Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:38:30 (28519): wrapper (7.7.26015): starting
02:38:30 (28519): wrapper: running run_atlas (--nthreads 8)
[2026-02-12 02:38:30] Arguments: --nthreads 8
[2026-02-12 02:38:30] Threads: 8
[2026-02-12 02:38:30] Checking for CVMFS
[2026-02-12 02:38:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 02:38:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 02:38:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 02:38:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 02:38:31] 2.11.0.0 4593 177842 89680 156135 3 186 3784063 4096001 267 130560 3 10841099 99.619 9890303 464 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-12 02:38:31] CVMFS is ok
[2026-02-12 02:38:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 02:38:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 02:38:31] Further information can be found at the LHC@home message board.
[2026-02-12 02:38:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 02:38:31] Checking for apptainer binary...
[2026-02-12 02:38:31] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-12 02:38:31] apptainer is not installed, using version from CVMFS
[2026-02-12 02:38:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 02:38:31] WARNING: Environment variable TMPDIR already has value [/tmp/job_11089022/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node037
[2026-02-12 02:38:31] apptainer works
[2026-02-12 02:38:31] Set ATHENA_PROC_NUMBER=8
[2026-02-12 02:38:31] Set ATHENA_CORE_NUMBER=8
[2026-02-12 02:38:31] Starting ATLAS job with PandaID=7010141708
[2026-02-12 02:38:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11089022/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 04:09:50]  *** The last 200 lines of the pilot log: ***
[2026-02-12 04:09:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 04:09:50]  is_altstaged=None
[2026-02-12 04:09:50]  is_tar=False
[2026-02-12 04:09:50]  lfn=log.48431096._023795.job.log.tgz.1
[2026-02-12 04:09:50]  mtime=0
[2026-02-12 04:09:50]  protocol_id=None
[2026-02-12 04:09:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 04:09:50]  replicas=None
[2026-02-12 04:09:50]  scope=mc23_13p6TeV
[2026-02-12 04:09:50]  status=None
[2026-02-12 04:09:50]  status_code=0
[2026-02-12 04:09:50]  storage_token=
[2026-02-12 04:09:50]  surl=/tmp/job_11089022/atlas/pilot/slots/0/PanDA_Pilot-7010141708/log.48431096._023795.job.log.tgz.1
[2026-02-12 04:09:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/87/log.48431096._023795.job.log.tgz.1
[2026-02-12 04:09:50]  workdir=None
[2026-02-12 04:09:50] ]
[2026-02-12 04:09:50] 2026-02-12 03:08:54,416 | INFO     | transferring file log.48431096._023795.job.log.tgz.1 from /tmp/job_11089022/atlas/pilot/slots/0/PanDA_Pilot-7010141708/log.48431096._023795.job.log.tgz.1 to /tmp/j
[2026-02-12 04:09:50] 2026-02-12 03:08:54,417 | INFO     | executing command: /usr/bin/env mv /tmp/job_11089022/atlas/pilot/slots/0/PanDA_Pilot-7010141708/log.48431096._023795.job.log.tgz.1 /tmp/job_11089022/atlas/pilot/sl
[2026-02-12 04:09:50] 2026-02-12 03:08:54,424 | INFO     | adding to output.list: log.48431096._023795.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/87/log.48431096._023795.job.log.tg
[2026-02-12 04:09:50] 2026-02-12 03:08:54,424 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 04:09:50] 2026-02-12 03:08:54,425 | INFO     | summary of transferred files:
[2026-02-12 04:09:50] 2026-02-12 03:08:54,425 | INFO     |  -- lfn=log.48431096._023795.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 04:09:50] 2026-02-12 03:08:54,425 | INFO     | stage-out finished correctly
[2026-02-12 04:09:50] 2026-02-12 03:08:54,760 | INFO     | monitor loop #407: job 0:7010141708 is in state 'finished'
[2026-02-12 04:09:50] 2026-02-12 03:08:54,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 04:09:50] 2026-02-12 03:08:55,953 | INFO     | time since job start (5418s) is within the limit (349056.0s)
[2026-02-12 04:09:50] 2026-02-12 03:08:56,566 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 04:09:50] 2026-02-12 03:08:57,263 | INFO     | monitor loop #408: job 0:7010141708 is in state 'finished'
[2026-02-12 04:09:50] 2026-02-12 03:08:57,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 04:09:50] 2026-02-12 03:08:57,959 | INFO     | time since job start (5420s) is within the limit (349056.0s)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,507 | INFO     | job 7010141708 has state=finished
[2026-02-12 04:09:50] 2026-02-12 03:08:59,508 | INFO     | preparing for final server update for job 7010141708 in state='finished'
[2026-02-12 04:09:50] 2026-02-12 03:08:59,508 | INFO     | reading metadata from: /tmp/job_11089022/atlas/pilot/slots/0/PanDA_Pilot-7010141708/jobReport.json
[2026-02-12 04:09:50] 2026-02-12 03:08:59,509 | INFO     | added worker_node to metadata from /tmp/job_11089022/atlas/pilot/slots/0/workernode_map.json
[2026-02-12 04:09:50] 2026-02-12 03:08:59,509 | INFO     | this job has now completed (state=finished)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,509 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,509 | INFO     | log transfer has been attempted: DONE
[2026-02-12 04:09:50] 2026-02-12 03:08:59,509 | INFO     | job 7010141708 has finished - writing final server update
