Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:03 (991629): wrapper (7.7.26015): starting
19:36:03 (991629): wrapper: running run_atlas (--nthreads 3)
[2026-02-12 19:36:03] Arguments: --nthreads 3
[2026-02-12 19:36:03] Threads: 3
[2026-02-12 19:36:03] Checking for CVMFS
[2026-02-12 19:36:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 19:36:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 19:36:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 19:36:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 19:36:04] 2.9.2.0 959472 203 54812 156167 0 50 23841843 36864001 0 130560 0 75280 99.985 11840 7877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-12 19:36:04] CVMFS is ok
[2026-02-12 19:36:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 19:36:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 19:36:04] Further information can be found at the LHC@home message board.
[2026-02-12 19:36:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 19:36:04] Checking for apptainer binary...
[2026-02-12 19:36:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 19:36:04] Running /usr/bin/apptainer --version
[2026-02-12 19:36:04] apptainer version 1.4.1-1.1
[2026-02-12 19:36:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 19:36:04] legendA269a
[2026-02-12 19:36:04] apptainer works
[2026-02-12 19:36:04] Set ATHENA_PROC_NUMBER=3
[2026-02-12 19:36:04] Set ATHENA_CORE_NUMBER=3
[2026-02-12 19:36:04] Starting ATLAS job with PandaID=7012635601
[2026-02-12 19:36:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 21:37:28]  *** The last 200 lines of the pilot log: ***
[2026-02-12 21:37:28] 2026-02-12 20:36:26,733 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 21:37:28] 2026-02-12 20:36:26,984 | INFO     | job 7012635601 has state=finished
[2026-02-12 21:37:28] 2026-02-12 20:36:26,985 | INFO     | preparing for final server update for job 7012635601 in state='finished'
[2026-02-12 21:37:28] 2026-02-12 20:36:26,985 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7012635601/jobReport.json
[2026-02-12 21:37:28] 2026-02-12 20:36:26,986 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-12 21:37:28] 2026-02-12 20:36:26,987 | INFO     | this job has now completed (state=finished)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,987 | INFO     | log transfer has been attempted: DONE
[2026-02-12 21:37:28] 2026-02-12 20:36:26,987 | INFO     | job 7012635601 has finished - writing final server update
[2026-02-12 21:37:28] 2026-02-12 20:36:26,987 | INFO     | total number of processed events: 400 (read)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,988 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7012635601/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,988 | INFO     | extracted standard info from prmon json
[2026-02-12 21:37:28] 2026-02-12 20:36:26,988 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 21:37:28] 2026-02-12 20:36:26,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 21:37:28] 2026-02-12 20:36:26,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 21:37:28] 2026-02-12 20:36:26,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 21:37:28] 2026-02-12 20:36:26,989 | INFO     | fitting pss+swap vs Time
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | sum of square deviations: 509440249.5
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | sum of deviations: -8154695116.500002
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | mean x: 1770924960.5
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | mean y: 2419317.4322033897
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | intersect: 28349910787.238636
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | chi2: 1.7664253833799297
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | sum of square deviations: 447383272.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | sum of deviations: -7562299320.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | mean x: 1770924808.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | mean y: 2420773.9911504425
[2026-02-12 21:37:28] 2026-02-12 20:36:26,990 | INFO     | intersect: 29937074815.56991
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | chi2: 1.763252140433431
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | current chi2=1.763252140433431 (change=0.17964205996785515 %)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | right removable region: 112
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | sum of square deviations: 447383272.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | sum of deviations: -23844142380.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | mean x: 1770925113.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | mean y: 2456960.1415929203
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | intersect: 94387279061.15565
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | chi2: 0.2488656117414589
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | current chi2=0.2488656117414589 (change=85.91134309532666 %)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,991 | INFO     | sum of square deviations: 390582207.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | sum of deviations: -18863908582.999996
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | mean x: 1770925265.5
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | mean y: 2443571.814814815
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | intersect: 85532638539.7515
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | chi2: 0.2378269557634318
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | current chi2=0.2378269557634318 (change=4.435589112044509 %)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | left removable region: 20
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | sum of square deviations: 241429643.0
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | sum of deviations: -7571244573.499999
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | mean x: 1770925387.5
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | mean y: 2411400.4891304346
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | intersect: 55538712012.02074
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | chi2: 0.15975012448445372
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | current memory leak: -31.36 B/s (using 92 data points, chi2=0.16)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | could have reported an average CPU frequency of 3599 MHz (8 samples)
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | ..............................
