Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:21:01 (19056): wrapper (7.7.26015): starting
15:21:01 (19056): wrapper: running run_atlas (--nthreads 8)
[2026-02-11 15:21:01] Arguments: --nthreads 8
[2026-02-11 15:21:01] Threads: 8
[2026-02-11 15:21:01] Checking for CVMFS
[2026-02-11 15:21:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 15:21:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 15:21:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 15:21:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 15:21:02] 2.11.2.0 8814 229014 147632 156128 1 50 18412129 18432000 1833 130560 0 152806350 99.981 8641907 31885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-11 15:21:02] CVMFS is ok
[2026-02-11 15:21:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 15:21:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 15:21:02] Further information can be found at the LHC@home message board.
[2026-02-11 15:21:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 15:21:02] Checking for apptainer binary...
[2026-02-11 15:21:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 15:21:02] Running /usr/bin/apptainer --version
[2026-02-11 15:21:02] apptainer version 1.3.2-1.el7
[2026-02-11 15:21:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 15:21:03] c-206-19.aglt2.org
[2026-02-11 15:21:03] apptainer works
[2026-02-11 15:21:03] Set ATHENA_PROC_NUMBER=8
[2026-02-11 15:21:03] Set ATHENA_CORE_NUMBER=8
[2026-02-11 15:21:03] Starting ATLAS job with PandaID=7008682341
[2026-02-11 15:21:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 18:24:42]  *** The last 200 lines of the pilot log: ***
[2026-02-11 18:24:42] 2026-02-11 23:24:06,676 | INFO     | preparing for final server update for job 7008682341 in state='finished'
[2026-02-11 18:24:42] 2026-02-11 23:24:06,752 | INFO     | PID=23076 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 18:24:42] 2026-02-11 23:24:06,752 | INFO     | .. there are 3 such processes running
[2026-02-11 18:24:42] 2026-02-11 23:24:06,760 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,760 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7008682341/jobReport.json
[2026-02-11 18:24:42] 2026-02-11 23:24:06,763 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-11 18:24:42] 2026-02-11 23:24:06,763 | INFO     | this job has now completed (state=finished)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,764 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,764 | INFO     | log transfer has been attempted: DONE
[2026-02-11 18:24:42] 2026-02-11 23:24:06,764 | INFO     | job 7008682341 has finished - writing final server update
[2026-02-11 18:24:42] 2026-02-11 23:24:06,764 | INFO     | total number of processed events: 400 (read)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,769 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7008682341/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,770 | INFO     | extracted standard info from prmon json
[2026-02-11 18:24:42] 2026-02-11 23:24:06,770 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 18:24:42] 2026-02-11 23:24:06,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 18:24:42] 2026-02-11 23:24:06,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 18:24:42] 2026-02-11 23:24:06,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 18:24:42] 2026-02-11 23:24:06,776 | INFO     | fitting pss+swap vs Time
[2026-02-11 18:24:42] 2026-02-11 23:24:06,776 | INFO     | sum of square deviations: 1808350185.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,778 | INFO     | sum of deviations: -16272560690.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,778 | INFO     | mean x: 1770846748.5
[2026-02-11 18:24:42] 2026-02-11 23:24:06,778 | INFO     | mean y: 2534522.533333333
[2026-02-11 18:24:42] 2026-02-11 23:24:06,778 | INFO     | intersect: 15937618018.352709
[2026-02-11 18:24:42] 2026-02-11 23:24:06,779 | INFO     | chi2: 1.6261511760838685
