Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:40:53 (10492): wrapper (7.7.26015): starting
18:40:53 (10492): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 18:40:53] Arguments: --nthreads 8
[2026-02-12 18:40:53] Threads: 8
[2026-02-12 18:40:53] Checking for CVMFS
[2026-02-12 18:40:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 18:40:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 18:40:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 18:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 18:40:53] 2.11.2.0 13917 84670 133944 156166 3 13 20080550 25165825 94 130560 0 28605417 99.840 20198268 3682 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-12 18:40:53] CVMFS is ok
[2026-02-12 18:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 18:40:53] Checking for apptainer binary...
[2026-02-12 18:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 18:40:53] Running /usr/bin/apptainer --version
[2026-02-12 18:40:53] apptainer version 1.3.2-1.el7
[2026-02-12 18:40:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 18:40:55] cg-vwn371.simple-grid.lan
[2026-02-12 18:40:55] apptainer works
[2026-02-12 18:40:55] Set ATHENA_PROC_NUMBER=8
[2026-02-12 18:40:55] Set ATHENA_CORE_NUMBER=8
[2026-02-12 18:40:55] Starting ATLAS job with PandaID=7008983085
[2026-02-12 18:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 22:44:00]  *** The last 200 lines of the pilot log: ***
[2026-02-12 22:44:00] 2026-02-12 21:42:46,328 | INFO     | job 7008983085 has finished - writing final server update
[2026-02-12 22:44:00] 2026-02-12 21:42:46,328 | INFO     | total number of processed events: 400 (read)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,331 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7008983085/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,331 | INFO     | extracted standard info from prmon json
[2026-02-12 22:44:00] 2026-02-12 21:42:46,331 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 22:44:00] 2026-02-12 21:42:46,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 22:44:00] 2026-02-12 21:42:46,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 22:44:00] 2026-02-12 21:42:46,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 22:44:00] 2026-02-12 21:42:46,337 | INFO     | fitting pss+swap vs Time
[2026-02-12 22:44:00] 2026-02-12 21:42:46,338 | INFO     | sum of square deviations: 4127772278.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,340 | INFO     | sum of deviations: -14910689147.000008
[2026-02-12 22:44:00] 2026-02-12 21:42:46,340 | INFO     | mean x: 1770925304.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,340 | INFO     | mean y: 2494150.5864978903
[2026-02-12 22:44:00] 2026-02-12 21:42:46,340 | INFO     | intersect: 6399580746.481431
[2026-02-12 22:44:00] 2026-02-12 21:42:46,341 | INFO     | chi2: 2.4619954096402163
[2026-02-12 22:44:00] 2026-02-12 21:42:46,341 | INFO     | sum of square deviations: 3871990738.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,344 | INFO     | sum of deviations: 1108209448.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,344 | INFO     | mean x: 1770925151.5
[2026-02-12 22:44:00] 2026-02-12 21:42:46,344 | INFO     | mean y: 2503541.2327586208
[2026-02-12 22:44:00] 2026-02-12 21:42:46,344 | INFO     | intersect: -504356138.2939674
[2026-02-12 22:44:00] 2026-02-12 21:42:46,345 | INFO     | chi2: 1.6888515008315452
[2026-02-12 22:44:00] 2026-02-12 21:42:46,345 | INFO     | current chi2=1.6888515008315452 (change=31.403141767906646 %)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,349 | INFO     | sum of square deviations: 3627000098.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,351 | INFO     | sum of deviations: 1162659938.9999948
