Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:12 (29516): wrapper (7.7.26015): starting
16:10:12 (29516): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 16:10:12] Arguments: --nthreads 8
[2026-02-12 16:10:12] Threads: 8
[2026-02-12 16:10:12] Checking for CVMFS
[2026-02-12 16:10:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 16:10:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 16:10:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 16:10:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 16:10:17] 2.11.2.0 7073 49039 109492 156159 1 53 24210666 25165824 4834 130560 0 16746624 99.765 19065770 3370 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-12 16:10:17] CVMFS is ok
[2026-02-12 16:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 16:10:17] Checking for apptainer binary...
[2026-02-12 16:10:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 16:10:17] Running /usr/bin/apptainer --version
[2026-02-12 16:10:17] apptainer version 1.3.2-1.el7
[2026-02-12 16:10:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 16:10:32] cg-vwn391.simple-grid.lan
[2026-02-12 16:10:32] apptainer works
[2026-02-12 16:10:32] Set ATHENA_PROC_NUMBER=8
[2026-02-12 16:10:32] Set ATHENA_CORE_NUMBER=8
[2026-02-12 16:10:33] Starting ATLAS job with PandaID=7012954985
[2026-02-12 16:10:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 22:13:28]  *** The last 200 lines of the pilot log: ***
[2026-02-12 22:13:28] 2026-02-12 21:12:16,600 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 22:13:28] 2026-02-12 21:12:16,600 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 22:13:28] 2026-02-12 21:12:16,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 22:13:28] 2026-02-12 21:12:16,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 22:13:28] 2026-02-12 21:12:16,608 | INFO     | fitting pss+swap vs Time
[2026-02-12 22:13:28] 2026-02-12 21:12:16,609 | INFO     | sum of square deviations: 12955770358.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,613 | INFO     | sum of deviations: 4390793786.000065
[2026-02-12 22:13:28] 2026-02-12 21:12:16,613 | INFO     | mean x: 1770920141.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,613 | INFO     | mean y: 2564425.273775216
[2026-02-12 22:13:28] 2026-02-12 21:12:16,613 | INFO     | intersect: -597611784.6884327
[2026-02-12 22:13:28] 2026-02-12 21:12:16,617 | INFO     | chi2: 5.9856716769749605
[2026-02-12 22:13:28] 2026-02-12 21:12:16,618 | INFO     | sum of square deviations: 12403750705.5
[2026-02-12 22:13:28] 2026-02-12 21:12:16,622 | INFO     | sum of deviations: 28317861304.499992
[2026-02-12 22:13:28] 2026-02-12 21:12:16,622 | INFO     | mean x: 1770919988.5
[2026-02-12 22:13:28] 2026-02-12 21:12:16,622 | INFO     | mean y: 2570959.4941520467
[2026-02-12 22:13:28] 2026-02-12 21:12:16,622 | INFO     | intersect: -4040453429.368572
[2026-02-12 22:13:28] 2026-02-12 21:12:16,623 | INFO     | chi2: 5.251723215743006
[2026-02-12 22:13:28] 2026-02-12 21:12:16,623 | INFO     | current chi2=5.251723215743006 (change=12.261756087545344 %)
[2026-02-12 22:13:28] 2026-02-12 21:12:16,623 | INFO     | right removable region: 341
[2026-02-12 22:13:28] 2026-02-12 21:12:16,624 | INFO     | sum of square deviations: 12403750705.5
[2026-02-12 22:13:28] 2026-02-12 21:12:16,628 | INFO     | sum of deviations: -115449520246.00003
[2026-02-12 22:13:28] 2026-02-12 21:12:16,628 | INFO     | mean x: 1770920293.5