[2026-02-11 18:24:42] 2026-02-11 23:24:06,779 | INFO     | sum of square deviations: 1661798600.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,781 | INFO     | sum of deviations: -15373753505.999996
[2026-02-11 18:24:42] 2026-02-11 23:24:06,781 | INFO     | mean x: 1770846596.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,781 | INFO     | mean y: 2535459.6228571427
[2026-02-11 18:24:42] 2026-02-11 23:24:06,781 | INFO     | intersect: 16385121811.44862
[2026-02-11 18:24:42] 2026-02-11 23:24:06,782 | INFO     | chi2: 1.6248871264726406
[2026-02-11 18:24:42] 2026-02-11 23:24:06,782 | INFO     | current chi2=1.6248871264726406 (change=0.0777326013607208 %)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,782 | INFO     | right removable region: 174
[2026-02-11 18:24:42] 2026-02-11 23:24:06,782 | INFO     | sum of square deviations: 1661798600.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,784 | INFO     | sum of deviations: -42739841174.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,784 | INFO     | mean x: 1770846901.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,784 | INFO     | mean y: 2561709.977142857
[2026-02-11 18:24:42] 2026-02-11 23:24:06,784 | INFO     | intersect: 45547018957.81097
[2026-02-11 18:24:42] 2026-02-11 23:24:06,785 | INFO     | chi2: 0.2081630393157982
[2026-02-11 18:24:42] 2026-02-11 23:24:06,785 | INFO     | current chi2=0.2081630393157982 (change=87.19903522026156 %)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,786 | INFO     | sum of square deviations: 1523386702.5
[2026-02-11 18:24:42] 2026-02-11 23:24:06,787 | INFO     | sum of deviations: -43851098182.0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,787 | INFO     | mean x: 1770847053.5
[2026-02-11 18:24:42] 2026-02-11 23:24:06,787 | INFO     | mean y: 2562876.564705882
[2026-02-11 18:24:42] 2026-02-11 23:24:06,787 | INFO     | intersect: 50976874179.72768
[2026-02-11 18:24:42] 2026-02-11 23:24:06,788 | INFO     | chi2: 0.171317339440783
[2026-02-11 18:24:42] 2026-02-11 23:24:06,788 | INFO     | current chi2=0.171317339440783 (change=17.700404450339345 %)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,788 | INFO     | left removable region: 20
[2026-02-11 18:24:42] 2026-02-11 23:24:06,789 | INFO     | sum of square deviations: 1132458442.5
[2026-02-11 18:24:42] 2026-02-11 23:24:06,790 | INFO     | sum of deviations: -33319534161.499996
[2026-02-11 18:24:42] 2026-02-11 23:24:06,790 | INFO     | mean x: 1770847175.5
[2026-02-11 18:24:42] 2026-02-11 23:24:06,790 | INFO     | mean y: 2553906.214285714
[2026-02-11 18:24:42] 2026-02-11 23:24:06,790 | INFO     | intersect: 52104954086.66773
[2026-02-11 18:24:42] 2026-02-11 23:24:06,791 | INFO     | chi2: 0.1621792381437798
[2026-02-11 18:24:42] 2026-02-11 23:24:06,791 | INFO     | current memory leak: -29.42 B/s (using 154 data points, chi2=0.16)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,792 | INFO     | could have reported an average CPU frequency of 2400 MHz (10 samples)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,792 | INFO     | ..............................
[2026-02-11 18:24:42] 2026-02-11 23:24:06,792 | INFO     | . Timing measurements:
[2026-02-11 18:24:42] 2026-02-11 23:24:06,792 | INFO     | . get job = 0 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,792 | INFO     | . initial setup = 6 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,792 | INFO     | . payload setup = 5 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,793 | INFO     | . stage-in = 0 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,793 | INFO     | . payload execution = 10951 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,793 | INFO     | . stage-out = 2 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,793 | INFO     | . log creation = 0 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,793 | INFO     | ..............................
