Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
15:44:08 (3058224): wrapper (7.7.26015): starting
15:44:08 (3058224): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 15:44:08] Arguments: --nthreads 12
[2026-02-12 15:44:08] Threads: 12
[2026-02-12 15:44:08] Checking for CVMFS
[2026-02-12 15:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 15:44:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 15:44:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 15:44:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 15:44:10] 2.12.7.0 5265 4352 74760 156170 0 50 3963081 4194304 1834 130560 0 6215773 99.995 140633 133 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-12 15:44:10] CVMFS is ok
[2026-02-12 15:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 15:44:10] Checking for apptainer binary...
[2026-02-12 15:44:10] apptainer is not installed, using version from CVMFS
[2026-02-12 15:44:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 15:44:10] Trebeth
[2026-02-12 15:44:10] apptainer works
[2026-02-12 15:44:10] Set ATHENA_PROC_NUMBER=12
[2026-02-12 15:44:10] Set ATHENA_CORE_NUMBER=12
[2026-02-12 15:44:10] Starting ATLAS job with PandaID=7012955796
[2026-02-12 15:44:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 17:17:41]  *** The last 200 lines of the pilot log: ***
[2026-02-12 17:17:41]  is_altstaged=None
[2026-02-12 17:17:41]  is_tar=False
[2026-02-12 17:17:41]  lfn=log.48431096._034651.job.log.tgz.1
[2026-02-12 17:17:41]  mtime=0
[2026-02-12 17:17:41]  protocol_id=None
[2026-02-12 17:17:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 17:17:41]  replicas=None
[2026-02-12 17:17:41]  scope=mc23_13p6TeV
[2026-02-12 17:17:41]  status=None
[2026-02-12 17:17:41]  status_code=0
[2026-02-12 17:17:41]  storage_token=
[2026-02-12 17:17:41]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-7012955796/log.48431096._034651.job.log.tgz.1
[2026-02-12 17:17:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/51/log.48431096._034651.job.log.tgz.1
[2026-02-12 17:17:41]  workdir=None
[2026-02-12 17:17:41] ]
[2026-02-12 17:17:41] 2026-02-12 22:16:37,995 | INFO     | transferring file log.48431096._034651.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-7012955796/log.48431096._034651.job.log.tgz.1 to /var/lib/boinc
[2026-02-12 17:17:41] 2026-02-12 22:16:37,995 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-7012955796/log.48431096._034651.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.484310
[2026-02-12 17:17:41] 2026-02-12 22:16:38,008 | INFO     | adding to output.list: log.48431096._034651.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/51/log.48431096._034651.job.log.tg
[2026-02-12 17:17:41] 2026-02-12 22:16:38,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 17:17:41] 2026-02-12 22:16:38,009 | INFO     | summary of transferred files:
[2026-02-12 17:17:41] 2026-02-12 22:16:38,009 | INFO     |  -- lfn=log.48431096._034651.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 17:17:41] 2026-02-12 22:16:38,009 | INFO     | stage-out finished correctly
[2026-02-12 17:17:41] 2026-02-12 22:16:38,327 | INFO     | time since job start (5533s) is within the limit (349056.0s)
[2026-02-12 17:17:41] 2026-02-12 22:16:40,026 | WARNING  | process 3067455 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 17:17:41] 2026-02-12 22:16:40,026 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7012955796/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 17:17:41] 2026-02-12 22:16:40,188 | INFO     | number of running child processes to parent process 3067455: 1
[2026-02-12 17:17:41] 2026-02-12 22:16:40,188 | INFO     | maximum number of monitored processes: 6
