026-02-12 23:49:39,592 | INFO     | process IDs to be killed: [3127531] (in reverse order)
[2026-02-12 18:50:21] 2026-02-12 23:49:39,650 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 18:50:21] 2026-02-12 23:49:39,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 18:50:21] 2026-02-12 23:49:39,656 | INFO     | did not find any defunct processes belonging to 3127531
[2026-02-12 18:50:21] 2026-02-12 23:49:39,660 | INFO     | did not find any defunct processes belonging to 3127531
[2026-02-12 18:50:21] 2026-02-12 23:49:39,661 | INFO     | ready for new job
[2026-02-12 18:50:21] 2026-02-12 23:49:39,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 18:50:21] 2026-02-12 23:49:39,662 | INFO     | **************************************
[2026-02-12 18:50:21] 2026-02-12 23:49:39,662 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 18:50:21] 2026-02-12 23:49:39,662 | INFO     | **************************************
[2026-02-12 18:50:21] 2026-02-12 23:49:39,663 | INFO     | 
[2026-02-12 18:50:21] 2026-02-12 23:49:39,685 | INFO     | architecture information:
[2026-02-12 18:50:21] 2026-02-12 23:49:39,686 | INFO     | executing command: cat /etc/os-release
[2026-02-12 18:50:21] 2026-02-12 23:49:39,697 | INFO     | cat /etc/os-release:
[2026-02-12 18:50:21] NAME="CentOS Linux"
[2026-02-12 18:50:21] VERSION="7 (Core)"
[2026-02-12 18:50:21] ID="centos"
[2026-02-12 18:50:21] ID_LIKE="rhel fedora"
[2026-02-12 18:50:21] VERSION_ID="7"
[2026-02-12 18:50:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 18:50:21] ANSI_COLOR="0;31"
[2026-02-12 18:50:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 18:50:21] HOME_URL="https://www.centos.org/"
[2026-02-12 18:50:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 18:50:21] 
[2026-02-12 18:50:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 18:50:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 18:50:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 18:50:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 18:50:21] 
[2026-02-12 18:50:21] 2026-02-12 23:49:39,698 | INFO     | **************************************
[2026-02-12 18:50:21] 2026-02-12 23:49:40,198 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-02-12 18:50:21] 2026-02-12 23:49:40,211 | INFO     | sufficient remaining disk space (371666714624 B)
[2026-02-12 18:50:21] 2026-02-12 23:49:40,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 18:50:21] 2026-02-12 23:49:40,212 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 18:50:21] 2026-02-12 23:49:40,212 | INFO     | update_server=False
[2026-02-12 18:50:21] 2026-02-12 23:49:40,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 18:50:21] 2026-02-12 23:49:40,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:50:21] 2026-02-12 23:49:40,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 18:50:21] 2026-02-12 23:49:40,213 | INFO     | aborting loop
[2026-02-12 18:50:21] 2026-02-12 23:49:40,810 | INFO     | all payload control threads have been joined
[2026-02-12 18:50:21] 2026-02-12 23:49:40,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 18:50:21] 2026-02-12 23:49:40,946 | INFO     | all data control threads have been joined
[2026-02-12 18:50:21] 2026-02-12 23:49:41,214 | INFO     | [job] retrieve thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:41,218 | INFO     | [job] queue monitor thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:41,218 | INFO     | [job] job monitor thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:41,318 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:41,454 | INFO     | [payload] failed_post thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:41,624 | INFO     | all job control threads have been joined