[2026-02-12 22:44:00] 2026-02-12 21:42:46,352 | INFO     | mean x: 1770924999.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,352 | INFO     | mean y: 2503575.1321585905
[2026-02-12 22:44:00] 2026-02-12 21:42:46,352 | INFO     | intersect: -565178667.9552541
[2026-02-12 22:44:00] 2026-02-12 21:42:46,352 | INFO     | chi2: 1.6890439727547466
[2026-02-12 22:44:00] 2026-02-12 21:42:46,353 | INFO     | current chi2=1.6890439727547466 (change=-0.011396616168242623 %)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,353 | INFO     | right removable region: 226
[2026-02-12 22:44:00] 2026-02-12 21:42:46,353 | INFO     | sum of square deviations: 3871990738.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,355 | INFO     | sum of deviations: -50271510411.499985
[2026-02-12 22:44:00] 2026-02-12 21:42:46,355 | INFO     | mean x: 1770925456.5
[2026-02-12 22:44:00] 2026-02-12 21:42:46,356 | INFO     | mean y: 2515016.7801724137
[2026-02-12 22:44:00] 2026-02-12 21:42:46,356 | INFO     | intersect: 22995105533.77487
[2026-02-12 22:44:00] 2026-02-12 21:42:46,356 | INFO     | chi2: 0.992978075439098
[2026-02-12 22:44:00] 2026-02-12 21:42:46,356 | INFO     | current chi2=0.992978075439098 (change=59.6677527687102 %)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,357 | INFO     | sum of square deviations: 3627000098.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,359 | INFO     | sum of deviations: -51648554209.99999
[2026-02-12 22:44:00] 2026-02-12 21:42:46,359 | INFO     | mean x: 1770925609.0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,359 | INFO     | mean y: 2515853.4713656385
[2026-02-12 22:44:00] 2026-02-12 21:42:46,359 | INFO     | intersect: 25220532078.160686
[2026-02-12 22:44:00] 2026-02-12 21:42:46,360 | INFO     | chi2: 0.9742501014901025
[2026-02-12 22:44:00] 2026-02-12 21:42:46,360 | INFO     | current chi2=0.9742501014901025 (change=1.8860410327502883 %)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,360 | INFO     | left removable region: 20
[2026-02-12 22:44:00] 2026-02-12 21:42:46,360 | INFO     | sum of square deviations: 2710627567.5
[2026-02-12 22:44:00] 2026-02-12 21:42:46,362 | INFO     | sum of deviations: -20701036707.5
[2026-02-12 22:44:00] 2026-02-12 21:42:46,362 | INFO     | mean x: 1770925578.5
[2026-02-12 22:44:00] 2026-02-12 21:42:46,363 | INFO     | mean y: 2516589.6844660193
[2026-02-12 22:44:00] 2026-02-12 21:42:46,363 | INFO     | intersect: 13527058229.534506
[2026-02-12 22:44:00] 2026-02-12 21:42:46,367 | INFO     | chi2: 0.1422377168424975
[2026-02-12 22:44:00] 2026-02-12 21:42:46,368 | INFO     | current memory leak: -7.64 B/s (using 206 data points, chi2=0.14)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,368 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,368 | INFO     | ..............................
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . Timing measurements:
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . get job = 0 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . initial setup = 10 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . payload setup = 10 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . stage-in = 0 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . payload execution = 14457 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . stage-out = 4 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | . log creation = 1 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,369 | INFO     | ..............................