[2026-02-12 22:13:28] 2026-02-12 21:12:16,628 | INFO     | mean y: 2597503.9064327483
[2026-02-12 22:13:28] 2026-02-12 21:12:16,628 | INFO     | intersect: 16485668079.310991
[2026-02-12 22:13:28] 2026-02-12 21:12:16,629 | INFO     | chi2: 1.75825970463649
[2026-02-12 22:13:28] 2026-02-12 21:12:16,629 | INFO     | current chi2=1.75825970463649 (change=70.625523758679 %)
[2026-02-12 22:13:28] 2026-02-12 21:12:16,630 | INFO     | sum of square deviations: 11867638328.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,634 | INFO     | sum of deviations: -151968097324.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,634 | INFO     | mean x: 1770920446.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,634 | INFO     | mean y: 2607834.587537092
[2026-02-12 22:13:28] 2026-02-12 21:12:16,634 | INFO     | intersect: 22679690102.576035
[2026-02-12 22:13:28] 2026-02-12 21:12:16,635 | INFO     | chi2: 1.1260967541791207
[2026-02-12 22:13:28] 2026-02-12 21:12:16,635 | INFO     | current chi2=1.1260967541791207 (change=35.95390082536557 %)
[2026-02-12 22:13:28] 2026-02-12 21:12:16,636 | INFO     | sum of square deviations: 11347200663.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,640 | INFO     | sum of deviations: -152511270878.5
[2026-02-12 22:13:28] 2026-02-12 21:12:16,640 | INFO     | mean x: 1770920598.5
[2026-02-12 22:13:28] 2026-02-12 21:12:16,640 | INFO     | mean y: 2607976.4186746986
[2026-02-12 22:13:28] 2026-02-12 21:12:16,640 | INFO     | intersect: 23804544605.84839
[2026-02-12 22:13:28] 2026-02-12 21:12:16,641 | INFO     | chi2: 1.099999352111106
[2026-02-12 22:13:28] 2026-02-12 21:12:16,641 | INFO     | current chi2=1.099999352111106 (change=2.317509749598617 %)
[2026-02-12 22:13:28] 2026-02-12 21:12:16,641 | INFO     | left removable region: 30
[2026-02-12 22:13:28] 2026-02-12 21:12:16,642 | INFO     | sum of square deviations: 9327281860.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,645 | INFO     | sum of deviations: -99413076160.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,645 | INFO     | mean x: 1770920873.0
[2026-02-12 22:13:28] 2026-02-12 21:12:16,646 | INFO     | mean y: 2606686.909967846
[2026-02-12 22:13:28] 2026-02-12 21:12:16,646 | INFO     | intersect: 18877633116.194126
[2026-02-12 22:13:28] 2026-02-12 21:12:16,646 | INFO     | chi2: 0.30326070241201564
[2026-02-12 22:13:28] 2026-02-12 21:12:16,646 | INFO     | current memory leak: -10.66 B/s (using 311 data points, chi2=0.30)
[2026-02-12 22:13:28] 2026-02-12 21:12:16,647 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-02-12 22:13:28] 2026-02-12 21:12:16,647 | INFO     | ..............................
[2026-02-12 22:13:28] 2026-02-12 21:12:16,647 | INFO     | . Timing measurements:
[2026-02-12 22:13:28] 2026-02-12 21:12:16,647 | INFO     | . get job = 0 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,647 | INFO     | . initial setup = 104 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,648 | INFO     | . payload setup = 139 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,648 | INFO     | . stage-in = 0 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,648 | INFO     | . payload execution = 21240 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,648 | INFO     | . stage-out = 3 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,648 | INFO     | . log creation = 1 s
[2026-02-12 22:13:28] 2026-02-12 21:12:16,648 | INFO     | ..............................