[2026-02-12 21:37:28] 2026-02-12 20:36:26,992 | INFO     | . Timing measurements:
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . get job = 0 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . initial setup = 3 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . payload setup = 2 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . stage-in = 0 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . payload execution = 7191 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . stage-out = 0 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | . log creation = 0 s
[2026-02-12 21:37:28] 2026-02-12 20:36:26,993 | INFO     | ..............................
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | 
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | job summary report
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | --------------------------------------------------
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | PanDA job id: 7012635601
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | task id: 48431096
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | errors: (none)
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | pilot state: finished 
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | transexitcode: 0
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | exeerrorcode: 0
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | exeerrordiag: 
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | exitcode: 0
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | exitmsg: OK
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | cpuconsumptiontime: 20812 s
[2026-02-12 21:37:28] 2026-02-12 20:36:27,022 | INFO     | nevents: 400
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | neventsw: 0
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | pid: 1000104
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | pgrp: 1000104
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | corecount: 3
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | event service: False
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | sizes: {0: 2282216, 11: 2282216, 7197: 2309714, 7198: 2318773, 7200: 2318967}
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | --------------------------------------------------
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | 
[2026-02-12 21:37:28] 2026-02-12 20:36:27,023 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | job 7012635601 has completed (purged errors)
[2026-02-12 21:37:28] 2026-02-12 20:36:27,034 | INFO     | overall cleanup function is called
[2026-02-12 21:37:28] 2026-02-12 20:36:27,535 | INFO     | PID=995685 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-12 21:37:28] 2026-02-12 20:36:28,041 | INFO     | --- collectZombieJob: --- 10, [1000104]
[2026-02-12 21:37:28] 2026-02-12 20:36:28,041 | INFO     | zombie collector waiting for pid 1000104
[2026-02-12 21:37:28] 2026-02-12 20:36:28,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 21:37:28] 2026-02-12 20:36:28,041 | INFO     | collected zombie processes
[2026-02-12 21:37:28] 2026-02-12 20:36:28,041 | INFO     | will attempt to kill all subprocesses of pid=1000104
[2026-02-12 21:37:28] 2026-02-12 20:36:28,095 | INFO     | process IDs to be killed: [1000104] (in reverse order)
[2026-02-12 21:37:28] 2026-02-12 20:36:28,123 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 21:37:28] 2026-02-12 20:36:28,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 21:37:28] 2026-02-12 20:36:28,125 | INFO     | did not find any defunct processes belonging to 1000104
[2026-02-12 21:37:28] 2026-02-12 20:36:28,126 | INFO     | did not find any defunct processes belonging to 1000104
[2026-02-12 21:37:28] 2026-02-12 20:36:28,126 | INFO     | ready for new job
[2026-02-12 21:37:28] 2026-02-12 20:36:28,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 21:37:28] 2026-02-12 20:36:28,127 | INFO     | **************************************
[2026-02-12 21:37:28] 2026-02-12 20:36:28,127 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 21:37:28] 2026-02-12 20:36:28,127 | INFO     | **************************************
[2026-02-12 21:37:28] 2026-02-12 20:36:28,127 | INFO     | 
[2026-02-12 21:37:28] 2026-02-12 20:36:28,128 | INFO     | architecture information:
[2026-02-12 21:37:28] 2026-02-12 20:36:28,128 | INFO     | executing command: cat /etc/os-release
[2026-02-12 21:37:28] 2026-02-12 20:36:28,136 | INFO     | cat /etc/os-release:
[2026-02-12 21:37:28] NAME="CentOS Linux"
[2026-02-12 21:37:28] VERSION="7 (Core)"
[2026-02-12 21:37:28] ID="centos"
[2026-02-12 21:37:28] ID_LIKE="rhel fedora"
[2026-02-12 21:37:28] VERSION_ID="7"
[2026-02-12 21:37:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 21:37:28] ANSI_COLOR="0;31"
