Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:16:08 (25626): wrapper (7.7.26015): starting
00:16:08 (25626): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 00:16:08] Arguments: --nthreads 12
[2026-02-12 00:16:08] Threads: 12
[2026-02-12 00:16:08] Checking for CVMFS
[2026-02-12 00:16:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 00:16:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 00:16:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 00:16:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 00:16:08] 2.11.2.0 2945 399570 98116 156140 1 50 18277282 20275200 1 130560 2 173470470 99.948 24171398 17852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-12 00:16:08] CVMFS is ok
[2026-02-12 00:16:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 00:16:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 00:16:08] Further information can be found at the LHC@home message board.
[2026-02-12 00:16:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 00:16:08] Checking for apptainer binary...
[2026-02-12 00:16:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 00:16:08] Running /usr/bin/apptainer --version
[2026-02-12 00:16:08] apptainer version 1.3.2-1.el7
[2026-02-12 00:16:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 00:16:10] c-205-2.aglt2.org
[2026-02-12 00:16:10] apptainer works
[2026-02-12 00:16:10] Set ATHENA_PROC_NUMBER=12
[2026-02-12 00:16:10] Set ATHENA_CORE_NUMBER=12
[2026-02-12 00:16:10] Starting ATLAS job with PandaID=7009000590
[2026-02-12 00:16:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 01:36:43]  *** The last 200 lines of the pilot log: ***
[2026-02-12 01:36:43]  mtime=0
[2026-02-12 01:36:43]  protocol_id=None
[2026-02-12 01:36:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 01:36:43]  replicas=None
[2026-02-12 01:36:43]  scope=mc23_13p6TeV
[2026-02-12 01:36:43]  status=None
[2026-02-12 01:36:43]  status_code=0
[2026-02-12 01:36:43]  storage_token=
[2026-02-12 01:36:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7009000590/log.48318018._010224.job.log.tgz.1
[2026-02-12 01:36:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/34/log.48318018._010224.job.log.tgz.1
[2026-02-12 01:36:43]  workdir=None
[2026-02-12 01:36:43] ]
[2026-02-12 01:36:43] 2026-02-12 06:35:53,375 | INFO     | transferring file log.48318018._010224.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7009000590/log.48318018._010224.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-12 01:36:43] 2026-02-12 06:35:53,375 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7009000590/log.48318018._010224.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318018._010224.job
[2026-02-12 01:36:43] 2026-02-12 06:35:53,397 | INFO     | adding to output.list: log.48318018._010224.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/34/log.48318018._010224.job.log.tg
[2026-02-12 01:36:43] 2026-02-12 06:35:53,398 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 01:36:43] 2026-02-12 06:35:53,398 | INFO     | summary of transferred files:
[2026-02-12 01:36:43] 2026-02-12 06:35:53,398 | INFO     |  -- lfn=log.48318018._010224.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 01:36:43] 2026-02-12 06:35:53,399 | INFO     | stage-out finished correctly
[2026-02-12 01:36:43] 2026-02-12 06:35:53,937 | INFO     | time since job start (4763s) is within the limit (349056.0s)
[2026-02-12 01:36:43] 2026-02-12 06:35:55,078 | WARNING  | process 2311 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 01:36:43] 2026-02-12 06:35:55,078 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009000590/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 01:36:43] 2026-02-12 06:35:55,162 | INFO     | number of running child processes to parent process 2311: 1
[2026-02-12 01:36:43] 2026-02-12 06:35:55,162 | INFO     | maximum number of monitored processes: 6
[2026-02-12 01:36:43] 2026-02-12 06:35:55,681 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 01:36:43] 2026-02-12 06:35:55,943 | INFO     | time since job start (4765s) is within the limit (349056.0s)
[2026-02-12 01:36:43] 2026-02-12 06:35:57,665 | INFO     | monitor loop #362: job 0:7009000590 is in state 'finished'
[2026-02-12 01:36:43] 2026-02-12 06:35:57,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 01:36:43] 2026-02-12 06:35:57,949 | INFO     | time since job start (4767s) is within the limit (349056.0s)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,281 | INFO     | job 7009000590 has state=finished