[2026-02-12 22:13:28] 2026-02-12 21:12:17,173 | INFO     | 
[2026-02-12 22:13:28] 2026-02-12 21:12:17,173 | INFO     | job summary report
[2026-02-12 22:13:28] 2026-02-12 21:12:17,173 | INFO     | --------------------------------------------------
[2026-02-12 22:13:28] 2026-02-12 21:12:17,173 | INFO     | PanDA job id: 7012954985
[2026-02-12 22:13:28] 2026-02-12 21:12:17,173 | INFO     | task id: 48431096
[2026-02-12 22:13:28] 2026-02-12 21:12:17,173 | INFO     | errors: (none)
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | pilot state: finished 
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | transexitcode: 0
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | exeerrorcode: 0
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | exeerrordiag: 
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | exitcode: 0
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | exitmsg: OK
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | cpuconsumptiontime: 83323 s
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | nevents: 400
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | neventsw: 0
[2026-02-12 22:13:28] 2026-02-12 21:12:17,174 | INFO     | pid: 5776
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | pgrp: 5776
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | corecount: 8
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | event service: False
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | sizes: {0: 2281123, 1: 2281809, 2: 2282270, 21384: 2315938, 21390: 2324938, 21391: 2324994, 21393: 2325316}
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | --------------------------------------------------
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | 
[2026-02-12 22:13:28] 2026-02-12 21:12:17,175 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2026-02-12 22:13:28] 2026-02-12 21:12:17,463 | INFO     | time since job start (21396s) is within the limit (349056.0s)
[2026-02-12 22:13:28] 2026-02-12 21:12:17,517 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,519 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 22:13:28] 2026-02-12 21:12:17,520 | INFO     | job 7012954985 has completed (purged errors)
[2026-02-12 22:13:28] 2026-02-12 21:12:17,520 | INFO     | overall cleanup function is called
[2026-02-12 22:13:28] 2026-02-12 21:12:18,539 | INFO     | --- collectZombieJob: --- 10, [5776]
[2026-02-12 22:13:28] 2026-02-12 21:12:18,539 | INFO     | zombie collector waiting for pid 5776
[2026-02-12 22:13:28] 2026-02-12 21:12:18,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 22:13:28] 2026-02-12 21:12:18,539 | INFO     | collected zombie processes
[2026-02-12 22:13:28] 2026-02-12 21:12:18,539 | INFO     | will attempt to kill all subprocesses of pid=5776
[2026-02-12 22:13:28] 2026-02-12 21:12:18,681 | INFO     | PID=1249 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-12 22:13:28] 2026-02-12 21:12:18,681 | INFO     | .. there are 9 such processes running
[2026-02-12 22:13:28] 2026-02-12 21:12:18,731 | INFO     | process IDs to be killed: [5776] (in reverse order)
[2026-02-12 22:13:28] 2026-02-12 21:12:19,381 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 22:13:28] 2026-02-12 21:12:19,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 22:13:28] 2026-02-12 21:12:19,385 | INFO     | did not find any defunct processes belonging to 5776
[2026-02-12 22:13:28] 2026-02-12 21:12:19,391 | INFO     | did not find any defunct processes belonging to 5776
[2026-02-12 22:13:28] 2026-02-12 21:12:19,391 | INFO     | ready for new job
[2026-02-12 22:13:28] 2026-02-12 21:12:19,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 22:13:28] 2026-02-12 21:12:19,394 | INFO     | **************************************
[2026-02-12 22:13:28] 2026-02-12 21:12:19,394 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 22:13:28] 2026-02-12 21:12:19,394 | INFO     | **************************************
[2026-02-12 22:13:28] 2026-02-12 21:12:19,394 | INFO     | 
[2026-02-12 22:13:28] 2026-02-12 21:12:19,395 | INFO     | pilot is running in a VM
[2026-02-12 22:13:28] 2026-02-12 21:12:19,395 | INFO     | architecture information:
[2026-02-12 22:13:28] 2026-02-12 21:12:19,403 | INFO     | executing command: cat /etc/os-release
[2026-02-12 22:13:28] 2026-02-12 21:12:19,539 | INFO     | cat /etc/os-release:
[2026-02-12 22:13:28] NAME="CentOS Linux"
[2026-02-12 22:13:28] VERSION="7 (Core)"
[2026-02-12 22:13:28] ID="centos"
[2026-02-12 22:13:28] ID_LIKE="rhel fedora"
[2026-02-12 22:13:28] VERSION_ID="7"
[2026-02-12 22:13:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 22:13:28] ANSI_COLOR="0;31"
[2026-02-12 22:13:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 22:13:28] HOME_URL="https://www.centos.org/"
[2026-02-12 22:13:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 22:13:28] 