[2026-02-12 22:44:00] 2026-02-12 21:42:46,504 | INFO     | 
[2026-02-12 22:44:00] 2026-02-12 21:42:46,504 | INFO     | job summary report
[2026-02-12 22:44:00] 2026-02-12 21:42:46,504 | INFO     | --------------------------------------------------
[2026-02-12 22:44:00] 2026-02-12 21:42:46,504 | INFO     | PanDA job id: 7008983085
[2026-02-12 22:44:00] 2026-02-12 21:42:46,504 | INFO     | task id: 48442031
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | errors: (none)
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | pilot state: finished 
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | transexitcode: 0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | exeerrorcode: 0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | exeerrordiag: 
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | exitcode: 0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | exitmsg: OK
[2026-02-12 22:44:00] 2026-02-12 21:42:46,505 | INFO     | cpuconsumptiontime: 55961 s
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | nevents: 400
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | neventsw: 0
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | pid: 26206
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | pgrp: 26206
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | corecount: 8
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | event service: False
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | sizes: {0: 2281084, 1: 2282202, 2: 2282202, 14472: 2312948, 14473: 2312947, 14477: 2322001, 14479: 2322185, 14480: 2322379}
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | --------------------------------------------------
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | 
[2026-02-12 22:44:00] 2026-02-12 21:42:46,506 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-12 22:44:00] 2026-02-12 21:42:46,841 | INFO     | time since job start (14482s) is within the limit (349056.0s)
[2026-02-12 22:44:00] 2026-02-12 21:42:47,032 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 22:44:00] 2026-02-12 21:42:47,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,035 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 22:44:00] 2026-02-12 21:42:47,035 | INFO     | job 7008983085 has completed (purged errors)
[2026-02-12 22:44:00] 2026-02-12 21:42:47,035 | INFO     | overall cleanup function is called
[2026-02-12 22:44:00] 2026-02-12 21:42:48,044 | INFO     | --- collectZombieJob: --- 10, [26206]
[2026-02-12 22:44:00] 2026-02-12 21:42:48,044 | INFO     | zombie collector waiting for pid 26206
[2026-02-12 22:44:00] 2026-02-12 21:42:48,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 22:44:00] 2026-02-12 21:42:48,044 | INFO     | collected zombie processes
[2026-02-12 22:44:00] 2026-02-12 21:42:48,045 | INFO     | will attempt to kill all subprocesses of pid=26206
[2026-02-12 22:44:00] 2026-02-12 21:42:48,132 | INFO     | process IDs to be killed: [26206] (in reverse order)
[2026-02-12 22:44:00] 2026-02-12 21:42:49,237 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 22:44:00] 2026-02-12 21:42:49,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 22:44:00] 2026-02-12 21:42:49,240 | INFO     | did not find any defunct processes belonging to 26206
[2026-02-12 22:44:00] 2026-02-12 21:42:49,241 | INFO     | did not find any defunct processes belonging to 26206
[2026-02-12 22:44:00] 2026-02-12 21:42:49,242 | INFO     | ready for new job
[2026-02-12 22:44:00] 2026-02-12 21:42:49,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 22:44:00] 2026-02-12 21:42:49,244 | INFO     | **************************************
[2026-02-12 22:44:00] 2026-02-12 21:42:49,249 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 22:44:00] 2026-02-12 21:42:49,249 | INFO     | **************************************
[2026-02-12 22:44:00] 2026-02-12 21:42:49,249 | INFO     | 
[2026-02-12 22:44:00] 2026-02-12 21:42:49,250 | INFO     | pilot is running in a VM
[2026-02-12 22:44:00] 2026-02-12 21:42:49,250 | INFO     | architecture information:
[2026-02-12 22:44:00] 2026-02-12 21:42:49,260 | INFO     | executing command: cat /etc/os-release
[2026-02-12 22:44:00] 2026-02-12 21:42:49,547 | INFO     | cat /etc/os-release:
[2026-02-12 22:44:00] NAME="CentOS Linux"
[2026-02-12 22:44:00] VERSION="7 (Core)"
[2026-02-12 22:44:00] ID="centos"
[2026-02-12 22:44:00] ID_LIKE="rhel fedora"
[2026-02-12 22:44:00] VERSION_ID="7"
[2026-02-12 22:44:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 22:44:00] ANSI_COLOR="0;31"
[2026-02-12 22:44:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 22:44:00] HOME_URL="https://www.centos.org/"