[2026-02-12 01:36:43] 2026-02-12 06:35:58,281 | INFO     | preparing for final server update for job 7009000590 in state='finished'
[2026-02-12 01:36:43] 2026-02-12 06:35:58,343 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,343 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7009000590/jobReport.json
[2026-02-12 01:36:43] 2026-02-12 06:35:58,345 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-12 01:36:43] 2026-02-12 06:35:58,346 | INFO     | this job has now completed (state=finished)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,346 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,346 | INFO     | log transfer has been attempted: DONE
[2026-02-12 01:36:43] 2026-02-12 06:35:58,346 | INFO     | job 7009000590 has finished - writing final server update
[2026-02-12 01:36:43] 2026-02-12 06:35:58,347 | INFO     | total number of processed events: 400 (read)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,349 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7009000590/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,349 | INFO     | extracted standard info from prmon json
[2026-02-12 01:36:43] 2026-02-12 06:35:58,350 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 01:36:43] 2026-02-12 06:35:58,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 01:36:43] 2026-02-12 06:35:58,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 01:36:43] 2026-02-12 06:35:58,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 01:36:43] 2026-02-12 06:35:58,351 | INFO     | fitting pss+swap vs Time
[2026-02-12 01:36:43] 2026-02-12 06:35:58,352 | INFO     | sum of square deviations: 110960220.0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,352 | INFO     | sum of deviations: -1677811344.0000002
[2026-02-12 01:36:43] 2026-02-12 06:35:58,352 | INFO     | mean x: 1770875855.0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,352 | INFO     | mean y: 2749103.563380282
[2026-02-12 01:36:43] 2026-02-12 06:35:58,352 | INFO     | intersect: 26779873358.85685
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | chi2: 0.02016242165584977
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | current memory leak: -15.12 B/s (using 71 data points, chi2=0.02)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | ..............................
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | . Timing measurements:
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | . get job = 0 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,353 | INFO     | . initial setup = 7 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,354 | INFO     | . payload setup = 7 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,354 | INFO     | . stage-in = 0 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,354 | INFO     | . payload execution = 4739 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,354 | INFO     | . stage-out = 0 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,354 | INFO     | . log creation = 0 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,354 | INFO     | ..............................
[2026-02-12 01:36:43] 2026-02-12 06:35:58,430 | INFO     | 
[2026-02-12 01:36:43] 2026-02-12 06:35:58,431 | INFO     | job summary report
[2026-02-12 01:36:43] 2026-02-12 06:35:58,431 | INFO     | --------------------------------------------------
[2026-02-12 01:36:43] 2026-02-12 06:35:58,431 | INFO     | PanDA job id: 7009000590
[2026-02-12 01:36:43] 2026-02-12 06:35:58,431 | INFO     | task id: 48318018
[2026-02-12 01:36:43] 2026-02-12 06:35:58,431 | INFO     | errors: (none)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | pilot state: finished 
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | transexitcode: 0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | exeerrorcode: 0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | exeerrordiag: 
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | exitcode: 0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | exitmsg: OK
[2026-02-12 01:36:43] 2026-02-12 06:35:58,432 | INFO     | cpuconsumptiontime: 51508 s
[2026-02-12 01:36:43] 2026-02-12 06:35:58,433 | INFO     | nevents: 400