[2026-02-11 18:24:42] 2026-02-11 23:24:06,946 | INFO     | 
[2026-02-11 18:24:42] 2026-02-11 23:24:06,946 | INFO     | job summary report
[2026-02-11 18:24:42] 2026-02-11 23:24:06,947 | INFO     | --------------------------------------------------
[2026-02-11 18:24:42] 2026-02-11 23:24:06,947 | INFO     | PanDA job id: 7008682341
[2026-02-11 18:24:42] 2026-02-11 23:24:06,947 | INFO     | task id: 48442098
[2026-02-11 18:24:42] 2026-02-11 23:24:06,947 | INFO     | errors: (none)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,947 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 18:24:42] 2026-02-11 23:24:06,947 | INFO     | pilot state: finished 
[2026-02-11 18:24:42] 2026-02-11 23:24:06,948 | INFO     | transexitcode: 0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,948 | INFO     | exeerrorcode: 0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,948 | INFO     | exeerrordiag: 
[2026-02-11 18:24:42] 2026-02-11 23:24:06,948 | INFO     | exitcode: 0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,948 | INFO     | exitmsg: OK
[2026-02-11 18:24:42] 2026-02-11 23:24:06,948 | INFO     | cpuconsumptiontime: 82822 s
[2026-02-11 18:24:42] 2026-02-11 23:24:06,949 | INFO     | nevents: 400
[2026-02-11 18:24:42] 2026-02-11 23:24:06,949 | INFO     | neventsw: 0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,949 | INFO     | pid: 27467
[2026-02-11 18:24:42] 2026-02-11 23:24:06,949 | INFO     | pgrp: 27467
[2026-02-11 18:24:42] 2026-02-11 23:24:06,949 | INFO     | corecount: 8
[2026-02-11 18:24:42] 2026-02-11 23:24:06,949 | INFO     | event service: False
[2026-02-11 18:24:42] 2026-02-11 23:24:06,950 | INFO     | sizes: {0: 2282016, 1: 2282250, 10960: 2311456, 10962: 2320454, 10965: 2320510, 10967: 2320704}
[2026-02-11 18:24:42] 2026-02-11 23:24:06,950 | INFO     | --------------------------------------------------
[2026-02-11 18:24:42] 2026-02-11 23:24:06,950 | INFO     | 
[2026-02-11 18:24:42] 2026-02-11 23:24:06,950 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-11 18:24:42] 2026-02-11 23:24:06,967 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,968 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,968 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,968 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,970 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,971 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 18:24:42] 2026-02-11 23:24:06,971 | INFO     | job 7008682341 has completed (purged errors)
[2026-02-11 18:24:42] 2026-02-11 23:24:06,971 | INFO     | overall cleanup function is called
[2026-02-11 18:24:42] 2026-02-11 23:24:07,980 | INFO     | --- collectZombieJob: --- 10, [27467]
[2026-02-11 18:24:42] 2026-02-11 23:24:07,980 | INFO     | zombie collector waiting for pid 27467
[2026-02-11 18:24:42] 2026-02-11 23:24:07,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 18:24:42] 2026-02-11 23:24:07,980 | INFO     | collected zombie processes
[2026-02-11 18:24:42] 2026-02-11 23:24:07,980 | INFO     | will attempt to kill all subprocesses of pid=27467
[2026-02-11 18:24:42] 2026-02-11 23:24:08,152 | INFO     | process IDs to be killed: [27467] (in reverse order)
[2026-02-11 18:24:42] 2026-02-11 23:24:08,198 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 18:24:42] 2026-02-11 23:24:08,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 18:24:42] 2026-02-11 23:24:08,201 | INFO     | did not find any defunct processes belonging to 27467
[2026-02-11 18:24:42] 2026-02-11 23:24:08,204 | INFO     | did not find any defunct processes belonging to 27467
[2026-02-11 18:24:42] 2026-02-11 23:24:08,204 | INFO     | ready for new job
[2026-02-11 18:24:42] 2026-02-11 23:24:08,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 18:24:42] 2026-02-11 23:24:08,205 | INFO     | **************************************
[2026-02-11 18:24:42] 2026-02-11 23:24:08,205 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 18:24:42] 2026-02-11 23:24:08,205 | INFO     | **************************************
[2026-02-11 18:24:42] 2026-02-11 23:24:08,206 | INFO     | 
[2026-02-11 18:24:42] 2026-02-11 23:24:08,206 | INFO     | architecture information:
[2026-02-11 18:24:42] 2026-02-11 23:24:08,207 | INFO     | executing command: cat /etc/os-release
[2026-02-11 18:24:42] 2026-02-11 23:24:08,220 | INFO     | cat /etc/os-release:
[2026-02-11 18:24:42] NAME="CentOS Linux"
[2026-02-11 18:24:42] VERSION="7 (Core)"
[2026-02-11 18:24:42] ID="centos"
[2026-02-11 18:24:42] ID_LIKE="rhel fedora"
[2026-02-11 18:24:42] VERSION_ID="7"
[2026-02-11 18:24:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 18:24:42] ANSI_COLOR="0;31"
[2026-02-11 18:24:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 18:24:42] HOME_URL="https://www.centos.org/"