[2026-02-12 18:50:21] 2026-02-12 23:49:41,816 | INFO     | [payload] control thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:41,950 | INFO     | [data] control thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,066 | INFO     | [job] validate thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,080 | INFO     | [payload] validate_post thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,234 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 18:50:21] 2026-02-12 23:49:42,626 | INFO     | [job] control thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,646 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,648 | INFO     | [data] copytool_in thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:42,882 | INFO     | [data] copytool_out thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:46,512 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:49:50,664 | INFO     | job.realtimelogging is not enabled
[2026-02-12 18:50:21] 2026-02-12 23:49:51,666 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 18:50:21] 2026-02-12 23:50:10,998 | INFO     | PID=3122729 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 18:50:21] 2026-02-12 23:50:10,998 | INFO     | .. there are 3 such processes running
[2026-02-12 18:50:21] 2026-02-12 23:50:10,998 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 18:50:21] 2026-02-12 23:50:10,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 18:50:21] 2026-02-12 23:50:10,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 18:50:21] 2026-02-12 23:50:14,590 | INFO     | [monitor] cgroup control has ended
[2026-02-12 18:50:21] 2026-02-12 23:50:15,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474783827776)>', '<ExcThread(monitor, started 140474203494144)>']
[2026-02-12 18:50:21] 2026-02-12 23:50:16,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 18:50:21] 2026-02-12 23:50:16,019 | INFO     | [monitor] control thread has ended
[2026-02-12 18:50:21] 2026-02-12 23:50:20,886 | INFO     | all workflow threads have been joined
[2026-02-12 18:50:21] 2026-02-12 23:50:20,886 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 18:50:21] 2026-02-12 23:50:20,887 | INFO     | traces error code: 0
[2026-02-12 18:50:21] 2026-02-12 23:50:20,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 18:50:21] 2026-02-12 23:50:20,974 [wrapper] ==== pilot stdout END ====
[2026-02-12 18:50:21] 2026-02-12 23:50:20,975 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 18:50:21] 2026-02-12 23:50:20,976 [wrapper] pilotpid: 3122729
[2026-02-12 18:50:21] 2026-02-12 23:50:20,978 [wrapper] Pilot exit status: 0
[2026-02-12 18:50:21] 2026-02-12 23:50:20,984 [wrapper] pandaids: 7012957064
[2026-02-12 18:50:21] 2026-02-12 23:50:21,016 [wrapper] cleanup supervisor_pilot 3191378 3122730
[2026-02-12 18:50:21] 2026-02-12 23:50:21,018 [wrapper] Test setup, not cleaning
[2026-02-12 18:50:21] 2026-02-12 23:50:21,019 [wrapper] apfmon messages muted
[2026-02-12 18:50:21] 2026-02-12 23:50:21,021 [wrapper] ==== wrapper stdout END ====
[2026-02-12 18:50:21] 2026-02-12 23:50:21,022 [wrapper] ==== wrapper stderr END ====
[2026-02-12 18:50:21]  *** Error codes and diagnostics ***
[2026-02-12 18:50:21]     "exeErrorCode": 0,
[2026-02-12 18:50:21]     "exeErrorDiag": "",
[2026-02-12 18:50:21]     "pilotErrorCode": 0,
[2026-02-12 18:50:21]     "pilotErrorDiag": "",
[2026-02-12 18:50:21]  *** Listing of results directory ***
[2026-02-12 18:50:21] total 941816
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc    584627 Feb 11 19:45 pilot3.tar.gz
[2026-02-12 18:50:21] -rwx------ 1 boinc boinc     36322 Feb 11 19:47 runpilot2-wrapper.sh
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc      5111 Feb 11 19:49 queuedata.json
