Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-13 11:05:53 (3896): vboxwrapper version 26210
2026-02-13 11:05:53 (3896): BOINC client version: 8.2.4
2026-02-13 11:05:53 (3896): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-13 11:05:53 (3896): Successfully copied 'init_data.xml' to the shared directory.
2026-02-13 11:05:54 (3896): Create VM. (boinc_1fb7dc6ea29049fd, slot#0)
2026-02-13 11:05:54 (3896): Setting Memory Size for VM. (4800MB)
2026-02-13 11:05:54 (3896): Setting CPU Count for VM. (8)
2026-02-13 11:05:55 (3896): Setting Chipset Options for VM.
2026-02-13 11:05:55 (3896): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-13 11:05:55 (3896): Setting Boot Options for VM.
2026-02-13 11:05:56 (3896): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-13 11:05:56 (3896): Enabling VM Network Access.
2026-02-13 11:05:56 (3896): Disabling USB Support for VM.
2026-02-13 11:05:56 (3896): Disabling COM Port Support for VM.
2026-02-13 11:05:57 (3896): Disabling LPT Port Support for VM.
2026-02-13 11:05:57 (3896): Disabling Audio Support for VM.
2026-02-13 11:05:57 (3896): Disabling Clipboard Support for VM.
2026-02-13 11:05:57 (3896): Disabling Drag and Drop Support for VM.
2026-02-13 11:05:58 (3896): Adding storage controller(s) to VM.
2026-02-13 11:05:58 (3896): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-13 11:05:58 (3896): Adding VirtualBox Guest Additions to VM.
2026-02-13 11:05:59 (3896): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-13 11:05:59 (3896): forwarding host port 53719 to guest port 80
2026-02-13 11:05:59 (3896): Enabling remote desktop for VM.
2026-02-13 11:06:00 (3896): Required extension pack not installed, remote desktop not enabled.
2026-02-13 11:06:00 (3896): Enabling shared directory for VM.
2026-02-13 11:06:00 (3896): Starting VM using VBoxManage interface. (boinc_1fb7dc6ea29049fd, slot#0)
2026-02-13 11:06:04 (3896): Successfully started VM. (PID = '11648')
2026-02-13 11:06:04 (3896): Reporting VM Process ID to BOINC.
2026-02-13 11:06:04 (3896): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-13 11:06:04 (3896): Guest Log: CPUID EDX: 0x178bfbff
2026-02-13 11:06:04 (3896): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-13 11:06:04 (3896): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-13 11:06:04 (3896): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-13 11:06:04 (3896): Detected: Web Application Enabled (http://localhost:53719)
2026-02-13 11:06:04 (3896): Preference change detected
2026-02-13 11:06:04 (3896): Setting CPU throttle for VM. (100%)
2026-02-13 11:06:04 (3896): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-13 11:06:06 (3896): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-13 11:06:06 (3896): Guest Log: BIOS: Booting from Hard Disk...
2026-02-13 11:06:08 (3896): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-13 11:06:08 (3896): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-13 11:06:08 (3896): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-13 11:06:13 (3896): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-13 11:06:13 (3896): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-13 11:06:16 (3896): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000053 main     Log opened 2026-02-13T11:06:14.539138000Z
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000115 main     OS Product: Linux
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000126 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000136 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000146 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000146 main     Process ID: 1373
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000146 main     Package type: LINUX_64BITS_GENERIC
2026-02-13 11:06:16 (3896): Guest Log: 00:00:00.000779 main     5.2.32 r132073 started. Verbose level = 0
2026-02-13 11:06:16 (3896): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-13 11:06:16 (3896): Guest Log: [INFO] Mounting shared directory
2026-02-13 11:06:16 (3896): Guest Log: [INFO] Checking for init_data.xml
2026-02-13 11:06:20 (3896): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-13 11:06:20 (3896): Guest Log: [INFO] Detected branch: prod
2026-02-13 11:06:21 (3896): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-13 11:06:21 (3896): Guest Log: Copying input files
2026-02-13 11:06:22 (3896): Guest Log: Copied input files into RunAtlas.
2026-02-13 11:06:22 (3896): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-13 11:06:22 (3896): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-13 11:06:22 (3896): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-13 11:06:22 (3896): Guest Log: Further information can be found at the LHC@home message board.