[2026-02-11 18:24:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 18:24:42] 
[2026-02-11 18:24:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 18:24:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 18:24:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 18:24:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 18:24:42] 
[2026-02-11 18:24:42] 2026-02-11 23:24:08,220 | INFO     | **************************************
[2026-02-11 18:24:42] 2026-02-11 23:24:08,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-11 18:24:42] 2026-02-11 23:24:08,742 | INFO     | sufficient remaining disk space (25511854080 B)
[2026-02-11 18:24:42] 2026-02-11 23:24:08,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 18:24:42] 2026-02-11 23:24:08,743 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 18:24:42] 2026-02-11 23:24:08,743 | INFO     | update_server=False
[2026-02-11 18:24:42] 2026-02-11 23:24:08,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 18:24:42] 2026-02-11 23:24:08,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 18:24:42] 2026-02-11 23:24:08,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 18:24:42] 2026-02-11 23:24:08,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 18:24:42] 2026-02-11 23:24:08,744 | INFO     | aborting loop
[2026-02-11 18:24:42] 2026-02-11 23:24:09,238 | INFO     | all data control threads have been joined
[2026-02-11 18:24:42] 2026-02-11 23:24:09,472 | INFO     | all job control threads have been joined
[2026-02-11 18:24:42] 2026-02-11 23:24:09,550 | INFO     | all payload control threads have been joined
[2026-02-11 18:24:42] 2026-02-11 23:24:09,748 | INFO     | [job] retrieve thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:09,750 | INFO     | [job] queue monitor thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:09,751 | INFO     | [job] job monitor thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:09,920 | INFO     | [job] validate thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,037 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,245 | INFO     | [data] control thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,341 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,477 | INFO     | [job] control thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,554 | INFO     | [payload] control thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 18:24:42] 2026-02-11 23:24:10,604 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,750 | INFO     | [data] copytool_out thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,751 | INFO     | [payload] validate_post thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:10,880 | INFO     | [data] copytool_in thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:11,032 | INFO     | [payload] failed_post thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:14,568 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 18:24:42] 2026-02-11 23:24:35,915 | INFO     | [monitor] cgroup control has ended
[2026-02-11 18:24:42] 2026-02-11 23:24:37,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400106125120)>', '<ExcThread(monitor, started 140399519721216)>']
[2026-02-11 18:24:42] 2026-02-11 23:24:38,978 | INFO     | PID=23076 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-11 18:24:42] 2026-02-11 23:24:38,978 | INFO     | .. there are 3 such processes running
[2026-02-11 18:24:42] 2026-02-11 23:24:38,979 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 18:24:42] 2026-02-11 23:24:38,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 18:24:42] 2026-02-11 23:24:38,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 18:24:42] 2026-02-11 23:24:38,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 18:24:42] 2026-02-11 23:24:38,979 | INFO     | [monitor] control thread has ended
[2026-02-11 18:24:42] 2026-02-11 23:24:42,669 | INFO     | all workflow threads have been joined
[2026-02-11 18:24:42] 2026-02-11 23:24:42,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 18:24:42] 2026-02-11 23:24:42,669 | INFO     | traces error code: 0
[2026-02-11 18:24:42] 2026-02-11 23:24:42,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 18:24:42] 2026-02-11 23:24:42,786 [wrapper] ==== pilot stdout END ====
[2026-02-11 18:24:42] 2026-02-11 23:24:42,788 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 18:24:42] 2026-02-11 23:24:42,790 [wrapper] pilotpid: 23076
[2026-02-11 18:24:42] 2026-02-11 23:24:42,792 [wrapper] Pilot exit status: 0
[2026-02-11 18:24:42] 2026-02-11 23:24:42,801 [wrapper] pandaids: 7008682341
[2026-02-11 18:24:42] 2026-02-11 23:24:42,832 [wrapper] cleanup supervisor_pilot 20846 23077
[2026-02-11 18:24:42] 2026-02-11 23:24:42,834 [wrapper] Test setup, not cleaning
[2026-02-11 18:24:42] 2026-02-11 23:24:42,837 [wrapper] apfmon messages muted