[2026-02-12 21:37:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 21:37:28] HOME_URL="https://www.centos.org/"
[2026-02-12 21:37:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 21:37:28] 
[2026-02-12 21:37:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 21:37:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 21:37:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 21:37:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 21:37:28] 
[2026-02-12 21:37:28] 2026-02-12 20:36:28,136 | INFO     | **************************************
[2026-02-12 21:37:28] 2026-02-12 20:36:28,640 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-12 21:37:28] 2026-02-12 20:36:28,652 | INFO     | sufficient remaining disk space (376673665024 B)
[2026-02-12 21:37:28] 2026-02-12 20:36:28,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 21:37:28] 2026-02-12 20:36:28,652 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 21:37:28] 2026-02-12 20:36:28,652 | INFO     | update_server=False
[2026-02-12 21:37:28] 2026-02-12 20:36:28,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 21:37:28] 2026-02-12 20:36:28,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 21:37:28] 2026-02-12 20:36:28,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 21:37:28] 2026-02-12 20:36:28,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 21:37:28] 2026-02-12 20:36:29,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 21:37:28] 2026-02-12 20:36:29,023 | INFO     | aborting loop
[2026-02-12 21:37:28] 2026-02-12 20:36:29,191 | INFO     | all job control threads have been joined
[2026-02-12 21:37:28] 2026-02-12 20:36:29,580 | INFO     | all data control threads have been joined
[2026-02-12 21:37:28] 2026-02-12 20:36:29,658 | INFO     | [job] retrieve thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:29,658 | INFO     | [job] queue monitor thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:29,840 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:29,905 | INFO     | [payload] failed_post thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:29,985 | INFO     | all payload control threads have been joined
[2026-02-12 21:37:28] 2026-02-12 20:36:30,028 | INFO     | [job] job monitor thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,197 | INFO     | [job] control thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,433 | INFO     | [job] validate thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,472 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,474 | INFO     | [payload] validate_post thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,586 | INFO     | [data] control thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,651 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,653 | INFO     | [data] copytool_out thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,723 | INFO     | [data] copytool_in thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:30,991 | INFO     | [payload] control thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:32,659 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:39,156 | INFO     | job.realtimelogging is not enabled
[2026-02-12 21:37:28] 2026-02-12 20:36:40,162 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 21:37:28] 2026-02-12 20:36:59,663 | INFO     | PID=995685 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-12 21:37:28] 2026-02-12 20:36:59,663 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 21:37:28] 2026-02-12 20:36:59,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 21:37:28] 2026-02-12 20:36:59,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 21:37:28] 2026-02-12 20:37:22,986 | INFO     | [monitor] cgroup control has ended
[2026-02-12 21:37:28] 2026-02-12 20:37:23,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168148059968)>', '<ExcThread(monitor, started 140167524378368)>']
[2026-02-12 21:37:28] 2026-02-12 20:37:23,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 21:37:28] 2026-02-12 20:37:23,781 | INFO     | [monitor] control thread has ended
[2026-02-12 21:37:28] 2026-02-12 20:37:28,298 | INFO     | all workflow threads have been joined
[2026-02-12 21:37:28] 2026-02-12 20:37:28,299 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 21:37:28] 2026-02-12 20:37:28,299 | INFO     | traces error code: 0
[2026-02-12 21:37:28] 2026-02-12 20:37:28,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 21:37:28] 2026-02-12 20:37:28,348 [wrapper] ==== pilot stdout END ====
[2026-02-12 21:37:28] 2026-02-12 20:37:28,351 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 21:37:28] 2026-02-12 20:37:28,353 [wrapper] pilotpid: 995685
[2026-02-12 21:37:28] 2026-02-12 20:37:28,355 [wrapper] Pilot exit status: 0
[2026-02-12 21:37:28] 2026-02-12 20:37:28,363 [wrapper] pandaids: 7012635601