[2026-02-12 17:17:41] 2026-02-12 22:16:40,333 | INFO     | time since job start (5535s) is within the limit (349056.0s)
[2026-02-12 17:17:41] 2026-02-12 22:16:40,849 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 17:17:41] 2026-02-12 22:16:41,587 | INFO     | PID=3062632 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-12 17:17:41] 2026-02-12 22:16:41,587 | INFO     | .. there are 3 such processes running
[2026-02-12 17:17:41] 2026-02-12 22:16:41,868 | INFO     | job 7012955796 has state=finished
[2026-02-12 17:17:41] 2026-02-12 22:16:41,868 | INFO     | preparing for final server update for job 7012955796 in state='finished'
[2026-02-12 17:17:41] 2026-02-12 22:16:41,868 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7012955796/jobReport.json
[2026-02-12 17:17:41] 2026-02-12 22:16:41,871 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-02-12 17:17:41] 2026-02-12 22:16:41,871 | INFO     | this job has now completed (state=finished)
[2026-02-12 17:17:41] 2026-02-12 22:16:41,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 17:17:41] 2026-02-12 22:16:41,871 | INFO     | log transfer has been attempted: DONE
[2026-02-12 17:17:41] 2026-02-12 22:16:41,871 | INFO     | job 7012955796 has finished - writing final server update
[2026-02-12 17:17:41] 2026-02-12 22:16:41,872 | INFO     | total number of processed events: 400 (read)
[2026-02-12 17:17:41] 2026-02-12 22:16:41,899 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7012955796/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 17:17:41] 2026-02-12 22:16:41,900 | INFO     | extracted standard info from prmon json
[2026-02-12 17:17:41] 2026-02-12 22:16:41,900 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 17:17:41] 2026-02-12 22:16:41,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 17:17:41] 2026-02-12 22:16:41,900 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 17:17:41] 2026-02-12 22:16:41,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 17:17:41] 2026-02-12 22:16:41,902 | INFO     | fitting pss+swap vs Time
[2026-02-12 17:17:41] 2026-02-12 22:16:41,903 | INFO     | sum of square deviations: 183761585.0
[2026-02-12 17:17:41] 2026-02-12 22:16:41,903 | INFO     | sum of deviations: -8331460367.500001
[2026-02-12 17:17:41] 2026-02-12 22:16:41,903 | INFO     | mean x: 1770931920.5
[2026-02-12 17:17:41] 2026-02-12 22:16:41,903 | INFO     | mean y: 2820434.726190476
[2026-02-12 17:17:41] 2026-02-12 22:16:41,903 | INFO     | intersect: 80294079944.6309
[2026-02-12 17:17:41] 2026-02-12 22:16:41,904 | INFO     | chi2: 0.2311480023283616
[2026-02-12 17:17:41] 2026-02-12 22:16:41,904 | INFO     | current memory leak: -45.34 B/s (using 84 data points, chi2=0.23)
[2026-02-12 17:17:41] 2026-02-12 22:16:41,904 | INFO     | could have reported an average CPU frequency of 3019 MHz (7 samples)
[2026-02-12 17:17:41] 2026-02-12 22:16:41,904 | INFO     | ..............................
[2026-02-12 17:17:41] 2026-02-12 22:16:41,904 | INFO     | . Timing measurements:
[2026-02-12 17:17:41] 2026-02-12 22:16:41,904 | INFO     | . get job = 0 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | . initial setup = 6 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | . payload setup = 4 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | . stage-in = 0 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | . payload execution = 5512 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | . stage-out = 0 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | . log creation = 0 s
[2026-02-12 17:17:41] 2026-02-12 22:16:41,905 | INFO     | ..............................
