Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-12 10:46:50 (5224): vboxwrapper version 26210
2026-02-12 10:46:50 (5224): BOINC client version: 8.2.8
2026-02-12 10:46:51 (5224): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-12 10:46:51 (5224): Successfully copied 'init_data.xml' to the shared directory.
2026-02-12 10:46:51 (5224): Create VM. (boinc_042e22327b4cca93, slot#0)
2026-02-12 10:46:52 (5224): Setting Memory Size for VM. (4600MB)
2026-02-12 10:46:52 (5224): Setting CPU Count for VM. (6)
2026-02-12 10:46:53 (5224): Setting Chipset Options for VM.
2026-02-12 10:46:53 (5224): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-12 10:46:54 (5224): Setting Boot Options for VM.
2026-02-12 10:46:55 (5224): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-12 10:46:55 (5224): Enabling VM Network Access.
2026-02-12 10:46:56 (5224): Disabling USB Support for VM.
2026-02-12 10:46:56 (5224): Disabling COM Port Support for VM.
2026-02-12 10:46:56 (5224): Disabling LPT Port Support for VM.
2026-02-12 10:46:56 (5224): Disabling Audio Support for VM.
2026-02-12 10:46:57 (5224): Disabling Clipboard Support for VM.
2026-02-12 10:46:57 (5224): Disabling Drag and Drop Support for VM.
2026-02-12 10:46:57 (5224): Adding storage controller(s) to VM.
2026-02-12 10:46:57 (5224): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-12 10:47:00 (5224): Adding VirtualBox Guest Additions to VM.
2026-02-12 10:47:00 (5224): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-12 10:47:00 (5224): forwarding host port 58665 to guest port 80
2026-02-12 10:47:01 (5224): Enabling remote desktop for VM.
2026-02-12 10:47:01 (5224): Enabling shared directory for VM.
2026-02-12 10:47:02 (5224): Starting VM using VBoxManage interface. (boinc_042e22327b4cca93, slot#0)
2026-02-12 10:47:10 (5224): Successfully started VM. (PID = '14852')
2026-02-12 10:47:10 (5224): Reporting VM Process ID to BOINC.
2026-02-12 10:47:10 (5224): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-12 10:47:10 (5224): Guest Log: CPUID EDX: 0x178bfbff
2026-02-12 10:47:10 (5224): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-12 10:47:10 (5224): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-12 10:47:10 (5224): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-12 10:47:10 (5224): Detected: Web Application Enabled (http://localhost:58665)
2026-02-12 10:47:10 (5224): Detected: Remote Desktop Enabled (localhost:58666)
2026-02-12 10:47:10 (5224): Preference change detected
2026-02-12 10:47:10 (5224): Setting CPU throttle for VM. (50%)
2026-02-12 10:47:10 (5224): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-12 10:47:12 (5224): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-12 10:47:12 (5224): Guest Log: BIOS: Booting from Hard Disk...
2026-02-12 10:47:17 (5224): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-12 10:47:17 (5224): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-12 10:47:17 (5224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-12 10:47:28 (5224): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-12 10:47:28 (5224): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-12 10:47:43 (5224): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000114 main     Log opened 2026-02-12T10:47:41.849487000Z
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000196 main     OS Product: Linux
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000240 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000258 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000259 main     Process ID: 1340
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000259 main     Package type: LINUX_64BITS_GENERIC
2026-02-12 10:47:43 (5224): Guest Log: 00:00:00.000824 main     5.2.32 r132073 started. Verbose level = 0
2026-02-12 10:47:43 (5224): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-12 10:47:43 (5224): Guest Log: [INFO] Mounting shared directory
2026-02-12 10:47:43 (5224): Guest Log: [INFO] Checking for init_data.xml
2026-02-12 10:47:46 (5224): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-12 10:47:46 (5224): Guest Log: [INFO] Detected branch: prod
2026-02-12 10:47:47 (5224): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-12 10:47:47 (5224): Guest Log: Copying input files
2026-02-12 10:47:53 (5224): Guest Log: Copied input files into RunAtlas.