[2026-02-12 22:44:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 22:44:00] 
[2026-02-12 22:44:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 22:44:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 22:44:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 22:44:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 22:44:00] 
[2026-02-12 22:44:00] 2026-02-12 21:42:49,548 | INFO     | **************************************
[2026-02-12 22:44:00] 2026-02-12 21:42:50,051 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-12 22:44:00] 2026-02-12 21:42:50,322 | INFO     | sufficient remaining disk space (495180578816 B)
[2026-02-12 22:44:00] 2026-02-12 21:42:50,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 22:44:00] 2026-02-12 21:42:50,323 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 22:44:00] 2026-02-12 21:42:50,323 | INFO     | update_server=False
[2026-02-12 22:44:00] 2026-02-12 21:42:50,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 22:44:00] 2026-02-12 21:42:50,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 22:44:00] 2026-02-12 21:42:50,327 | INFO     | aborting loop
[2026-02-12 22:44:00] 2026-02-12 21:42:50,529 | INFO     | all data control threads have been joined
[2026-02-12 22:44:00] 2026-02-12 21:42:50,664 | INFO     | all job control threads have been joined
[2026-02-12 22:44:00] 2026-02-12 21:42:51,329 | INFO     | [job] retrieve thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,333 | INFO     | [job] job monitor thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,439 | INFO     | all payload control threads have been joined
[2026-02-12 22:44:00] 2026-02-12 21:42:51,517 | INFO     | [payload] validate_post thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 22:44:00] 2026-02-12 21:42:51,535 | INFO     | [data] control thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,670 | INFO     | [job] control thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,712 | INFO     | [data] copytool_in thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 22:44:00] 2026-02-12 21:42:51,783 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 22:44:00] 2026-02-12 21:42:51,950 | INFO     | [payload] failed_post thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:51,980 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:52,053 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:52,157 | INFO     | [job] validate thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:52,445 | INFO     | [payload] control thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:52,524 | INFO     | [job] queue monitor thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:52,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:53,738 | INFO     | [data] copytool_out thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:42:55,894 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 22:44:00] 2026-02-12 21:43:19,965 | INFO     | PID=16873 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-12 22:44:00] 2026-02-12 21:43:19,966 | INFO     | .. there are 2 such processes running
[2026-02-12 22:44:00] 2026-02-12 21:43:19,967 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 22:44:00] 2026-02-12 21:43:19,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 22:44:00] 2026-02-12 21:43:19,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 22:44:00] 2026-02-12 21:43:49,543 | INFO     | [monitor] cgroup control has ended
[2026-02-12 22:44:00] 2026-02-12 21:43:50,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595957937984)>', '<ExcThread(monitor, started 140595536320256)>']
[2026-02-12 22:44:00] 2026-02-12 21:43:51,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 22:44:00] 2026-02-12 21:43:51,151 | INFO     | [monitor] control thread has ended
[2026-02-12 22:44:00] 2026-02-12 21:43:55,571 | INFO     | all workflow threads have been joined
[2026-02-12 22:44:00] 2026-02-12 21:43:55,571 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 22:44:00] 2026-02-12 21:43:55,572 | INFO     | traces error code: 0
[2026-02-12 22:44:00] 2026-02-12 21:43:55,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 22:44:00] 2026-02-12 21:43:55,984 [wrapper] ==== pilot stdout END ====
[2026-02-12 22:44:00] 2026-02-12 21:43:56,083 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 22:44:00] 2026-02-12 21:43:56,173 [wrapper] pilotpid: 16873
[2026-02-12 22:44:00] 2026-02-12 21:43:56,262 [wrapper] Pilot exit status: 0
[2026-02-12 22:44:00] 2026-02-12 21:43:56,731 [wrapper] pandaids: 7008983085
[2026-02-12 22:44:00] 2026-02-12 21:43:57,709 [wrapper] cleanup supervisor_pilot 32407 16874
[2026-02-12 22:44:00] 2026-02-12 21:43:57,801 [wrapper] Test setup, not cleaning