[2026-02-12 17:17:41] 2026-02-12 22:16:42,446 | INFO     | 
[2026-02-12 17:17:41] 2026-02-12 22:16:42,446 | INFO     | job summary report
[2026-02-12 17:17:41] 2026-02-12 22:16:42,446 | INFO     | --------------------------------------------------
[2026-02-12 17:17:41] 2026-02-12 22:16:42,446 | INFO     | PanDA job id: 7012955796
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | task id: 48431096
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | errors: (none)
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | pilot state: finished 
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | transexitcode: 0
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | exeerrorcode: 0
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | exeerrordiag: 
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | exitcode: 0
[2026-02-12 17:17:41] 2026-02-12 22:16:42,447 | INFO     | exitmsg: OK
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | cpuconsumptiontime: 59421 s
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | nevents: 400
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | neventsw: 0
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | pid: 3067455
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | pgrp: 3067455
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | corecount: 12
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | event service: False
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | sizes: {0: 2281958, 1: 2282248, 11: 2282248, 5520: 2308901, 5521: 2317913, 5524: 2317969, 5525: 2318291}
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | --------------------------------------------------
[2026-02-12 17:17:41] 2026-02-12 22:16:42,448 | INFO     | 
[2026-02-12 17:17:41] 2026-02-12 22:16:42,449 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-02-12 17:17:41] 2026-02-12 22:16:42,467 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 17:17:41] 2026-02-12 22:16:42,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,470 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 17:17:41] 2026-02-12 22:16:42,470 | INFO     | job 7012955796 has completed (purged errors)
[2026-02-12 17:17:41] 2026-02-12 22:16:42,470 | INFO     | overall cleanup function is called
[2026-02-12 17:17:41] 2026-02-12 22:16:43,478 | INFO     | --- collectZombieJob: --- 10, [3067455]
[2026-02-12 17:17:41] 2026-02-12 22:16:43,478 | INFO     | zombie collector waiting for pid 3067455
[2026-02-12 17:17:41] 2026-02-12 22:16:43,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 17:17:41] 2026-02-12 22:16:43,479 | INFO     | collected zombie processes
[2026-02-12 17:17:41] 2026-02-12 22:16:43,479 | INFO     | will attempt to kill all subprocesses of pid=3067455
[2026-02-12 17:17:41] 2026-02-12 22:16:43,712 | INFO     | process IDs to be killed: [3067455] (in reverse order)
[2026-02-12 17:17:41] 2026-02-12 22:16:43,782 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 17:17:41] 2026-02-12 22:16:43,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 17:17:41] 2026-02-12 22:16:43,788 | INFO     | did not find any defunct processes belonging to 3067455
[2026-02-12 17:17:41] 2026-02-12 22:16:43,794 | INFO     | did not find any defunct processes belonging to 3067455
[2026-02-12 17:17:41] 2026-02-12 22:16:43,794 | INFO     | ready for new job
[2026-02-12 17:17:41] 2026-02-12 22:16:43,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 17:17:41] 2026-02-12 22:16:43,796 | INFO     | **************************************
[2026-02-12 17:17:41] 2026-02-12 22:16:43,796 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 17:17:41] 2026-02-12 22:16:43,796 | INFO     | **************************************
[2026-02-12 17:17:41] 2026-02-12 22:16:43,796 | INFO     | 
[2026-02-12 17:17:41] 2026-02-12 22:16:43,817 | INFO     | architecture information:
[2026-02-12 17:17:41] 2026-02-12 22:16:43,818 | INFO     | executing command: cat /etc/os-release
[2026-02-12 17:17:41] 2026-02-12 22:16:43,832 | INFO     | cat /etc/os-release:
[2026-02-12 17:17:41] NAME="CentOS Linux"
[2026-02-12 17:17:41] VERSION="7 (Core)"
[2026-02-12 17:17:41] ID="centos"
[2026-02-12 17:17:41] ID_LIKE="rhel fedora"
[2026-02-12 17:17:41] VERSION_ID="7"
[2026-02-12 17:17:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 17:17:41] ANSI_COLOR="0;31"
[2026-02-12 17:17:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 17:17:41] HOME_URL="https://www.centos.org/"
[2026-02-12 17:17:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 17:17:41] 