[2026-02-12 22:13:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 22:13:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 22:13:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 22:13:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 22:13:28] 
[2026-02-12 22:13:28] 2026-02-12 21:12:19,540 | INFO     | **************************************
[2026-02-12 22:13:28] 2026-02-12 21:12:20,043 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2026-02-12 22:13:28] 2026-02-12 21:12:20,474 | INFO     | sufficient remaining disk space (494158217216 B)
[2026-02-12 22:13:28] 2026-02-12 21:12:20,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 22:13:28] 2026-02-12 21:12:20,474 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 22:13:28] 2026-02-12 21:12:20,474 | INFO     | update_server=False
[2026-02-12 22:13:28] 2026-02-12 21:12:20,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 22:13:28] 2026-02-12 21:12:20,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 22:13:28] 2026-02-12 21:12:20,706 | INFO     | all data control threads have been joined
[2026-02-12 22:13:28] 2026-02-12 21:12:20,836 | INFO     | all payload control threads have been joined
[2026-02-12 22:13:28] 2026-02-12 21:12:20,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 22:13:28] 2026-02-12 21:12:20,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-12 22:13:28] 2026-02-12 21:12:20,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-12 22:13:28] 2026-02-12 21:12:20,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 22:13:28] 2026-02-12 21:12:20,926 | INFO     | will abort loop
[2026-02-12 22:13:28] 2026-02-12 21:12:21,286 | INFO     | all job control threads have been joined
[2026-02-12 22:13:28] 2026-02-12 21:12:21,481 | INFO     | [job] retrieve thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,496 | INFO     | [payload] validate_post thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,712 | INFO     | [data] control thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,784 | INFO     | [payload] failed_post thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 22:13:28] 2026-02-12 21:12:21,842 | INFO     | [payload] control thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,873 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,929 | INFO     | [data] copytool_in thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,930 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:21,932 | INFO     | [job] job monitor thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:22,068 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:22,103 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:22,292 | INFO     | [job] control thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:22,817 | INFO     | [job] queue monitor thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:22,910 | INFO     | [data] copytool_out thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:22,920 | INFO     | [job] validate thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:24,486 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 22:13:28] 2026-02-12 21:12:50,834 | INFO     | PID=1249 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-12 22:13:28] 2026-02-12 21:12:50,834 | INFO     | .. there are 9 such processes running
[2026-02-12 22:13:28] 2026-02-12 21:12:50,835 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 22:13:28] 2026-02-12 21:12:50,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 22:13:28] 2026-02-12 21:12:50,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 22:13:28] 2026-02-12 21:13:17,505 | INFO     | [monitor] cgroup control has ended
[2026-02-12 22:13:28] 2026-02-12 21:13:19,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649108268864)>', '<ExcThread(monitor, started 140648652969728)>']
[2026-02-12 22:13:28] 2026-02-12 21:13:20,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 22:13:28] 2026-02-12 21:13:20,008 | INFO     | [monitor] control thread has ended
[2026-02-12 22:13:28] 2026-02-12 21:13:24,235 | INFO     | all workflow threads have been joined
[2026-02-12 22:13:28] 2026-02-12 21:13:24,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 22:13:28] 2026-02-12 21:13:24,235 | INFO     | traces error code: 0
[2026-02-12 22:13:28] 2026-02-12 21:13:24,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 22:13:28] 2026-02-12 21:13:24,489 [wrapper] ==== pilot stdout END ====
[2026-02-12 22:13:28] 2026-02-12 21:13:24,502 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 22:13:28] 2026-02-12 21:13:24,584 [wrapper] pilotpid: 1249
[2026-02-12 22:13:28] 2026-02-12 21:13:24,673 [wrapper] Pilot exit status: 0
[2026-02-12 22:13:28] 2026-02-12 21:13:25,122 [wrapper] pandaids: 7012954985