2026-02-12 10:47:53 (5224): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-12 10:47:53 (5224): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-12 10:47:53 (5224): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-12 10:47:53 (5224): Guest Log: Further information can be found at the LHC@home message board.
2026-02-12 10:48:06 (5224): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-12 10:48:07 (5224): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-12 10:48:07 (5224): Guest Log: 2.6.3.0 1616 0 32136 156152 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-12 10:48:11 (5224): Guest Log: copied the webapp to /var/www
2026-02-12 10:48:11 (5224): Guest Log: ATHENA_PROC_NUMBER=6
2026-02-12 10:48:11 (5224): Guest Log: ATHENA_CORE_NUMBER=6
2026-02-12 10:48:11 (5224): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-12 10:48:11 (5224): Guest Log:  *** Starting ATLAS job. (PandaID=7008685973 taskID=48442098) ***
2026-02-12 12:27:12 (5224): Status Report: Elapsed Time: '6000.000000'
2026-02-12 12:27:12 (5224): Status Report: CPU Time: '19631.578125'
2026-02-12 13:27:37 (5224): Guest Log:  *** Job finished ***
2026-02-12 13:27:37 (5224): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:26:42,540 | INFO     | [data] copytool_out thread has finished
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:26:43,395 | INFO     | [data] queue_monitor thread has finished
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:29,712 | INFO     | [monitor] cgroup control has ended
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:30,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140580454827840)>', '<ExcThread(monitor, started 140579497301760)>']
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:30,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:30,700 | INFO     | [monitor] control thread has ended
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,310 | INFO     | all workflow threads have been joined
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,310 | INFO     | end of generic workflow (traces error code: 0)
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,311 | INFO     | traces error code: 0
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,574 [wrapper] ==== pilot stdout END ====
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,577 [wrapper] ==== wrapper stdout RESUME ====
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,579 [wrapper] pilotpid: 6037
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,582 [wrapper] Pilot exit status: 0
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,657 [wrapper] pandaids: 7008685973
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,679 [wrapper] cleanup supervisor_pilot 26840 6038
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,682 [wrapper] Test setup, not cleaning
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,685 [wrapper] apfmon messages muted
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,688 [wrapper] ==== wrapper stdout END ====
2026-02-12 13:27:37 (5224): Guest Log: 2026-02-12 13:27:35,690 [wrapper] ==== wrapper stderr END ====
2026-02-12 13:27:37 (5224): Guest Log:  *** Error codes and diagnostics ***
2026-02-12 13:27:37 (5224): Guest Log:     "exeErrorCode": 0,
2026-02-12 13:27:37 (5224): Guest Log:     "exeErrorDiag": "",
2026-02-12 13:27:37 (5224): Guest Log:     "pilotErrorCode": 0,
2026-02-12 13:27:37 (5224): Guest Log:     "pilotErrorDiag": "",
2026-02-12 13:27:37 (5224): Guest Log:  *** Listing of results directory ***
2026-02-12 13:27:37 (5224): Guest Log: total 183852
2026-02-12 13:27:37 (5224): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 11 15:25 pilot3.tar.gz
2026-02-12 13:27:37 (5224): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 11 15:26 runpilot2-wrapper.sh
2026-02-12 13:27:37 (5224): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 11 15:28 queuedata.json