[2026-02-12 17:17:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 17:17:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 17:17:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 17:17:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 17:17:41] 
[2026-02-12 17:17:41] 2026-02-12 22:16:43,832 | INFO     | **************************************
[2026-02-12 17:17:41] 2026-02-12 22:16:44,334 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-02-12 17:17:41] 2026-02-12 22:16:44,348 | INFO     | sufficient remaining disk space (372580024320 B)
[2026-02-12 17:17:41] 2026-02-12 22:16:44,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 17:17:41] 2026-02-12 22:16:44,349 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 17:17:41] 2026-02-12 22:16:44,349 | INFO     | update_server=False
[2026-02-12 17:17:41] 2026-02-12 22:16:44,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 17:17:41] 2026-02-12 22:16:44,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 17:17:41] 2026-02-12 22:16:44,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 17:17:41] 2026-02-12 22:16:44,350 | INFO     | aborting loop
[2026-02-12 17:17:41] 2026-02-12 22:16:44,727 | INFO     | all data control threads have been joined
[2026-02-12 17:17:41] 2026-02-12 22:16:45,194 | INFO     | all job control threads have been joined
[2026-02-12 17:17:41] 2026-02-12 22:16:45,350 | INFO     | [job] retrieve thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:45,351 | INFO     | [job] job monitor thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:45,358 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:45,406 | INFO     | all payload control threads have been joined
[2026-02-12 17:17:41] 2026-02-12 22:16:45,578 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:45,646 | INFO     | [data] copytool_in thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:45,733 | INFO     | [data] control thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,155 | INFO     | [payload] validate_post thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,198 | INFO     | [job] control thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,230 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,351 | INFO     | [data] copytool_out thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,410 | INFO     | [payload] control thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,562 | INFO     | [job] validate thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,710 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,786 | INFO     | [payload] failed_post thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:46,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 17:17:41] 2026-02-12 22:16:46,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 17:17:41] 2026-02-12 22:16:48,003 | INFO     | [job] queue monitor thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:16:50,955 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 17:17:41] 2026-02-12 22:17:13,945 | INFO     | PID=3062632 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 17:17:41] 2026-02-12 22:17:13,945 | INFO     | .. there are 3 such processes running
[2026-02-12 17:17:41] 2026-02-12 22:17:13,945 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 17:17:41] 2026-02-12 22:17:13,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 17:17:41] 2026-02-12 22:17:13,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 17:17:41] 2026-02-12 22:17:33,930 | INFO     | [monitor] cgroup control has ended
[2026-02-12 17:17:41] 2026-02-12 22:17:35,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778134128448)>', '<ExcThread(monitor, started 139777563162368)>']
[2026-02-12 17:17:41] 2026-02-12 22:17:36,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 17:17:41] 2026-02-12 22:17:36,038 | INFO     | [monitor] control thread has ended
[2026-02-12 17:17:41] 2026-02-12 22:17:41,010 | INFO     | all workflow threads have been joined
[2026-02-12 17:17:41] 2026-02-12 22:17:41,010 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 17:17:41] 2026-02-12 22:17:41,011 | INFO     | traces error code: 0
[2026-02-12 17:17:41] 2026-02-12 22:17:41,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 17:17:41] 2026-02-12 22:17:41,104 [wrapper] ==== pilot stdout END ====
[2026-02-12 17:17:41] 2026-02-12 22:17:41,105 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 17:17:41] 2026-02-12 22:17:41,106 [wrapper] pilotpid: 3062632
[2026-02-12 17:17:41] 2026-02-12 22:17:41,108 [wrapper] Pilot exit status: 0
[2026-02-12 17:17:41] 2026-02-12 22:17:41,115 [wrapper] pandaids: 7012955796
[2026-02-12 17:17:41] 2026-02-12 22:17:41,144 [wrapper] cleanup supervisor_pilot 3117521 3062633
[2026-02-12 17:17:41] 2026-02-12 22:17:41,146 [wrapper] Test setup, not cleaning