[2026-02-12 04:09:50] 2026-02-12 03:08:59,509 | INFO     | total number of processed events: 400 (read)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,527 | INFO     | using path: /tmp/job_11089022/atlas/pilot/slots/0/PanDA_Pilot-7010141708/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,527 | INFO     | extracted standard info from prmon json
[2026-02-12 04:09:50] 2026-02-12 03:08:59,528 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 04:09:50] 2026-02-12 03:08:59,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 04:09:50] 2026-02-12 03:08:59,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 04:09:50] 2026-02-12 03:08:59,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | fitting pss+swap vs Time
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | sum of square deviations: 170944600.5
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | sum of deviations: 46085222815.99999
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | mean x: 1770863108.5
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | mean y: 2312818.463414634
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | intersect: -477407448549.55865
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | chi2: 3.461024523500088
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | current memory leak: 269.59 B/s (using 82 data points, chi2=3.46)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,529 | INFO     | could have reported an average CPU frequency of 2364 MHz (6 samples)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | ..............................
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . Timing measurements:
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . get job = 0 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . initial setup = 2 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . payload setup = 2 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . stage-in = 0 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . payload execution = 5399 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . stage-out = 0 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | . log creation = 0 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,530 | INFO     | ..............................
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | 
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | job summary report
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | --------------------------------------------------
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | PanDA job id: 7010141708
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | task id: 48431096
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | errors: (none)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | pilot state: finished 
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | transexitcode: 0
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | exeerrorcode: 0
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | exeerrordiag: 
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | exitcode: 0
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | exitmsg: OK
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | cpuconsumptiontime: 30705 s
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | nevents: 400
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | neventsw: 0
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | pid: 6720
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | pgrp: 6720
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | corecount: 8
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | event service: False
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | sizes: {0: 2282340, 11: 2282340, 5405: 2308900, 5406: 2317928, 5408: 2317984, 5411: 2318178}
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | --------------------------------------------------
[2026-02-12 04:09:50] 2026-02-12 03:08:59,577 | INFO     | 
[2026-02-12 04:09:50] 2026-02-12 03:08:59,578 | INFO     | executing command: ls -lF /tmp/job_11089022/atlas/pilot/slots/0
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | job 7010141708 has completed (purged errors)
[2026-02-12 04:09:50] 2026-02-12 03:08:59,589 | INFO     | overall cleanup function is called
[2026-02-12 04:09:50] 2026-02-12 03:09:00,594 | INFO     | --- collectZombieJob: --- 10, [6720]
[2026-02-12 04:09:50] 2026-02-12 03:09:00,594 | INFO     | zombie collector waiting for pid 6720
[2026-02-12 04:09:50] 2026-02-12 03:09:00,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 04:09:50] 2026-02-12 03:09:00,594 | INFO     | collected zombie processes
[2026-02-12 04:09:50] 2026-02-12 03:09:00,594 | INFO     | will attempt to kill all subprocesses of pid=6720
[2026-02-12 04:09:50] 2026-02-12 03:09:00,701 | INFO     | process IDs to be killed: [6720] (in reverse order)
[2026-02-12 04:09:50] 2026-02-12 03:09:00,738 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 04:09:50] 2026-02-12 03:09:00,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 04:09:50] 2026-02-12 03:09:00,742 | INFO     | did not find any defunct processes belonging to 6720