[2026-02-12 01:36:43] 2026-02-12 06:35:58,433 | INFO     | neventsw: 0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,433 | INFO     | pid: 2311
[2026-02-12 01:36:43] 2026-02-12 06:35:58,433 | INFO     | pgrp: 2311
[2026-02-12 01:36:43] 2026-02-12 06:35:58,433 | INFO     | corecount: 12
[2026-02-12 01:36:43] 2026-02-12 06:35:58,433 | INFO     | event service: False
[2026-02-12 01:36:43] 2026-02-12 06:35:58,434 | INFO     | sizes: {0: 2281785, 1: 2282246, 11: 2282246, 4750: 2308381, 4752: 2317379, 4754: 2317435, 4757: 2317757}
[2026-02-12 01:36:43] 2026-02-12 06:35:58,434 | INFO     | --------------------------------------------------
[2026-02-12 01:36:43] 2026-02-12 06:35:58,434 | INFO     | 
[2026-02-12 01:36:43] 2026-02-12 06:35:58,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-12 01:36:43] 2026-02-12 06:35:58,458 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,458 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,458 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,459 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,461 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,461 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 01:36:43] 2026-02-12 06:35:58,461 | INFO     | job 7009000590 has completed (purged errors)
[2026-02-12 01:36:43] 2026-02-12 06:35:58,461 | INFO     | overall cleanup function is called
[2026-02-12 01:36:43] 2026-02-12 06:35:59,470 | INFO     | --- collectZombieJob: --- 10, [2311]
[2026-02-12 01:36:43] 2026-02-12 06:35:59,470 | INFO     | zombie collector waiting for pid 2311
[2026-02-12 01:36:43] 2026-02-12 06:35:59,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 01:36:43] 2026-02-12 06:35:59,470 | INFO     | collected zombie processes
[2026-02-12 01:36:43] 2026-02-12 06:35:59,470 | INFO     | will attempt to kill all subprocesses of pid=2311
[2026-02-12 01:36:43] 2026-02-12 06:35:59,557 | INFO     | process IDs to be killed: [2311] (in reverse order)
[2026-02-12 01:36:43] 2026-02-12 06:35:59,609 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 01:36:43] 2026-02-12 06:35:59,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 01:36:43] 2026-02-12 06:35:59,613 | INFO     | did not find any defunct processes belonging to 2311
[2026-02-12 01:36:43] 2026-02-12 06:35:59,616 | INFO     | did not find any defunct processes belonging to 2311
[2026-02-12 01:36:43] 2026-02-12 06:35:59,617 | INFO     | ready for new job
[2026-02-12 01:36:43] 2026-02-12 06:35:59,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 01:36:43] 2026-02-12 06:35:59,618 | INFO     | **************************************
[2026-02-12 01:36:43] 2026-02-12 06:35:59,618 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 01:36:43] 2026-02-12 06:35:59,619 | INFO     | **************************************
[2026-02-12 01:36:43] 2026-02-12 06:35:59,619 | INFO     | 
[2026-02-12 01:36:43] 2026-02-12 06:35:59,619 | INFO     | architecture information:
[2026-02-12 01:36:43] 2026-02-12 06:35:59,620 | INFO     | executing command: cat /etc/os-release
[2026-02-12 01:36:43] 2026-02-12 06:35:59,634 | INFO     | cat /etc/os-release:
[2026-02-12 01:36:43] NAME="CentOS Linux"
[2026-02-12 01:36:43] VERSION="7 (Core)"
[2026-02-12 01:36:43] ID="centos"
[2026-02-12 01:36:43] ID_LIKE="rhel fedora"
[2026-02-12 01:36:43] VERSION_ID="7"
[2026-02-12 01:36:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 01:36:43] ANSI_COLOR="0;31"
[2026-02-12 01:36:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 01:36:43] HOME_URL="https://www.centos.org/"
[2026-02-12 01:36:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 01:36:43] 
[2026-02-12 01:36:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 01:36:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 01:36:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 01:36:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 01:36:43] 
[2026-02-12 01:36:43] 2026-02-12 06:35:59,635 | INFO     | **************************************
[2026-02-12 01:36:43] 2026-02-12 06:36:00,138 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-12 01:36:43] 2026-02-12 06:36:00,154 | INFO     | sufficient remaining disk space (28869394432 B)
[2026-02-12 01:36:43] 2026-02-12 06:36:00,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 01:36:43] 2026-02-12 06:36:00,155 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 01:36:43] 2026-02-12 06:36:00,155 | INFO     | update_server=False