[2026-02-12 22:13:28] 2026-02-12 21:13:26,018 [wrapper] cleanup supervisor_pilot 15501 1250
[2026-02-12 22:13:28] 2026-02-12 21:13:26,076 [wrapper] Test setup, not cleaning
[2026-02-12 22:13:28] 2026-02-12 21:13:26,195 [wrapper] apfmon messages muted
[2026-02-12 22:13:28] 2026-02-12 21:13:26,292 [wrapper] ==== wrapper stdout END ====
[2026-02-12 22:13:28] 2026-02-12 21:13:26,373 [wrapper] ==== wrapper stderr END ====
[2026-02-12 22:13:28]  *** Error codes and diagnostics ***
[2026-02-12 22:13:28]     "exeErrorCode": 0,
[2026-02-12 22:13:28]     "exeErrorDiag": "",
[2026-02-12 22:13:28]     "pilotErrorCode": 0,
[2026-02-12 22:13:28]     "pilotErrorDiag": "",
[2026-02-12 22:13:28]  *** Listing of results directory ***
[2026-02-12 22:13:28] total 953052
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc    584627 Feb 12 01:45 pilot3.tar.gz
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc      5111 Feb 12 01:45 queuedata.json
[2026-02-12 22:13:28] -rwx------. 1 boinc boinc     36322 Feb 12 01:47 runpilot2-wrapper.sh
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc       100 Feb 12 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 22:13:28] -rwxr-xr-x. 1 boinc boinc      7986 Feb 12 16:10 run_atlas
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc       105 Feb 12 16:10 job.xml
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc      6392 Feb 12 16:10 init_data.xml
[2026-02-12 22:13:28] -rw-r--r--. 2 boinc boinc 681173148 Feb 12 16:10 EVNT.48431094._000149.pool.root.1
[2026-02-12 22:13:28] -rw-r--r--. 2 boinc boinc     15845 Feb 12 16:10 start_atlas.sh
[2026-02-12 22:13:28] drwxrwx--x. 2 boinc boinc        68 Feb 12 16:10 shared
[2026-02-12 22:13:28] -rw-r--r--. 2 boinc boinc    597965 Feb 12 16:10 input.tar.gz
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc         0 Feb 12 16:10 boinc_lockfile
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc      2555 Feb 12 16:10 pandaJob.out
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc       415 Feb 12 16:15 workernode_map.json
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc    999474 Feb 12 16:15 agis_schedconf.cvmfs.json
[2026-02-12 22:13:28] drwx------. 5 boinc boinc      4096 Feb 12 16:15 pilot3
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc 283761617 Feb 12 22:10 HITS.48431096._034555.pool.root.1
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc       532 Feb 12 22:11 boinc_task_state.xml
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc      1012 Feb 12 22:12 memory_monitor_summary.json
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc   1512955 Feb 12 22:12 agis_ddmendpoints.agis.ALL.json
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc    571542 Feb 12 22:12 log.48431096._034555.job.log.tgz.1
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc      6324 Feb 12 22:12 heartbeat.json
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc        95 Feb 12 22:12 pilot_heartbeat.json
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc      8192 Feb 12 22:12 boinc_mmap_file
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc        28 Feb 12 22:12 wrapper_checkpoint.txt
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc      5066 Feb 12 22:13 pilotlog.txt
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc   2961634 Feb 12 22:13 log.48431096._034555.job.log.1
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc       357 Feb 12 22:13 output.list
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc       620 Feb 12 22:13 runtime_log
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc   3553280 Feb 12 22:13 result.tar.gz
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc       656 Feb 12 22:13 vE0MDmU2ZA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMGlKDmFte3Fn.diag
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc      8832 Feb 12 22:13 runtime_log.err
[2026-02-12 22:13:28] -rw-r--r--. 1 boinc boinc     20777 Feb 12 22:13 stderr.txt
[2026-02-12 22:13:28] HITS file was successfully produced:
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc 283761617 Feb 12 22:10 shared/HITS.pool.root.1
[2026-02-12 22:13:28]  *** Contents of shared directory: ***
[2026-02-12 22:13:28] total 946396
[2026-02-12 22:13:28] -rw-r--r--. 2 boinc boinc 681173148 Feb 12 16:10 ATLAS.root_0
[2026-02-12 22:13:28] -rw-r--r--. 2 boinc boinc     15845 Feb 12 16:10 start_atlas.sh
[2026-02-12 22:13:28] -rw-r--r--. 2 boinc boinc    597965 Feb 12 16:10 input.tar.gz
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc 283761617 Feb 12 22:10 HITS.pool.root.1
[2026-02-12 22:13:28] -rw-------. 1 boinc boinc   3553280 Feb 12 22:13 result.tar.gz
22:13:30 (29516): run_atlas exited; CPU time 83654.749736
22:13:30 (29516): called boinc_finish(0)

</stderr_txt>
]]>

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