[2026-02-11 18:24:42] 2026-02-11 23:24:42,839 [wrapper] ==== wrapper stdout END ====
[2026-02-11 18:24:42] 2026-02-11 23:24:42,841 [wrapper] ==== wrapper stderr END ====
[2026-02-11 18:24:42]  *** Error codes and diagnostics ***
[2026-02-11 18:24:42]     "exeErrorCode": 0,
[2026-02-11 18:24:42]     "exeErrorDiag": "",
[2026-02-11 18:24:42]     "pilotErrorCode": 0,
[2026-02-11 18:24:42]     "pilotErrorDiag": "",
[2026-02-11 18:24:42]  *** Listing of results directory ***
[2026-02-11 18:24:42] total 665956
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas    584627 Feb 11 08:18 pilot3.tar.gz
[2026-02-11 18:24:42] -rwx------ 1 boincer umatlas     36322 Feb 11 08:22 runpilot2-wrapper.sh
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas      5111 Feb 11 08:24 queuedata.json
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas       100 Feb 11 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 18:24:42] -rwxr-xr-x 1 boincer umatlas      7986 Feb 11 15:20 run_atlas
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas       105 Feb 11 15:20 job.xml
[2026-02-11 18:24:42] -rw-r--r-- 2 boincer umatlas 489751519 Feb 11 15:21 EVNT.48442096._000114.pool.root.1
[2026-02-11 18:24:42] -rw-r--r-- 2 boincer umatlas     15845 Feb 11 15:21 start_atlas.sh
[2026-02-11 18:24:42] drwxrwx--x 2 boincer umatlas      4096 Feb 11 15:21 shared
[2026-02-11 18:24:42] -rw-r--r-- 2 boincer umatlas    597962 Feb 11 15:21 input.tar.gz
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas         0 Feb 11 15:21 boinc_lockfile
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas      2528 Feb 11 15:21 pandaJob.out
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas        57 Feb 11 15:21 setup.sh.local
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas   1005065 Feb 11 15:21 agis_schedconf.cvmfs.json
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas       445 Feb 11 15:21 workernode_map.json
[2026-02-11 18:24:42] drwx------ 5 boincer umatlas      4096 Feb 11 15:21 pilot3
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas      5951 Feb 11 18:20 init_data.xml
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas 184317012 Feb 11 18:23 HITS.48442098._006484.pool.root.1
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas       531 Feb 11 18:23 boinc_task_state.xml
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas      1063 Feb 11 18:23 memory_monitor_summary.json
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas   1512955 Feb 11 18:24 agis_ddmendpoints.agis.ALL.json
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas    413927 Feb 11 18:24 log.48442098._006484.job.log.tgz.1
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas        95 Feb 11 18:24 pilot_heartbeat.json
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas      6427 Feb 11 18:24 heartbeat.json
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas      8192 Feb 11 18:24 boinc_mmap_file
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas        28 Feb 11 18:24 wrapper_checkpoint.txt
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas      4817 Feb 11 18:24 pilotlog.txt
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas   1548417 Feb 11 18:24 log.48442098._006484.job.log.1
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas       357 Feb 11 18:24 output.list
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas       620 Feb 11 18:24 runtime_log
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas   1976320 Feb 11 18:24 result.tar.gz
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas      9342 Feb 11 18:24 runtime_log.err
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas       661 Feb 11 18:24 84XMDmvLPA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVYjKDmpIY0wn.diag
[2026-02-11 18:24:42] -rw-r--r-- 1 boincer umatlas     21325 Feb 11 18:24 stderr.txt
[2026-02-11 18:24:42] HITS file was successfully produced:
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas 184317012 Feb 11 18:23 shared/HITS.pool.root.1
[2026-02-11 18:24:42]  *** Contents of shared directory: ***
[2026-02-11 18:24:42] total 660816
[2026-02-11 18:24:42] -rw-r--r-- 2 boincer umatlas 489751519 Feb 11 15:21 ATLAS.root_0
[2026-02-11 18:24:42] -rw-r--r-- 2 boincer umatlas     15845 Feb 11 15:21 start_atlas.sh
[2026-02-11 18:24:42] -rw-r--r-- 2 boincer umatlas    597962 Feb 11 15:21 input.tar.gz
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas 184317012 Feb 11 18:23 HITS.pool.root.1
[2026-02-11 18:24:42] -rw------- 1 boincer umatlas   1976320 Feb 11 18:24 result.tar.gz
18:24:44 (19056): run_atlas exited; CPU time 82950.114378
18:24:44 (19056): called boinc_finish(0)

</stderr_txt>
]]>

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