2026-02-13 11:06:26 (3896): Guest Log: 00:00:10.004779 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 957 738 000ns (GuestNow=1 770 977 185 583 051 000 ns GuestLast=1 770 980 774 540 789 000 ns fSetTimeLastLoop=true )
2026-02-13 11:06:31 (3896): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-13 11:06:32 (3896): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-13 11:06:32 (3896): Guest Log: 2.6.3.0 1648 0 32192 156189 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-13 11:06:32 (3896): Guest Log: copied the webapp to /var/www
2026-02-13 11:06:32 (3896): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-13 11:06:32 (3896): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-13 11:06:32 (3896): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-13 11:06:32 (3896): Guest Log:  *** Starting ATLAS job. (PandaID=6994197550 taskID=48318042) ***
2026-02-13 12:23:43 (3896): Guest Log:  *** Job finished ***
2026-02-13 12:23:43 (3896): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:26,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:33,970 [wrapper] supervise_pilot (15 min periods counter: 6)
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:34,711 | INFO     | [monitor] cgroup control has ended
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:35,723 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607005058880)>', '<ExcThread(monitor, started 140606340847360)>']
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:36,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:36,402 | INFO     | [monitor] control thread has ended
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,736 | INFO     | all workflow threads have been joined
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,736 | INFO     | end of generic workflow (traces error code: 0)
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,736 | INFO     | traces error code: 0
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,828 [wrapper] ==== pilot stdout END ====
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,831 [wrapper] ==== wrapper stdout RESUME ====
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,834 [wrapper] pilotpid: 6102
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,837 [wrapper] Pilot exit status: 0
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,890 [wrapper] pandaids: 6994197550
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,909 [wrapper] cleanup supervisor_pilot 25576 6103
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,912 [wrapper] Test setup, not cleaning
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,915 [wrapper] apfmon messages muted
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,918 [wrapper] ==== wrapper stdout END ====
2026-02-13 12:23:43 (3896): Guest Log: 2026-02-13 11:23:40,921 [wrapper] ==== wrapper stderr END ====
2026-02-13 12:23:43 (3896): Guest Log:  *** Error codes and diagnostics ***
2026-02-13 12:23:43 (3896): Guest Log:     "exeErrorCode": 0,
2026-02-13 12:23:43 (3896): Guest Log:     "exeErrorDiag": "",
2026-02-13 12:23:43 (3896): Guest Log:     "pilotErrorCode": 0,
2026-02-13 12:23:43 (3896): Guest Log:     "pilotErrorDiag": "",
2026-02-13 12:23:43 (3896): Guest Log:  *** Listing of results directory ***
2026-02-13 12:23:43 (3896): Guest Log: total 189912
2026-02-13 12:23:43 (3896): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  3 15:10 pilot3.tar.gz
2026-02-13 12:23:43 (3896): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  3 15:11 runpilot2-wrapper.sh
2026-02-13 12:23:43 (3896): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  3 15:12 queuedata.json
2026-02-13 12:23:43 (3896): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 13 10:06 start_atlas.sh
2026-02-13 12:23:43 (3896): Guest Log: -rwxr-xr-x. 1 atlas atlas    597766 Feb 13 10:06 input.tar.gz
2026-02-13 12:23:43 (3896): Guest Log: -rwxr-xr-x. 1 atlas atlas      9665 Feb 13 10:06 init_data.xml
2026-02-13 12:23:43 (3896): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 13 10:06 EVNT.48318040._000155.pool.root.1 -> /data/./ATLAS.root_0
2026-02-13 12:23:43 (3896): Guest Log: -rw-r--r--. 1 atlas atlas      2536 Feb 13 10:06 pandaJob.out
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas   1000262 Feb 13 10:09 agis_schedconf.cvmfs.json
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 13 10:09 agis_ddmendpoints.agis.ALL.json
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas       433 Feb 13 10:09 workernode_map.json
2026-02-13 12:23:43 (3896): Guest Log: drwx------. 5 atlas atlas      4096 Feb 13 10:09 pilot3
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas 188637717 Feb 13 11:22 HITS.48318042._008003.pool.root.1
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas        95 Feb 13 11:22 pilot_heartbeat.json
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 13 11:22 memory_monitor_summary.json
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas    350193 Feb 13 11:22 log.48318042._008003.job.log.tgz.1
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas      6348 Feb 13 11:22 heartbeat.json
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas      4873 Feb 13 11:23 pilotlog.txt
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas    632771 Feb 13 11:23 log.48318042._008003.job.log.1
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas       357 Feb 13 11:23 output.list
2026-02-13 12:23:43 (3896): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 13 11:23 runtime_log
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas   1003520 Feb 13 11:23 result.tar.gz
2026-02-13 12:23:43 (3896): Guest Log: -rw-r--r--. 1 atlas atlas      8832 Feb 13 11:23 runtime_log.err
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas       680 Feb 13 11:23 qy4MDmnEX78n9Rq4apOajLDm4fhM0noT9bVooX4SDm5qUKDmgtHyOn.diag
2026-02-13 12:23:43 (3896): Guest Log: Looking for outputfile HITS.48318042._008003.pool.root.1
2026-02-13 12:23:43 (3896): Guest Log: HITS file was successfully produced
2026-02-13 12:23:43 (3896): Guest Log: -rw-------. 1 atlas atlas 188637717 Feb 13 11:22 /home/atlas/RunAtlas/HITS.48318042._008003.pool.root.1
2026-02-13 12:23:44 (3896): Guest Log: Successfully finished the ATLAS job!
2026-02-13 12:23:44 (3896): Guest Log: Copying the results back to the shared directory!
2026-02-13 12:23:44 (3896): Guest Log:  *** Contents of shared directory: ***
2026-02-13 12:23:44 (3896): Guest Log: total 669796
2026-02-13 12:23:44 (3896): Guest Log: -rwxrwxrwx. 1 root root 495595866 Feb 13 10:05 ATLAS.root_0
2026-02-13 12:23:44 (3896): Guest Log: -rwxrwxrwx. 1 root root 188637717 Feb 13  2026 HITS.pool.root.1
2026-02-13 12:23:44 (3896): Guest Log: -rwxrwxrwx. 1 root root      9665 Feb 13 10:05 init_data.xml
2026-02-13 12:23:44 (3896): Guest Log: -rwxrwxrwx. 1 root root    597766 Feb 11 21:08 input.tar.gz
2026-02-13 12:23:44 (3896): Guest Log: -rwxrwxrwx. 1 root root   1003520 Feb 13  2026 result.tar.gz
2026-02-13 12:23:44 (3896): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 11 21:08 start_atlas.sh
2026-02-13 12:23:44 (3896): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-13 12:23:44 (3896): VM Completion File Detected.
2026-02-13 12:23:44 (3896): Powering off VM.
2026-02-13 12:23:44 (3896): Successfully stopped VM.
2026-02-13 12:23:44 (3896): Deregistering VM. (boinc_1fb7dc6ea29049fd, slot#0)
2026-02-13 12:23:44 (3896): Removing network bandwidth throttle group from VM.
2026-02-13 12:23:44 (3896): Removing VM from VirtualBox.
2026-02-13 12:23:50 (3896): called boinc_finish(0)

</stderr_txt>
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