2026-02-12 13:27:37 (5224): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 12 10:47 start_atlas.sh
2026-02-12 13:27:37 (5224): Guest Log: -rwxr-xr-x. 1 atlas atlas    597954 Feb 12 10:47 input.tar.gz
2026-02-12 13:27:37 (5224): Guest Log: -rwxr-xr-x. 1 atlas atlas      8578 Feb 12 10:47 init_data.xml
2026-02-12 13:27:37 (5224): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 12 10:47 EVNT.48442096._000121.pool.root.1 -> /data/./ATLAS.root_0
2026-02-12 13:27:37 (5224): Guest Log: -rw-r--r--. 1 atlas atlas      2529 Feb 12 10:48 pandaJob.out
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas   1000188 Feb 12 10:49 agis_schedconf.cvmfs.json
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 12 10:49 agis_ddmendpoints.agis.ALL.json
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas       424 Feb 12 10:49 workernode_map.json
2026-02-12 13:27:37 (5224): Guest Log: drwx------. 5 atlas atlas      4096 Feb 12 10:49 pilot3
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas 181040568 Feb 12 13:26 HITS.48442098._006864.pool.root.1
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas        95 Feb 12 13:26 pilot_heartbeat.json
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 12 13:26 memory_monitor_summary.json
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas    390715 Feb 12 13:26 log.48442098._006864.job.log.tgz.1
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas      6364 Feb 12 13:26 heartbeat.json
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas      4680 Feb 12 13:27 pilotlog.txt
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas   1288470 Feb 12 13:27 log.48442098._006864.job.log.1
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas       357 Feb 12 13:27 output.list
2026-02-12 13:27:37 (5224): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 12 13:27 runtime_log
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas   1699840 Feb 12 13:27 result.tar.gz
2026-02-12 13:27:37 (5224): Guest Log: -rw-r--r--. 1 atlas atlas      8760 Feb 12 13:27 runtime_log.err
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas       659 Feb 12 13:27 JKoMDmFIRA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnfjKDmu9Q0Pm.diag
2026-02-12 13:27:37 (5224): Guest Log: Looking for outputfile HITS.48442098._006864.pool.root.1
2026-02-12 13:27:37 (5224): Guest Log: HITS file was successfully produced
2026-02-12 13:27:37 (5224): Guest Log: -rw-------. 1 atlas atlas 181040568 Feb 12 13:26 /home/atlas/RunAtlas/HITS.48442098._006864.pool.root.1
2026-02-12 13:27:38 (5224): Guest Log: Successfully finished the ATLAS job!
2026-02-12 13:27:38 (5224): Guest Log: Copying the results back to the shared directory!
2026-02-12 13:27:38 (5224): Guest Log:  *** Contents of shared directory: ***
2026-02-12 13:27:38 (5224): Guest Log: total 664380
2026-02-12 13:27:38 (5224): Guest Log: -rwxrwxrwx. 1 root root 496954356 Feb 12 10:46 ATLAS.root_0
2026-02-12 13:27:38 (5224): Guest Log: -rwxrwxrwx. 1 root root 181040568 Feb 12 13:27 HITS.pool.root.1
2026-02-12 13:27:38 (5224): Guest Log: -rwxrwxrwx. 1 root root      8578 Feb 12 10:46 init_data.xml
2026-02-12 13:27:38 (5224): Guest Log: -rwxrwxrwx. 1 root root    597954 Feb 11 21:21 input.tar.gz
2026-02-12 13:27:38 (5224): Guest Log: -rwxrwxrwx. 1 root root   1699840 Feb 12  2026 result.tar.gz
2026-02-12 13:27:38 (5224): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 11 21:21 start_atlas.sh
2026-02-12 13:27:38 (5224): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-12 13:27:38 (5224): VM Completion File Detected.
2026-02-12 13:27:38 (5224): Powering off VM.
2026-02-12 13:27:38 (5224): Successfully stopped VM.
2026-02-12 13:27:38 (5224): Deregistering VM. (boinc_042e22327b4cca93, slot#0)
2026-02-12 13:27:39 (5224): Removing network bandwidth throttle group from VM.
2026-02-12 13:27:39 (5224): Removing VM from VirtualBox.
2026-02-12 13:27:44 (5224): called boinc_finish(0)

</stderr_txt>
]]>

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