[2026-02-12 01:36:43] 2026-02-12 06:36:00,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 01:36:43] 2026-02-12 06:36:00,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:36:43] 2026-02-12 06:36:00,168 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-12 01:36:43] 2026-02-12 06:36:00,168 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-12 01:36:43] 2026-02-12 06:36:00,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:36:43] 2026-02-12 06:36:00,168 | INFO     | will abort loop
[2026-02-12 01:36:43] 2026-02-12 06:36:00,718 | INFO     | all data control threads have been joined
[2026-02-12 01:36:43] 2026-02-12 06:36:01,161 | INFO     | [job] retrieve thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,161 | INFO     | [job] queue monitor thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,173 | INFO     | [job] job monitor thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,319 | INFO     | all job control threads have been joined
[2026-02-12 01:36:43] 2026-02-12 06:36:01,435 | INFO     | [data] copytool_in thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 01:36:43] 2026-02-12 06:36:01,593 | INFO     | all payload control threads have been joined
[2026-02-12 01:36:43] 2026-02-12 06:36:01,613 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,723 | INFO     | [data] control thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:01,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 01:36:43] 2026-02-12 06:36:02,186 | INFO     | [payload] failed_post thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:02,274 | INFO     | [job] validate thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:02,274 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:02,324 | INFO     | [job] control thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:02,530 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:02,598 | INFO     | [payload] control thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:02,758 | INFO     | [payload] validate_post thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:03,495 | INFO     | [data] copytool_out thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:05,772 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 01:36:43] 2026-02-12 06:36:31,154 | INFO     | PID=29381 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 01:36:43] 2026-02-12 06:36:31,155 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 01:36:43] 2026-02-12 06:36:31,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 01:36:43] 2026-02-12 06:36:31,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 01:36:43] 2026-02-12 06:36:38,018 | INFO     | [monitor] cgroup control has ended
[2026-02-12 01:36:43] 2026-02-12 06:36:38,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427111597888)>', '<ExcThread(monitor, started 140426665240320)>']
[2026-02-12 01:36:43] 2026-02-12 06:36:38,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 01:36:43] 2026-02-12 06:36:38,191 | INFO     | [monitor] control thread has ended
[2026-02-12 01:36:43] 2026-02-12 06:36:43,132 | INFO     | all workflow threads have been joined
[2026-02-12 01:36:43] 2026-02-12 06:36:43,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 01:36:43] 2026-02-12 06:36:43,143 | INFO     | traces error code: 0
[2026-02-12 01:36:43] 2026-02-12 06:36:43,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 01:36:43] 2026-02-12 06:36:43,241 [wrapper] ==== pilot stdout END ====
[2026-02-12 01:36:43] 2026-02-12 06:36:43,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 01:36:43] 2026-02-12 06:36:43,249 [wrapper] pilotpid: 29381
[2026-02-12 01:36:43] 2026-02-12 06:36:43,253 [wrapper] Pilot exit status: 0
[2026-02-12 01:36:43] 2026-02-12 06:36:43,269 [wrapper] pandaids: 7009000590
[2026-02-12 01:36:43] 2026-02-12 06:36:43,310 [wrapper] cleanup supervisor_pilot 24223 29382
[2026-02-12 01:36:43] 2026-02-12 06:36:43,314 [wrapper] Test setup, not cleaning
[2026-02-12 01:36:43] 2026-02-12 06:36:43,317 [wrapper] apfmon messages muted
[2026-02-12 01:36:43] 2026-02-12 06:36:43,321 [wrapper] ==== wrapper stdout END ====
[2026-02-12 01:36:43] 2026-02-12 06:36:43,325 [wrapper] ==== wrapper stderr END ====
[2026-02-12 01:36:43]  *** Error codes and diagnostics ***
[2026-02-12 01:36:43]     "exeErrorCode": 0,
[2026-02-12 01:36:43]     "exeErrorDiag": "",
[2026-02-12 01:36:43]     "pilotErrorCode": 0,
[2026-02-12 01:36:43]     "pilotErrorDiag": "",
[2026-02-12 01:36:43]  *** Listing of results directory ***
[2026-02-12 01:36:43] total 668224
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas    584627 Feb 11 17:33 pilot3.tar.gz
[2026-02-12 01:36:43] -rwx------ 1 boincer umatlas     36322 Feb 11 17:34 runpilot2-wrapper.sh
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas      5111 Feb 11 17:35 queuedata.json
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas       100 Feb 12 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 01:36:43] -rwxr-xr-x 1 boincer umatlas      7986 Feb 12 00:16 run_atlas
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas       105 Feb 12 00:16 job.xml
[2026-02-12 01:36:43] -rw-r--r-- 2 boincer umatlas 491674969 Feb 12 00:16 EVNT.48318016._000201.pool.root.1
[2026-02-12 01:36:43] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 00:16 start_atlas.sh
[2026-02-12 01:36:43] drwxrwx--x 2 boincer umatlas      4096 Feb 12 00:16 shared
[2026-02-12 01:36:43] -rw-r--r-- 2 boincer umatlas    597945 Feb 12 00:16 input.tar.gz
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas         0 Feb 12 00:16 boinc_lockfile
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas      2522 Feb 12 00:16 pandaJob.out
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas        57 Feb 12 00:16 setup.sh.local
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas   1005065 Feb 12 00:16 agis_schedconf.cvmfs.json
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas   1512955 Feb 12 00:16 agis_ddmendpoints.agis.ALL.json
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas       433 Feb 12 00:16 workernode_map.json
[2026-02-12 01:36:43] drwx------ 5 boincer umatlas      4096 Feb 12 00:16 pilot3
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas      5952 Feb 12 01:31 init_data.xml
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas 186467135 Feb 12 01:35 HITS.48318018._010224.pool.root.1
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas       531 Feb 12 01:35 boinc_task_state.xml
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas      1058 Feb 12 01:35 memory_monitor_summary.json
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas    398984 Feb 12 01:35 log.48318018._010224.job.log.tgz.1
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas      6406 Feb 12 01:35 heartbeat.json
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas        95 Feb 12 01:36 pilot_heartbeat.json
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas      8192 Feb 12 01:36 boinc_mmap_file
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas        27 Feb 12 01:36 wrapper_checkpoint.txt
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas      4928 Feb 12 01:36 pilotlog.txt
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas    691134 Feb 12 01:36 log.48318018._010224.job.log.1
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas       357 Feb 12 01:36 output.list
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas       620 Feb 12 01:36 runtime_log
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas   1105920 Feb 12 01:36 result.tar.gz
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas      9338 Feb 12 01:36 runtime_log.err
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas       658 Feb 12 01:36 hULODmlxXA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmH8kKDmXwqDXo.diag
[2026-02-12 01:36:43] -rw-r--r-- 1 boincer umatlas     21726 Feb 12 01:36 stderr.txt
[2026-02-12 01:36:43] HITS file was successfully produced:
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas 186467135 Feb 12 01:35 shared/HITS.pool.root.1
[2026-02-12 01:36:43]  *** Contents of shared directory: ***
[2026-02-12 01:36:43] total 663940
[2026-02-12 01:36:43] -rw-r--r-- 2 boincer umatlas 491674969 Feb 12 00:16 ATLAS.root_0
[2026-02-12 01:36:43] -rw-r--r-- 2 boincer umatlas     15845 Feb 12 00:16 start_atlas.sh
[2026-02-12 01:36:43] -rw-r--r-- 2 boincer umatlas    597945 Feb 12 00:16 input.tar.gz
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas 186467135 Feb 12 01:35 HITS.pool.root.1
[2026-02-12 01:36:43] -rw------- 1 boincer umatlas   1105920 Feb 12 01:36 result.tar.gz
01:36:45 (25626): run_atlas exited; CPU time 51493.118974
01:36:45 (25626): called boinc_finish(0)

</stderr_txt>
]]>

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