[2026-02-12 04:09:50] 2026-02-12 03:09:00,745 | INFO     | did not find any defunct processes belonging to 6720
[2026-02-12 04:09:50] 2026-02-12 03:09:00,746 | INFO     | ready for new job
[2026-02-12 04:09:50] 2026-02-12 03:09:00,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 04:09:50] 2026-02-12 03:09:00,746 | INFO     | **************************************
[2026-02-12 04:09:50] 2026-02-12 03:09:00,746 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 04:09:50] 2026-02-12 03:09:00,746 | INFO     | **************************************
[2026-02-12 04:09:50] 2026-02-12 03:09:00,746 | INFO     | 
[2026-02-12 04:09:50] 2026-02-12 03:09:00,761 | INFO     | architecture information:
[2026-02-12 04:09:50] 2026-02-12 03:09:00,761 | INFO     | executing command: cat /etc/os-release
[2026-02-12 04:09:50] 2026-02-12 03:09:00,767 | INFO     | cat /etc/os-release:
[2026-02-12 04:09:50] NAME="CentOS Linux"
[2026-02-12 04:09:50] VERSION="7 (Core)"
[2026-02-12 04:09:50] ID="centos"
[2026-02-12 04:09:50] ID_LIKE="rhel fedora"
[2026-02-12 04:09:50] VERSION_ID="7"
[2026-02-12 04:09:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 04:09:50] ANSI_COLOR="0;31"
[2026-02-12 04:09:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 04:09:50] HOME_URL="https://www.centos.org/"
[2026-02-12 04:09:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 04:09:50] 
[2026-02-12 04:09:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 04:09:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 04:09:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 04:09:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 04:09:50] 
[2026-02-12 04:09:50] 2026-02-12 03:09:00,767 | INFO     | **************************************
[2026-02-12 04:09:50] 2026-02-12 03:09:01,270 | INFO     | executing command: df -mP /tmp/job_11089022/atlas/pilot/slots/0
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | INFO     | sufficient remaining disk space (220644507648 B)
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | INFO     | update_server=False
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:09:50] 2026-02-12 03:09:01,276 | INFO     | aborting loop
[2026-02-12 04:09:50] 2026-02-12 03:09:01,402 | INFO     | all job control threads have been joined
[2026-02-12 04:09:50] 2026-02-12 03:09:01,844 | INFO     | all data control threads have been joined
[2026-02-12 04:09:50] 2026-02-12 03:09:02,035 | INFO     | all payload control threads have been joined
[2026-02-12 04:09:50] 2026-02-12 03:09:02,281 | INFO     | [job] retrieve thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:02,281 | INFO     | [job] queue monitor thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:02,281 | INFO     | [job] job monitor thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:02,326 | INFO     | [payload] validate_post thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:02,407 | INFO     | [job] control thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:02,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 04:09:50] 2026-02-12 03:09:02,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 04:09:50] 2026-02-12 03:09:02,699 | INFO     | [payload] failed_post thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:02,849 | INFO     | [data] control thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:03,040 | INFO     | [payload] control thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:03,279 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:03,386 | INFO     | [job] validate thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:03,474 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:03,520 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:03,571 | INFO     | [data] copytool_in thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:04,487 | INFO     | [data] copytool_out thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:06,623 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:12,329 | INFO     | job.realtimelogging is not enabled
[2026-02-12 04:09:50] 2026-02-12 03:09:13,334 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 04:09:50] 2026-02-12 03:09:31,150 | INFO     | PID=887 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-02-12 04:09:50] 2026-02-12 03:09:31,150 | INFO     | .. there are 4 such processes running
[2026-02-12 04:09:50] 2026-02-12 03:09:31,150 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 04:09:50] 2026-02-12 03:09:31,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 04:09:50] 2026-02-12 03:09:31,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 04:09:50] 2026-02-12 03:09:45,333 | INFO     | [monitor] cgroup control has ended
[2026-02-12 04:09:50] 2026-02-12 03:09:45,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456054785792)>']
[2026-02-12 04:09:50] 2026-02-12 03:09:46,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 04:09:50] 2026-02-12 03:09:46,224 | INFO     | [monitor] control thread has ended
[2026-02-12 04:09:50] 2026-02-12 03:09:50,429 | INFO     | all workflow threads have been joined
[2026-02-12 04:09:50] 2026-02-12 03:09:50,429 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 04:09:50] 2026-02-12 03:09:50,429 | INFO     | traces error code: 0
