Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
13:19:27 (2959367): wrapper (7.7.26015): starting
13:19:27 (2959367): wrapper: running run_atlas (--nthreads 12)
[2026-02-12 13:19:27] Arguments: --nthreads 12
[2026-02-12 13:19:27] Threads: 12
[2026-02-12 13:19:27] Checking for CVMFS
[2026-02-12 13:19:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 13:19:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 13:19:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 13:19:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 13:19:38] 2.12.7.0 5265 4208 74436 156166 0 188 3946728 4194304 1834 130560 0 6017617 99.995 135127 130 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-12 13:19:38] CVMFS is ok
[2026-02-12 13:19:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 13:19:38] Checking for apptainer binary...
[2026-02-12 13:19:38] apptainer is not installed, using version from CVMFS
[2026-02-12 13:19:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 13:19:38] Trebeth
[2026-02-12 13:19:38] apptainer works
[2026-02-12 13:19:38] Set ATHENA_PROC_NUMBER=12
[2026-02-12 13:19:38] Set ATHENA_CORE_NUMBER=12
[2026-02-12 13:19:38] Starting ATLAS job with PandaID=7009000620
[2026-02-12 13:19:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 14:28:02]  *** The last 200 lines of the pilot log: ***
[2026-02-12 14:28:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 14:28:02]  is_altstaged=None
[2026-02-12 14:28:02]  is_tar=False
[2026-02-12 14:28:02]  lfn=log.48318018._010254.job.log.tgz.1
[2026-02-12 14:28:02]  mtime=0
[2026-02-12 14:28:02]  protocol_id=None
[2026-02-12 14:28:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 14:28:02]  replicas=None
[2026-02-12 14:28:02]  scope=mc23_13p6TeV
[2026-02-12 14:28:02]  status=None
[2026-02-12 14:28:02]  status_code=0
[2026-02-12 14:28:02]  storage_token=
[2026-02-12 14:28:02]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-7009000620/log.48318018._010254.job.log.tgz.1
[2026-02-12 14:28:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/df/log.48318018._010254.job.log.tgz.1
[2026-02-12 14:28:02]  workdir=None
[2026-02-12 14:28:02] ]
[2026-02-12 14:28:02] 2026-02-12 19:27:23,917 | INFO     | transferring file log.48318018._010254.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-7009000620/log.48318018._010254.job.log.tgz.1 to /var/lib/boinc
[2026-02-12 14:28:02] 2026-02-12 19:27:23,917 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-7009000620/log.48318018._010254.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.483180
[2026-02-12 14:28:02] 2026-02-12 19:27:23,932 | INFO     | adding to output.list: log.48318018._010254.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/df/log.48318018._010254.job.log.tg
[2026-02-12 14:28:02] 2026-02-12 19:27:23,933 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 14:28:02] 2026-02-12 19:27:23,933 | INFO     | summary of transferred files:
[2026-02-12 14:28:02] 2026-02-12 19:27:23,933 | INFO     |  -- lfn=log.48318018._010254.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 14:28:02] 2026-02-12 19:27:23,933 | INFO     | stage-out finished correctly
[2026-02-12 14:28:02] 2026-02-12 19:27:24,943 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 14:28:02] 2026-02-12 19:27:25,215 | INFO     | time since job start (4055s) is within the limit (349056.0s)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,553 | INFO     | job 7009000620 has state=finished
[2026-02-12 14:28:02] 2026-02-12 19:27:25,553 | INFO     | preparing for final server update for job 7009000620 in state='finished'
[2026-02-12 14:28:02] 2026-02-12 19:27:25,554 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-7009000620/jobReport.json
[2026-02-12 14:28:02] 2026-02-12 19:27:25,558 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-02-12 14:28:02] 2026-02-12 19:27:25,558 | INFO     | this job has now completed (state=finished)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,558 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,559 | INFO     | log transfer has been attempted: DONE
[2026-02-12 14:28:02] 2026-02-12 19:27:25,559 | INFO     | job 7009000620 has finished - writing final server update
[2026-02-12 14:28:02] 2026-02-12 19:27:25,559 | INFO     | total number of processed events: 400 (read)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,593 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-7009000620/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,594 | INFO     | extracted standard info from prmon json
[2026-02-12 14:28:02] 2026-02-12 19:27:25,594 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 14:28:02] 2026-02-12 19:27:25,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 14:28:02] 2026-02-12 19:27:25,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 14:28:02] 2026-02-12 19:27:25,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 14:28:02] 2026-02-12 19:27:25,597 | INFO     | fitting pss+swap vs Time
[2026-02-12 14:28:02] 2026-02-12 19:27:25,597 | INFO     | sum of square deviations: 66959395.0
[2026-02-12 14:28:02] 2026-02-12 19:27:25,597 | INFO     | sum of deviations: 590973428.9999998
[2026-02-12 14:28:02] 2026-02-12 19:27:25,597 | INFO     | mean x: 1770922513.5
[2026-02-12 14:28:02] 2026-02-12 19:27:25,598 | INFO     | mean y: 2687770.7
[2026-02-12 14:28:02] 2026-02-12 19:27:25,598 | INFO     | intersect: -15627204797.71991
[2026-02-12 14:28:02] 2026-02-12 19:27:25,598 | INFO     | chi2: 0.15166359240040164
[2026-02-12 14:28:02] 2026-02-12 19:27:25,598 | INFO     | current memory leak: 8.83 B/s (using 60 data points, chi2=0.15)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | could have reported an average CPU frequency of 3073 MHz (6 samples)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | ..............................
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | . Timing measurements:
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | . get job = 0 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | . initial setup = 5 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | . payload setup = 3 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,599 | INFO     | . stage-in = 0 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,600 | INFO     | . payload execution = 4033 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,600 | INFO     | . stage-out = 0 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,600 | INFO     | . log creation = 0 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,600 | INFO     | ..............................
[2026-02-12 14:28:02] 2026-02-12 19:27:25,693 | INFO     | 
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | job summary report
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | --------------------------------------------------
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | PanDA job id: 7009000620
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | task id: 48318018
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | errors: (none)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 14:28:02] 2026-02-12 19:27:25,694 | INFO     | pilot state: finished 
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | transexitcode: 0
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | exeerrorcode: 0
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | exeerrordiag: 
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | exitcode: 0
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | exitmsg: OK
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | cpuconsumptiontime: 41852 s
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | nevents: 400
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | neventsw: 0
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | pid: 2968589
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | pgrp: 2968589
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | corecount: 12
[2026-02-12 14:28:02] 2026-02-12 19:27:25,695 | INFO     | event service: False
[2026-02-12 14:28:02] 2026-02-12 19:27:25,696 | INFO     | sizes: {0: 2281847, 1: 2282251, 11: 2282251, 4041: 2308136, 4042: 2317203, 4043: 2317203, 4044: 2317525}
[2026-02-12 14:28:02] 2026-02-12 19:27:25,696 | INFO     | --------------------------------------------------
[2026-02-12 14:28:02] 2026-02-12 19:27:25,696 | INFO     | 
[2026-02-12 14:28:02] 2026-02-12 19:27:25,696 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-02-12 14:28:02] 2026-02-12 19:27:25,715 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,715 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,715 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,717 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 14:28:02] 2026-02-12 19:27:25,718 | INFO     | job 7009000620 has completed (purged errors)
[2026-02-12 14:28:02] 2026-02-12 19:27:25,718 | INFO     | overall cleanup function is called
[2026-02-12 14:28:02] 2026-02-12 19:27:26,010 | WARNING  | process 2968589 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 14:28:02] 2026-02-12 19:27:26,182 | INFO     | using path: /var/lib/boinc-client/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 14:28:02] 2026-02-12 19:27:26,393 | INFO     | number of running child processes to parent process 2968589: 1
[2026-02-12 14:28:02] 2026-02-12 19:27:26,393 | INFO     | maximum number of monitored processes: 6
[2026-02-12 14:28:02] 2026-02-12 19:27:26,393 | INFO     | aborting job monitoring since job object (job id=7009000620) has expired
[2026-02-12 14:28:02] 2026-02-12 19:27:26,722 | INFO     | --- collectZombieJob: --- 10, [2968589]
[2026-02-12 14:28:02] 2026-02-12 19:27:26,723 | INFO     | zombie collector waiting for pid 2968589
[2026-02-12 14:28:02] 2026-02-12 19:27:26,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 14:28:02] 2026-02-12 19:27:26,723 | INFO     | collected zombie processes
[2026-02-12 14:28:02] 2026-02-12 19:27:26,723 | INFO     | will attempt to kill all subprocesses of pid=2968589
[2026-02-12 14:28:02] 2026-02-12 19:27:26,956 | INFO     | process IDs to be killed: [2968589] (in reverse order)
[2026-02-12 14:28:02] 2026-02-12 19:27:27,019 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 14:28:02] 2026-02-12 19:27:27,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 14:28:02] 2026-02-12 19:27:27,026 | INFO     | did not find any defunct processes belonging to 2968589
[2026-02-12 14:28:02] 2026-02-12 19:27:27,032 | INFO     | did not find any defunct processes belonging to 2968589
[2026-02-12 14:28:02] 2026-02-12 19:27:27,032 | INFO     | ready for new job
[2026-02-12 14:28:02] 2026-02-12 19:27:27,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 14:28:02] 2026-02-12 19:27:27,034 | INFO     | **************************************
[2026-02-12 14:28:02] 2026-02-12 19:27:27,034 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 14:28:02] 2026-02-12 19:27:27,034 | INFO     | **************************************
[2026-02-12 14:28:02] 2026-02-12 19:27:27,034 | INFO     | 
[2026-02-12 14:28:02] 2026-02-12 19:27:27,057 | INFO     | architecture information:
[2026-02-12 14:28:02] 2026-02-12 19:27:27,058 | INFO     | executing command: cat /etc/os-release
[2026-02-12 14:28:02] 2026-02-12 19:27:27,071 | INFO     | cat /etc/os-release:
[2026-02-12 14:28:02] NAME="CentOS Linux"
[2026-02-12 14:28:02] VERSION="7 (Core)"
[2026-02-12 14:28:02] ID="centos"
[2026-02-12 14:28:02] ID_LIKE="rhel fedora"
[2026-02-12 14:28:02] VERSION_ID="7"
[2026-02-12 14:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 14:28:02] ANSI_COLOR="0;31"
[2026-02-12 14:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 14:28:02] HOME_URL="https://www.centos.org/"
[2026-02-12 14:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 14:28:02] 
[2026-02-12 14:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 14:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 14:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 14:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 14:28:02] 
[2026-02-12 14:28:02] 2026-02-12 19:27:27,072 | INFO     | **************************************
[2026-02-12 14:28:02] 2026-02-12 19:27:27,575 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-02-12 14:28:02] 2026-02-12 19:27:27,590 | INFO     | sufficient remaining disk space (374318563328 B)
[2026-02-12 14:28:02] 2026-02-12 19:27:27,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 14:28:02] 2026-02-12 19:27:27,591 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 14:28:02] 2026-02-12 19:27:27,591 | INFO     | update_server=False
[2026-02-12 14:28:02] 2026-02-12 19:27:27,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 14:28:02] 2026-02-12 19:27:27,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 14:28:02] 2026-02-12 19:27:27,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 14:28:02] 2026-02-12 19:27:27,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 14:28:02] 2026-02-12 19:27:27,592 | INFO     | aborting loop
[2026-02-12 14:28:02] 2026-02-12 19:27:28,069 | INFO     | all job control threads have been joined
[2026-02-12 14:28:02] 2026-02-12 19:27:28,555 | INFO     | all data control threads have been joined
[2026-02-12 14:28:02] 2026-02-12 19:27:28,594 | INFO     | [job] job monitor thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:28,595 | INFO     | [job] retrieve thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:28,597 | INFO     | [job] queue monitor thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:28,638 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:28,862 | INFO     | all payload control threads have been joined
[2026-02-12 14:28:02] 2026-02-12 19:27:29,050 | INFO     | [payload] validate_post thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,074 | INFO     | [job] control thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,310 | INFO     | [job] validate thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,427 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,558 | INFO     | [data] control thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,594 | INFO     | [data] copytool_out thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,618 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,782 | INFO     | [data] copytool_in thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:29,866 | INFO     | [payload] control thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:30,146 | INFO     | [payload] failed_post thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:31,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 14:28:02] 2026-02-12 19:27:35,039 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:38,434 | INFO     | job.realtimelogging is not enabled
[2026-02-12 14:28:02] 2026-02-12 19:27:39,438 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 14:28:02] 2026-02-12 19:27:56,870 | INFO     | [monitor] cgroup control has ended
[2026-02-12 14:28:02] 2026-02-12 19:27:57,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343289583424)>', '<ExcThread(monitor, started 140342837876480)>']
[2026-02-12 14:28:02] 2026-02-12 19:27:58,537 | INFO     | PID=2963773 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 14:28:02] 2026-02-12 19:27:58,537 | INFO     | .. there are 3 such processes running
[2026-02-12 14:28:02] 2026-02-12 19:27:58,538 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 14:28:02] 2026-02-12 19:27:58,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 14:28:02] 2026-02-12 19:27:58,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 14:28:02] 2026-02-12 19:27:58,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 14:28:02] 2026-02-12 19:27:58,538 | INFO     | [monitor] control thread has ended
[2026-02-12 14:28:02] 2026-02-12 19:28:02,082 | INFO     | all workflow threads have been joined
[2026-02-12 14:28:02] 2026-02-12 19:28:02,083 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 14:28:02] 2026-02-12 19:28:02,083 | INFO     | traces error code: 0
[2026-02-12 14:28:02] 2026-02-12 19:28:02,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 14:28:02] 2026-02-12 19:28:02,197 [wrapper] ==== pilot stdout END ====
[2026-02-12 14:28:02] 2026-02-12 19:28:02,199 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 14:28:02] 2026-02-12 19:28:02,201 [wrapper] pilotpid: 2963773
[2026-02-12 14:28:02] 2026-02-12 19:28:02,202 [wrapper] Pilot exit status: 0
[2026-02-12 14:28:02] 2026-02-12 19:28:02,209 [wrapper] pandaids: 7009000620
[2026-02-12 14:28:02] 2026-02-12 19:28:02,249 [wrapper] cleanup supervisor_pilot 3013797 2963774
[2026-02-12 14:28:02] 2026-02-12 19:28:02,251 [wrapper] Test setup, not cleaning
[2026-02-12 14:28:02] 2026-02-12 19:28:02,253 [wrapper] apfmon messages muted
[2026-02-12 14:28:02] 2026-02-12 19:28:02,255 [wrapper] ==== wrapper stdout END ====
[2026-02-12 14:28:02] 2026-02-12 19:28:02,257 [wrapper] ==== wrapper stderr END ====
[2026-02-12 14:28:02]  *** Error codes and diagnostics ***
[2026-02-12 14:28:02]     "exeErrorCode": 0,
[2026-02-12 14:28:02]     "exeErrorDiag": "",
[2026-02-12 14:28:02]     "pilotErrorCode": 0,
[2026-02-12 14:28:02]     "pilotErrorDiag": "",
[2026-02-12 14:28:02]  *** Listing of results directory ***
[2026-02-12 14:28:02] total 673920
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc    584627 Feb 11 17:33 pilot3.tar.gz
[2026-02-12 14:28:02] -rwx------ 1 boinc boinc     36322 Feb 11 17:34 runpilot2-wrapper.sh
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc      5111 Feb 11 17:36 queuedata.json
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc       100 Feb 12 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 14:28:02] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 13:19 run_atlas
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc       105 Feb 12 13:19 job.xml
[2026-02-12 14:28:02] -rw-r--r-- 2 boinc boinc     15845 Feb 12 13:19 start_atlas.sh
[2026-02-12 14:28:02] drwxrwx--x 2 boinc boinc      4096 Feb 12 13:19 shared
[2026-02-12 14:28:02] -rw-r--r-- 2 boinc boinc    597942 Feb 12 13:19 input.tar.gz
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc      7579 Feb 12 13:19 init_data.xml
[2026-02-12 14:28:02] -rw-r--r-- 2 boinc boinc 501515887 Feb 12 13:19 EVNT.48318016._000202.pool.root.1
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc         0 Feb 12 13:19 boinc_lockfile
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc      2521 Feb 12 13:19 pandaJob.out
[2026-02-12 14:28:02] -rw------- 1 boinc boinc        50 Feb 12 13:19 setup.sh.local
[2026-02-12 14:28:02] -rw------- 1 boinc boinc    999510 Feb 12 13:19 agis_schedconf.cvmfs.json
[2026-02-12 14:28:02] -rw------- 1 boinc boinc   1512955 Feb 12 13:19 agis_ddmendpoints.agis.ALL.json
[2026-02-12 14:28:02] -rw------- 1 boinc boinc       429 Feb 12 13:19 workernode_map.json
[2026-02-12 14:28:02] drwx------ 5 boinc boinc      4096 Feb 12 13:19 pilot3
[2026-02-12 14:28:02] -rw------- 1 boinc boinc 182684273 Feb 12 14:26 HITS.48318018._010254.pool.root.1
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc       530 Feb 12 14:27 boinc_task_state.xml
[2026-02-12 14:28:02] -rw------- 1 boinc boinc      1033 Feb 12 14:27 memory_monitor_summary.json
[2026-02-12 14:28:02] -rw------- 1 boinc boinc    365208 Feb 12 14:27 log.48318018._010254.job.log.tgz.1
[2026-02-12 14:28:02] -rw------- 1 boinc boinc      6339 Feb 12 14:27 heartbeat.json
[2026-02-12 14:28:02] -rw------- 1 boinc boinc        95 Feb 12 14:27 pilot_heartbeat.json
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc      8192 Feb 12 14:28 boinc_mmap_file
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc        27 Feb 12 14:28 wrapper_checkpoint.txt
[2026-02-12 14:28:02] -rw------- 1 boinc boinc      4899 Feb 12 14:28 pilotlog.txt
[2026-02-12 14:28:02] -rw------- 1 boinc boinc    613201 Feb 12 14:28 log.48318018._010254.job.log.1
[2026-02-12 14:28:02] -rw------- 1 boinc boinc       357 Feb 12 14:28 output.list
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc       620 Feb 12 14:28 runtime_log
[2026-02-12 14:28:02] -rw------- 1 boinc boinc    993280 Feb 12 14:28 result.tar.gz
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc      9403 Feb 12 14:28 runtime_log.err
[2026-02-12 14:28:02] -rw------- 1 boinc boinc       650 Feb 12 14:28 dA6MDmyxXA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmW8kKDmp9IS9m.diag
[2026-02-12 14:28:02] -rw-r--r-- 1 boinc boinc     21176 Feb 12 14:28 stderr.txt
[2026-02-12 14:28:02] HITS file was successfully produced:
[2026-02-12 14:28:02] -rw------- 1 boinc boinc 182684273 Feb 12 14:26 shared/HITS.pool.root.1
[2026-02-12 14:28:02]  *** Contents of shared directory: ***
[2026-02-12 14:28:02] total 669748
[2026-02-12 14:28:02] -rw-r--r-- 2 boinc boinc     15845 Feb 12 13:19 start_atlas.sh
[2026-02-12 14:28:02] -rw-r--r-- 2 boinc boinc    597942 Feb 12 13:19 input.tar.gz
[2026-02-12 14:28:02] -rw-r--r-- 2 boinc boinc 501515887 Feb 12 13:19 ATLAS.root_0
[2026-02-12 14:28:02] -rw------- 1 boinc boinc 182684273 Feb 12 14:26 HITS.pool.root.1
[2026-02-12 14:28:02] -rw------- 1 boinc boinc    993280 Feb 12 14:28 result.tar.gz
14:28:03 (2959367): run_atlas exited; CPU time 41908.373975
14:28:03 (2959367): called boinc_finish(0)

</stderr_txt>
]]>

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