[2026-02-12 17:17:41] 2026-02-12 22:17:41,148 [wrapper] apfmon messages muted
[2026-02-12 17:17:41] 2026-02-12 22:17:41,149 [wrapper] ==== wrapper stdout END ====
[2026-02-12 17:17:41] 2026-02-12 22:17:41,151 [wrapper] ==== wrapper stderr END ====
[2026-02-12 17:17:41]  *** Error codes and diagnostics ***
[2026-02-12 17:17:41]     "exeErrorCode": 0,
[2026-02-12 17:17:41]     "exeErrorDiag": "",
[2026-02-12 17:17:41]     "pilotErrorCode": 0,
[2026-02-12 17:17:41]     "pilotErrorDiag": "",
[2026-02-12 17:17:41]  *** Listing of results directory ***
[2026-02-12 17:17:41] total 939756
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc    584627 Feb 11 19:45 pilot3.tar.gz
[2026-02-12 17:17:41] -rwx------ 1 boinc boinc     36322 Feb 11 19:47 runpilot2-wrapper.sh
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc      5111 Feb 11 19:47 queuedata.json
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc       100 Feb 12 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 17:17:41] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 15:44 run_atlas
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc       105 Feb 12 15:44 job.xml
[2026-02-12 17:17:41] -rw-r--r-- 2 boinc boinc 675234654 Feb 12 15:44 EVNT.48431094._000151.pool.root.1
[2026-02-12 17:17:41] -rw-r--r-- 2 boinc boinc     15845 Feb 12 15:44 start_atlas.sh
[2026-02-12 17:17:41] drwxrwx--x 2 boinc boinc      4096 Feb 12 15:44 shared
[2026-02-12 17:17:41] -rw-r--r-- 2 boinc boinc    597963 Feb 12 15:44 input.tar.gz
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc      7579 Feb 12 15:44 init_data.xml
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc         0 Feb 12 15:44 boinc_lockfile
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc      2555 Feb 12 15:44 pandaJob.out
[2026-02-12 17:17:41] -rw------- 1 boinc boinc        50 Feb 12 15:44 setup.sh.local
[2026-02-12 17:17:41] -rw------- 1 boinc boinc   1000246 Feb 12 15:44 agis_schedconf.cvmfs.json
[2026-02-12 17:17:41] -rw------- 1 boinc boinc   1512955 Feb 12 15:44 agis_ddmendpoints.agis.ALL.json
[2026-02-12 17:17:41] -rw------- 1 boinc boinc       429 Feb 12 15:44 workernode_map.json
[2026-02-12 17:17:41] drwx------ 5 boinc boinc      4096 Feb 12 15:44 pilot3
[2026-02-12 17:17:41] -rw------- 1 boinc boinc 280689433 Feb 12 17:15 HITS.48431096._034651.pool.root.1
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc       530 Feb 12 17:16 boinc_task_state.xml
[2026-02-12 17:17:41] -rw------- 1 boinc boinc      1022 Feb 12 17:16 memory_monitor_summary.json
[2026-02-12 17:17:41] -rw------- 1 boinc boinc    407330 Feb 12 17:16 log.48431096._034651.job.log.tgz.1
[2026-02-12 17:17:41] -rw------- 1 boinc boinc        95 Feb 12 17:16 pilot_heartbeat.json
[2026-02-12 17:17:41] -rw------- 1 boinc boinc      6332 Feb 12 17:16 heartbeat.json
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc        27 Feb 12 17:17 wrapper_checkpoint.txt
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc      8192 Feb 12 17:17 boinc_mmap_file
[2026-02-12 17:17:41] -rw------- 1 boinc boinc      4827 Feb 12 17:17 pilotlog.txt
[2026-02-12 17:17:41] -rw------- 1 boinc boinc    818022 Feb 12 17:17 log.48431096._034651.job.log.1
[2026-02-12 17:17:41] -rw------- 1 boinc boinc       357 Feb 12 17:17 output.list
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc       620 Feb 12 17:17 runtime_log
[2026-02-12 17:17:41] -rw------- 1 boinc boinc   1239040 Feb 12 17:17 result.tar.gz
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc      9403 Feb 12 17:17 runtime_log.err
[2026-02-12 17:17:41] -rw------- 1 boinc boinc       651 Feb 12 17:17 6cVLDmV2ZA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQHlKDmivl1fn.diag
[2026-02-12 17:17:41] -rw-r--r-- 1 boinc boinc     21345 Feb 12 17:17 stderr.txt
[2026-02-12 17:17:41] HITS file was successfully produced:
[2026-02-12 17:17:41] -rw------- 1 boinc boinc 280689433 Feb 12 17:15 shared/HITS.pool.root.1
[2026-02-12 17:17:41]  *** Contents of shared directory: ***
[2026-02-12 17:17:41] total 935344
[2026-02-12 17:17:41] -rw-r--r-- 2 boinc boinc 675234654 Feb 12 15:44 ATLAS.root_0
[2026-02-12 17:17:41] -rw-r--r-- 2 boinc boinc     15845 Feb 12 15:44 start_atlas.sh
[2026-02-12 17:17:41] -rw-r--r-- 2 boinc boinc    597963 Feb 12 15:44 input.tar.gz
[2026-02-12 17:17:41] -rw------- 1 boinc boinc 280689433 Feb 12 17:15 HITS.pool.root.1
[2026-02-12 17:17:41] -rw------- 1 boinc boinc   1239040 Feb 12 17:17 result.tar.gz
17:17:42 (3058224): run_atlas exited; CPU time 59520.533864
17:17:42 (3058224): called boinc_finish(0)

</stderr_txt>
]]>

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