[2026-02-12 22:44:00] 2026-02-12 21:43:57,887 [wrapper] apfmon messages muted
[2026-02-12 22:44:00] 2026-02-12 21:43:57,978 [wrapper] ==== wrapper stdout END ====
[2026-02-12 22:44:00] 2026-02-12 21:43:58,068 [wrapper] ==== wrapper stderr END ====
[2026-02-12 22:44:00]  *** Error codes and diagnostics ***
[2026-02-12 22:44:00]     "exeErrorCode": 0,
[2026-02-12 22:44:00]     "exeErrorDiag": "",
[2026-02-12 22:44:00]     "pilotErrorCode": 0,
[2026-02-12 22:44:00]     "pilotErrorDiag": "",
[2026-02-12 22:44:00]  *** Listing of results directory ***
[2026-02-12 22:44:00] total 671528
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc    584627 Feb 11 23:33 pilot3.tar.gz
[2026-02-12 22:44:00] -rwx------. 1 boinc boinc     36322 Feb 11 23:33 runpilot2-wrapper.sh
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc      5111 Feb 11 23:34 queuedata.json
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc       100 Feb 12 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 22:44:00] -rwxr-xr-x. 1 boinc boinc      7986 Feb 12 18:40 run_atlas
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc       105 Feb 12 18:40 job.xml
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc      6390 Feb 12 18:40 init_data.xml
[2026-02-12 22:44:00] -rw-r--r--. 2 boinc boinc 494833968 Feb 12 18:40 EVNT.48442027._000198.pool.root.1
[2026-02-12 22:44:00] -rw-r--r--. 2 boinc boinc     15845 Feb 12 18:40 start_atlas.sh
[2026-02-12 22:44:00] drwxrwx--x. 2 boinc boinc        68 Feb 12 18:40 shared
[2026-02-12 22:44:00] -rw-r--r--. 2 boinc boinc    597959 Feb 12 18:40 input.tar.gz
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc         0 Feb 12 18:40 boinc_lockfile
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc      2529 Feb 12 18:40 pandaJob.out
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc    999510 Feb 12 18:41 agis_schedconf.cvmfs.json
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc       415 Feb 12 18:41 workernode_map.json
[2026-02-12 22:44:00] drwx------. 5 boinc boinc      4096 Feb 12 18:41 pilot3
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc 183852782 Feb 12 22:41 HITS.48442031._010287.pool.root.1
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc       532 Feb 12 22:41 boinc_task_state.xml
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc      1017 Feb 12 22:42 memory_monitor_summary.json
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc   1512955 Feb 12 22:42 agis_ddmendpoints.agis.ALL.json
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc    489022 Feb 12 22:42 log.48442031._010287.job.log.tgz.1
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc      6321 Feb 12 22:42 heartbeat.json
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc        95 Feb 12 22:43 pilot_heartbeat.json
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc        28 Feb 12 22:43 wrapper_checkpoint.txt
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc      8192 Feb 12 22:43 boinc_mmap_file
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc      4880 Feb 12 22:43 pilotlog.txt
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc   2030662 Feb 12 22:43 log.48442031._010287.job.log.1
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc       357 Feb 12 22:44 output.list
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc       620 Feb 12 22:44 runtime_log
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc   2539520 Feb 12 22:44 result.tar.gz
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc      8816 Feb 12 22:44 runtime_log.err
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc       656 Feb 12 22:44 QM5NDmLxXA9n9Rq4apOajLDm4fhM0noT9bVooX4SDm27jKDmIWutQo.diag
[2026-02-12 22:44:00] -rw-r--r--. 1 boinc boinc     20738 Feb 12 22:44 stderr.txt
[2026-02-12 22:44:00] HITS file was successfully produced:
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc 183852782 Feb 12 22:41 shared/HITS.pool.root.1
[2026-02-12 22:44:00]  *** Contents of shared directory: ***
[2026-02-12 22:44:00] total 665864
[2026-02-12 22:44:00] -rw-r--r--. 2 boinc boinc 494833968 Feb 12 18:40 ATLAS.root_0
[2026-02-12 22:44:00] -rw-r--r--. 2 boinc boinc     15845 Feb 12 18:40 start_atlas.sh
[2026-02-12 22:44:00] -rw-r--r--. 2 boinc boinc    597959 Feb 12 18:40 input.tar.gz
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc 183852782 Feb 12 22:41 HITS.pool.root.1
[2026-02-12 22:44:00] -rw-------. 1 boinc boinc   2539520 Feb 12 22:44 result.tar.gz
22:44:02 (10492): run_atlas exited; CPU time 56105.716436
22:44:02 (10492): called boinc_finish(0)

</stderr_txt>
]]>

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