[2026-02-12 04:09:50] 2026-02-12 03:09:50,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 04:09:50] 2026-02-12 03:09:50,482 [wrapper] ==== pilot stdout END ====
[2026-02-12 04:09:50] 2026-02-12 03:09:50,483 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 04:09:50] 2026-02-12 03:09:50,484 [wrapper] pilotpid: 887
[2026-02-12 04:09:50] 2026-02-12 03:09:50,485 [wrapper] Pilot exit status: 0
[2026-02-12 04:09:50] 2026-02-12 03:09:50,489 [wrapper] pandaids: 7010141708
[2026-02-12 04:09:50] 2026-02-12 03:09:50,514 [wrapper] cleanup supervisor_pilot 26460 888
[2026-02-12 04:09:50] 2026-02-12 03:09:50,515 [wrapper] Test setup, not cleaning
[2026-02-12 04:09:50] 2026-02-12 03:09:50,516 [wrapper] apfmon messages muted
[2026-02-12 04:09:50] 2026-02-12 03:09:50,517 [wrapper] ==== wrapper stdout END ====
[2026-02-12 04:09:50] 2026-02-12 03:09:50,518 [wrapper] ==== wrapper stderr END ====
[2026-02-12 04:09:50]  *** Error codes and diagnostics ***
[2026-02-12 04:09:50]     "exeErrorCode": 0,
[2026-02-12 04:09:50]     "exeErrorDiag": "",
[2026-02-12 04:09:50]     "pilotErrorCode": 0,
[2026-02-12 04:09:50]     "pilotErrorDiag": "",
[2026-02-12 04:09:50]  *** Listing of results directory ***
[2026-02-12 04:09:50] total 942928
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user    584627 Feb 10 11:23 pilot3.tar.gz
[2026-02-12 04:09:50] -rwx------ 1 mf493845 unix-user     36322 Feb 10 11:27 runpilot2-wrapper.sh
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      5111 Feb 10 11:28 queuedata.json
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user       100 Feb 12 00:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 04:09:50] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb 12 00:32 run_atlas
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user       105 Feb 12 00:32 job.xml
[2026-02-12 04:09:50] -rw-r--r-- 2 mf493845 unix-user 679001826 Feb 12 02:38 EVNT.48431094._000519.pool.root.1
[2026-02-12 04:09:50] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 12 02:38 start_atlas.sh
[2026-02-12 04:09:50] drwxrwx--x 2 mf493845 unix-user       100 Feb 12 02:38 shared
[2026-02-12 04:09:50] -rw-r--r-- 2 mf493845 unix-user    597968 Feb 12 02:38 input.tar.gz
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      6390 Feb 12 02:38 init_data.xml
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user         0 Feb 12 02:38 boinc_setup_complete
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      8192 Feb 12 02:38 boinc_mmap_file
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user         0 Feb 12 02:38 boinc_lockfile
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      2556 Feb 12 02:38 pandaJob.out
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user   1005057 Feb 12 02:38 agis_schedconf.cvmfs.json
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user   1512955 Feb 12 02:38 agis_ddmendpoints.agis.ALL.json
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user       420 Feb 12 02:38 workernode_map.json
[2026-02-12 04:09:50] drwx------ 5 mf493845 unix-user       440 Feb 12 02:38 pilot3
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user 280369857 Feb 12 04:08 HITS.48431096._023795.pool.root.1
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user        95 Feb 12 04:08 pilot_heartbeat.json
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      1032 Feb 12 04:08 memory_monitor_summary.json
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user    325585 Feb 12 04:08 log.48431096._023795.job.log.tgz.1
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      6324 Feb 12 04:08 heartbeat.json
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      4901 Feb 12 04:09 pilotlog.txt
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user    811830 Feb 12 04:09 log.48431096._023795.job.log.1
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user       357 Feb 12 04:09 output.list
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user       620 Feb 12 04:09 runtime_log
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user   1157120 Feb 12 04:09 result.tar.gz
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user      9219 Feb 12 04:09 runtime_log.err
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user       644 Feb 12 04:09 3uuKDma8z98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNzhKDmqMDAtn.diag
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user     21918 Feb 12 04:09 stderr.txt
[2026-02-12 04:09:50] HITS file was successfully produced:
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user 280369857 Feb 12 04:08 shared/HITS.pool.root.1
[2026-02-12 04:09:50]  *** Contents of shared directory: ***
[2026-02-12 04:09:50] total 938620
[2026-02-12 04:09:50] -rw-r--r-- 2 mf493845 unix-user 679001826 Feb 12 02:38 ATLAS.root_0
[2026-02-12 04:09:50] -rw-r--r-- 2 mf493845 unix-user     15845 Feb 12 02:38 start_atlas.sh
[2026-02-12 04:09:50] -rw-r--r-- 2 mf493845 unix-user    597968 Feb 12 02:38 input.tar.gz
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user 280369857 Feb 12 04:08 HITS.pool.root.1
[2026-02-12 04:09:50] -rw------- 1 mf493845 unix-user   1157120 Feb 12 04:09 result.tar.gz
04:09:52 (28519): run_atlas exited; CPU time 30785.048590
04:09:52 (28519): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN