Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:50:51 (1233618): wrapper (7.7.26015): starting
14:50:51 (1233618): wrapper: running run_atlas (--nthreads 4)
[2026-02-12 14:50:51] Arguments: --nthreads 4
[2026-02-12 14:50:51] Threads: 4
[2026-02-12 14:50:51] Checking for CVMFS
[2026-02-12 14:50:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 14:50:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 14:50:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 14:50:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 14:50:51] 2.9.2.0 3863091 8953 100040 156157 1 50 26032814 36864001 0 130560 0 4275335 99.986 303930 5631 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-12 14:50:51] CVMFS is ok
[2026-02-12 14:50:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 14:50:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 14:50:51] Further information can be found at the LHC@home message board.
[2026-02-12 14:50:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 14:50:51] Checking for apptainer binary...
[2026-02-12 14:50:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 14:50:51] Running /usr/bin/apptainer --version
[2026-02-12 14:50:51] apptainer version 1.4.1-1.1
[2026-02-12 14:50:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 14:50:52] thA325
[2026-02-12 14:50:52] apptainer works
[2026-02-12 14:50:52] Set ATHENA_PROC_NUMBER=4
[2026-02-12 14:50:52] Set ATHENA_CORE_NUMBER=4
[2026-02-12 14:50:52] Starting ATLAS job with PandaID=7011511734
[2026-02-12 14:50:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 16:36:23]  *** The last 200 lines of the pilot log: ***
[2026-02-12 16:36:23] 2026-02-12 15:35:50,943 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 16:36:23] 2026-02-12 15:35:50,943 | INFO     | job 7011511734 has completed (purged errors)
[2026-02-12 16:36:23] 2026-02-12 15:35:50,943 | INFO     | overall cleanup function is called
[2026-02-12 16:36:23] 2026-02-12 15:35:51,950 | INFO     | --- collectZombieJob: --- 10, [1242259]
[2026-02-12 16:36:23] 2026-02-12 15:35:51,950 | INFO     | zombie collector waiting for pid 1242259
[2026-02-12 16:36:23] 2026-02-12 15:35:51,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 16:36:23] 2026-02-12 15:35:51,950 | INFO     | collected zombie processes
[2026-02-12 16:36:23] 2026-02-12 15:35:51,950 | INFO     | will attempt to kill all subprocesses of pid=1242259
[2026-02-12 16:36:23] 2026-02-12 15:35:52,001 | INFO     | process IDs to be killed: [1242259] (in reverse order)
[2026-02-12 16:36:23] 2026-02-12 15:35:52,034 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 16:36:23] 2026-02-12 15:35:52,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 16:36:23] 2026-02-12 15:35:52,036 | INFO     | did not find any defunct processes belonging to 1242259
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | did not find any defunct processes belonging to 1242259
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | ready for new job
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | **************************************
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | **************************************
[2026-02-12 16:36:23] 2026-02-12 15:35:52,038 | INFO     | 
[2026-02-12 16:36:23] 2026-02-12 15:35:52,039 | INFO     | architecture information:
[2026-02-12 16:36:23] 2026-02-12 15:35:52,039 | INFO     | executing command: cat /etc/os-release
[2026-02-12 16:36:23] 2026-02-12 15:35:52,052 | INFO     | cat /etc/os-release:
[2026-02-12 16:36:23] NAME="CentOS Linux"
[2026-02-12 16:36:23] VERSION="7 (Core)"
[2026-02-12 16:36:23] ID="centos"
[2026-02-12 16:36:23] ID_LIKE="rhel fedora"
[2026-02-12 16:36:23] VERSION_ID="7"
[2026-02-12 16:36:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 16:36:23] ANSI_COLOR="0;31"
[2026-02-12 16:36:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 16:36:23] HOME_URL="https://www.centos.org/"
[2026-02-12 16:36:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 16:36:23] 
[2026-02-12 16:36:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 16:36:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 16:36:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 16:36:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 16:36:23] 
[2026-02-12 16:36:23] 2026-02-12 15:35:52,052 | INFO     | **************************************
[2026-02-12 16:36:23] 2026-02-12 15:35:52,555 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-12 16:36:23] 2026-02-12 15:35:52,572 | INFO     | sufficient remaining disk space (227910090752 B)
[2026-02-12 16:36:23] 2026-02-12 15:35:52,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 16:36:23] 2026-02-12 15:35:52,572 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 16:36:23] 2026-02-12 15:35:52,572 | INFO     | update_server=False
[2026-02-12 16:36:23] 2026-02-12 15:35:52,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 16:36:23] 2026-02-12 15:35:52,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 16:36:23] 2026-02-12 15:35:52,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 16:36:23] 2026-02-12 15:35:52,834 | INFO     | aborting loop
[2026-02-12 16:36:23] 2026-02-12 15:35:53,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 16:36:23] 2026-02-12 15:35:53,132 | INFO     | all payload control threads have been joined
[2026-02-12 16:36:23] 2026-02-12 15:35:53,255 | INFO     | all job control threads have been joined
[2026-02-12 16:36:23] 2026-02-12 15:35:53,578 | INFO     | [job] retrieve thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:53,578 | INFO     | [job] queue monitor thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:53,601 | INFO     | all data control threads have been joined
[2026-02-12 16:36:23] 2026-02-12 15:35:53,840 | INFO     | [job] job monitor thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:53,923 | INFO     | [job] validate thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:53,926 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 16:36:23] 2026-02-12 15:35:53,974 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,068 | INFO     | [payload] failed_post thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,077 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,138 | INFO     | [payload] control thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,261 | INFO     | [job] control thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,280 | INFO     | [data] copytool_in thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,607 | INFO     | [data] control thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,613 | INFO     | [payload] validate_post thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:54,697 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:55,047 | INFO     | [data] copytool_out thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:55,072 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:57,933 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 16:36:23] 2026-02-12 15:35:59,331 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-12 16:36:23] 2026-02-12 15:36:11,822 | INFO     | [monitor] cgroup control has ended
[2026-02-12 16:36:23] 2026-02-12 15:36:12,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827741280064)>', '<ExcThread(monitor, started 139826871392000)>']
[2026-02-12 16:36:23] 2026-02-12 15:36:17,357 | INFO     | all workflow threads have been joined
[2026-02-12 16:36:23] 2026-02-12 15:36:17,358 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 16:36:23] 2026-02-12 15:36:17,358 | INFO     | traces error code: 0
[2026-02-12 16:36:23] 2026-02-12 15:36:17,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 16:36:23] 2026-02-12 15:36:23,124 | INFO     | PID=1237755 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 16:36:23] 2026-02-12 15:36:23,124 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 16:36:23] 2026-02-12 15:36:23,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 16:36:23] 2026-02-12 15:36:23,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 16:36:23] 2026-02-12 15:36:23,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 16:36:23] 2026-02-12 15:36:23,124 | INFO     | [monitor] control thread has ended
[2026-02-12 16:36:23] 2026-02-12 15:36:23,188 [wrapper] ==== pilot stdout END ====
[2026-02-12 16:36:23] 2026-02-12 15:36:23,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 16:36:23] 2026-02-12 15:36:23,196 [wrapper] pilotpid: 1237755
[2026-02-12 16:36:23] 2026-02-12 15:36:23,199 [wrapper] Pilot exit status: 0
[2026-02-12 16:36:23] 2026-02-12 15:36:23,210 [wrapper] pandaids: 7011511734
[2026-02-12 16:36:23] 2026-02-12 15:36:23,233 [wrapper] cleanup supervisor_pilot 1248626 1237756
[2026-02-12 16:36:23] 2026-02-12 15:36:23,237 [wrapper] Test setup, not cleaning
[2026-02-12 16:36:23] 2026-02-12 15:36:23,240 [wrapper] apfmon messages muted
[2026-02-12 16:36:23] 2026-02-12 15:36:23,244 [wrapper] ==== wrapper stdout END ====
[2026-02-12 16:36:23] 2026-02-12 15:36:23,248 [wrapper] ==== wrapper stderr END ====
[2026-02-12 16:36:23]  *** Error codes and diagnostics ***
[2026-02-12 16:36:23]     "exeErrorCode": 0,
[2026-02-12 16:36:23]     "exeErrorDiag": "",
[2026-02-12 16:36:23]     "pilotErrorCode": 0,
[2026-02-12 16:36:23]     "pilotErrorDiag": "",
[2026-02-12 16:36:23]  *** Listing of results directory ***
[2026-02-12 16:36:23] total 949720
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc    584627 Feb 11 04:39 pilot3.tar.gz
[2026-02-12 16:36:23] -rwx------ 1 boinc boinc     36322 Feb 11 04:42 runpilot2-wrapper.sh
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc      5111 Feb 11 04:45 queuedata.json
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc       100 Feb 12 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 16:36:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 14:50 run_atlas
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc       105 Feb 12 14:50 job.xml
[2026-02-12 16:36:23] -rw-r--r-- 2 boinc boinc 681705145 Feb 12 14:50 EVNT.48431094._000638.pool.root.1
[2026-02-12 16:36:23] -rw-r--r-- 2 boinc boinc    597958 Feb 12 14:50 input.tar.gz
[2026-02-12 16:36:23] -rw-r--r-- 2 boinc boinc     15845 Feb 12 14:50 start_atlas.sh
[2026-02-12 16:36:23] drwxrwx--x 2 boinc boinc      4096 Feb 12 14:50 shared
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc         0 Feb 12 14:50 boinc_setup_complete
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc      6369 Feb 12 14:50 init_data.xml
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc         0 Feb 12 14:50 boinc_lockfile
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc      2557 Feb 12 14:50 pandaJob.out
[2026-02-12 16:36:23] -rw------- 1 boinc boinc   1000167 Feb 12 14:50 agis_schedconf.cvmfs.json
[2026-02-12 16:36:23] -rw------- 1 boinc boinc   1512955 Feb 12 14:51 agis_ddmendpoints.agis.ALL.json
[2026-02-12 16:36:23] -rw------- 1 boinc boinc       421 Feb 12 14:51 workernode_map.json
[2026-02-12 16:36:23] drwx------ 5 boinc boinc      4096 Feb 12 14:51 pilot3
[2026-02-12 16:36:23] -rw------- 1 boinc boinc 284436549 Feb 12 16:35 HITS.48431096._027635.pool.root.1
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc       530 Feb 12 16:35 boinc_task_state.xml
[2026-02-12 16:36:23] -rw------- 1 boinc boinc        95 Feb 12 16:35 pilot_heartbeat.json
[2026-02-12 16:36:23] -rw------- 1 boinc boinc      1027 Feb 12 16:35 memory_monitor_summary.json
[2026-02-12 16:36:23] -rw------- 1 boinc boinc    318126 Feb 12 16:35 log.48431096._027635.job.log.tgz.1
[2026-02-12 16:36:23] -rw------- 1 boinc boinc      6317 Feb 12 16:35 heartbeat.json
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc        27 Feb 12 16:35 wrapper_checkpoint.txt
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc      8192 Feb 12 16:35 boinc_mmap_file
[2026-02-12 16:36:23] -rw------- 1 boinc boinc       747 Feb 12 16:36 pilotlog.txt
[2026-02-12 16:36:23] -rw------- 1 boinc boinc    909027 Feb 12 16:36 log.48431096._027635.job.log.1
[2026-02-12 16:36:23] -rw------- 1 boinc boinc       357 Feb 12 16:36 output.list
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc       620 Feb 12 16:36 runtime_log
[2026-02-12 16:36:23] -rw------- 1 boinc boinc   1249280 Feb 12 16:36 result.tar.gz
[2026-02-12 16:36:23] -rw------- 1 boinc boinc       657 Feb 12 16:36 y6UMDmzIGA9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUZjKDm81TG5m.diag
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc      8896 Feb 12 16:36 runtime_log.err
[2026-02-12 16:36:23] -rw-r--r-- 1 boinc boinc     11005 Feb 12 16:36 stderr.txt
[2026-02-12 16:36:23] HITS file was successfully produced:
[2026-02-12 16:36:23] -rw------- 1 boinc boinc 284436549 Feb 12 16:35 shared/HITS.pool.root.1
[2026-02-12 16:36:23]  *** Contents of shared directory: ***
[2026-02-12 16:36:23] total 945328
[2026-02-12 16:36:23] -rw-r--r-- 2 boinc boinc 681705145 Feb 12 14:50 ATLAS.root_0
[2026-02-12 16:36:23] -rw-r--r-- 2 boinc boinc    597958 Feb 12 14:50 input.tar.gz
[2026-02-12 16:36:23] -rw-r--r-- 2 boinc boinc     15845 Feb 12 14:50 start_atlas.sh
[2026-02-12 16:36:23] -rw------- 1 boinc boinc 284436549 Feb 12 16:35 HITS.pool.root.1
[2026-02-12 16:36:23] -rw------- 1 boinc boinc   1249280 Feb 12 16:36 result.tar.gz
16:36:24 (1233618): run_atlas exited; CPU time 23863.207674
16:36:24 (1233618): called boinc_finish(0)

</stderr_txt>
]]>

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