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc       100 Feb 12 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 18:50:21] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 17:17 run_atlas
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc       105 Feb 12 17:17 job.xml
[2026-02-12 18:50:21] -rw-r--r-- 2 boinc boinc 675518347 Feb 12 17:17 EVNT.48431094._000160.pool.root.1
[2026-02-12 18:50:21] -rw-r--r-- 2 boinc boinc     15845 Feb 12 17:17 start_atlas.sh
[2026-02-12 18:50:21] drwxrwx--x 2 boinc boinc      4096 Feb 12 17:17 shared
[2026-02-12 18:50:21] -rw-r--r-- 2 boinc boinc    597958 Feb 12 17:17 input.tar.gz
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc      7579 Feb 12 17:17 init_data.xml
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc         0 Feb 12 17:17 boinc_lockfile
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc      2555 Feb 12 17:17 pandaJob.out
[2026-02-12 18:50:21] -rw------- 1 boinc boinc        50 Feb 12 17:17 setup.sh.local
[2026-02-12 18:50:21] -rw------- 1 boinc boinc   1000254 Feb 12 17:17 agis_schedconf.cvmfs.json
[2026-02-12 18:50:21] -rw------- 1 boinc boinc   1512955 Feb 12 17:18 agis_ddmendpoints.agis.ALL.json
[2026-02-12 18:50:21] -rw------- 1 boinc boinc       430 Feb 12 17:18 workernode_map.json
[2026-02-12 18:50:21] drwx------ 5 boinc boinc      4096 Feb 12 17:18 pilot3
[2026-02-12 18:50:21] -rw------- 1 boinc boinc 282563612 Feb 12 18:49 HITS.48431096._035086.pool.root.1
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc       530 Feb 12 18:49 boinc_task_state.xml
[2026-02-12 18:50:21] -rw------- 1 boinc boinc        95 Feb 12 18:49 pilot_heartbeat.json
[2026-02-12 18:50:21] -rw------- 1 boinc boinc      1020 Feb 12 18:49 memory_monitor_summary.json
[2026-02-12 18:50:21] -rw------- 1 boinc boinc    388076 Feb 12 18:49 log.48431096._035086.job.log.tgz.1
[2026-02-12 18:50:21] -rw------- 1 boinc boinc      6330 Feb 12 18:49 heartbeat.json
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc      8192 Feb 12 18:50 boinc_mmap_file
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc        27 Feb 12 18:50 wrapper_checkpoint.txt
[2026-02-12 18:50:21] -rw------- 1 boinc boinc      4899 Feb 12 18:50 pilotlog.txt
[2026-02-12 18:50:21] -rw------- 1 boinc boinc    810945 Feb 12 18:50 log.48431096._035086.job.log.1
[2026-02-12 18:50:21] -rw------- 1 boinc boinc       357 Feb 12 18:50 output.list
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc       620 Feb 12 18:50 runtime_log
[2026-02-12 18:50:21] -rw------- 1 boinc boinc   1218560 Feb 12 18:50 result.tar.gz
[2026-02-12 18:50:21] -rw------- 1 boinc boinc       650 Feb 12 18:50 XTDLDms2ZA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDJlKDmOqyj4n.diag
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc      9403 Feb 12 18:50 runtime_log.err
[2026-02-12 18:50:21] -rw-r--r-- 1 boinc boinc     21456 Feb 12 18:50 stderr.txt
[2026-02-12 18:50:21] HITS file was successfully produced:
[2026-02-12 18:50:21] -rw------- 1 boinc boinc 282563612 Feb 12 18:49 shared/HITS.pool.root.1
[2026-02-12 18:50:21]  *** Contents of shared directory: ***
[2026-02-12 18:50:21] total 937432
[2026-02-12 18:50:21] -rw-r--r-- 2 boinc boinc 675518347 Feb 12 17:17 ATLAS.root_0
[2026-02-12 18:50:21] -rw-r--r-- 2 boinc boinc     15845 Feb 12 17:17 start_atlas.sh
[2026-02-12 18:50:21] -rw-r--r-- 2 boinc boinc    597958 Feb 12 17:17 input.tar.gz
[2026-02-12 18:50:21] -rw------- 1 boinc boinc 282563612 Feb 12 18:49 HITS.pool.root.1
[2026-02-12 18:50:21] -rw------- 1 boinc boinc   1218560 Feb 12 18:50 result.tar.gz
18:50:23 (3118364): run_atlas exited; CPU time 58854.980113
18:50:23 (3118364): called boinc_finish(0)

</stderr_txt>
]]>

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