[2026-02-12 21:37:28] 2026-02-12 20:37:28,382 [wrapper] cleanup supervisor_pilot 1008562 995686
[2026-02-12 21:37:28] 2026-02-12 20:37:28,384 [wrapper] Test setup, not cleaning
[2026-02-12 21:37:28] 2026-02-12 20:37:28,387 [wrapper] apfmon messages muted
[2026-02-12 21:37:28] 2026-02-12 20:37:28,389 [wrapper] ==== wrapper stdout END ====
[2026-02-12 21:37:28] 2026-02-12 20:37:28,391 [wrapper] ==== wrapper stderr END ====
[2026-02-12 21:37:28]  *** Error codes and diagnostics ***
[2026-02-12 21:37:28]     "exeErrorCode": 0,
[2026-02-12 21:37:28]     "exeErrorDiag": "",
[2026-02-12 21:37:28]     "pilotErrorCode": 0,
[2026-02-12 21:37:28]     "pilotErrorDiag": "",
[2026-02-12 21:37:28]  *** Listing of results directory ***
[2026-02-12 21:37:28] total 945804
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc    584627 Feb 11 18:45 pilot3.tar.gz
[2026-02-12 21:37:28] -rwx------ 1 boinc boinc     36322 Feb 11 18:46 runpilot2-wrapper.sh
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc      5111 Feb 11 18:48 queuedata.json
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc       100 Feb 12 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 21:37:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 19:36 run_atlas
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc       105 Feb 12 19:36 job.xml
[2026-02-12 21:37:28] -rw-r--r-- 2 boinc boinc 684984510 Feb 12 19:36 EVNT.48431094._000062.pool.root.1
[2026-02-12 21:37:28] -rw-r--r-- 2 boinc boinc    597962 Feb 12 19:36 input.tar.gz
[2026-02-12 21:37:28] drwxrwx--x 2 boinc boinc      4096 Feb 12 19:36 shared
[2026-02-12 21:37:28] -rw-r--r-- 2 boinc boinc     15845 Feb 12 19:36 start_atlas.sh
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc         0 Feb 12 19:36 boinc_setup_complete
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc      6449 Feb 12 19:36 init_data.xml
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc         0 Feb 12 19:36 boinc_lockfile
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc      2555 Feb 12 19:36 pandaJob.out
[2026-02-12 21:37:28] -rw------- 1 boinc boinc   1000254 Feb 12 19:36 agis_schedconf.cvmfs.json
[2026-02-12 21:37:28] -rw------- 1 boinc boinc   1512955 Feb 12 19:36 agis_ddmendpoints.agis.ALL.json
[2026-02-12 21:37:28] -rw------- 1 boinc boinc       428 Feb 12 19:36 workernode_map.json
[2026-02-12 21:37:28] drwx------ 5 boinc boinc      4096 Feb 12 19:36 pilot3
[2026-02-12 21:37:28] -rw------- 1 boinc boinc 276937467 Feb 12 21:36 HITS.48431096._033382.pool.root.1
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc       530 Feb 12 21:36 boinc_task_state.xml
[2026-02-12 21:37:28] -rw------- 1 boinc boinc      1023 Feb 12 21:36 memory_monitor_summary.json
[2026-02-12 21:37:28] -rw------- 1 boinc boinc    283322 Feb 12 21:36 log.48431096._033382.job.log.tgz.1
[2026-02-12 21:37:28] -rw------- 1 boinc boinc      6319 Feb 12 21:36 heartbeat.json
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc        27 Feb 12 21:36 wrapper_checkpoint.txt
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc      8192 Feb 12 21:36 boinc_mmap_file
[2026-02-12 21:37:28] -rw------- 1 boinc boinc        95 Feb 12 21:36 pilot_heartbeat.json
[2026-02-12 21:37:28] -rw------- 1 boinc boinc      4819 Feb 12 21:37 pilotlog.txt
[2026-02-12 21:37:28] -rw------- 1 boinc boinc   1037741 Feb 12 21:37 log.48431096._033382.job.log.1
[2026-02-12 21:37:28] -rw------- 1 boinc boinc       357 Feb 12 21:37 output.list
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc       620 Feb 12 21:37 runtime_log
[2026-02-12 21:37:28] -rw------- 1 boinc boinc   1341440 Feb 12 21:37 result.tar.gz
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc      8921 Feb 12 21:37 runtime_log.err
[2026-02-12 21:37:28] -rw------- 1 boinc boinc       662 Feb 12 21:37 fHkKDmUTTA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmurjKDmd37XSo.diag
[2026-02-12 21:37:28] -rw-r--r-- 1 boinc boinc     21321 Feb 12 21:37 stderr.txt
[2026-02-12 21:37:28] HITS file was successfully produced:
[2026-02-12 21:37:28] -rw------- 1 boinc boinc 276937467 Feb 12 21:36 shared/HITS.pool.root.1
[2026-02-12 21:37:28]  *** Contents of shared directory: ***
[2026-02-12 21:37:28] total 941300
[2026-02-12 21:37:28] -rw-r--r-- 2 boinc boinc 684984510 Feb 12 19:36 ATLAS.root_0
[2026-02-12 21:37:28] -rw-r--r-- 2 boinc boinc    597962 Feb 12 19:36 input.tar.gz
[2026-02-12 21:37:28] -rw-r--r-- 2 boinc boinc     15845 Feb 12 19:36 start_atlas.sh
[2026-02-12 21:37:28] -rw------- 1 boinc boinc 276937467 Feb 12 21:36 HITS.pool.root.1
[2026-02-12 21:37:28] -rw------- 1 boinc boinc   1341440 Feb 12 21:37 result.tar.gz
21:37:30 (991629): run_atlas exited; CPU time 20858.733005
21:37:30 (991629): called boinc_finish(0)

</stderr_txt>
]]>

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