Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:15:53 (534444): wrapper (7.7.26015): starting
21:15:53 (534444): wrapper: running run_atlas (--nthreads 12)
[2026-02-11 21:15:53] Arguments: --nthreads 12
[2026-02-11 21:15:53] Threads: 12
[2026-02-11 21:15:53] Checking for CVMFS
[2026-02-11 21:15:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 21:15:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 21:15:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 21:15:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 21:15:54] 2.11.0.0 3368800 2663 106748 156129 1 188 6076804 6144000 11912 130560 0 24407960 99.997 83167 333 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-11 21:15:54] CVMFS is ok
[2026-02-11 21:15:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 21:15:54] Checking for apptainer binary...
[2026-02-11 21:15:54] apptainer is not installed, using version from CVMFS
[2026-02-11 21:15:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 21:15:54] radiat0r
[2026-02-11 21:15:54] apptainer works
[2026-02-11 21:15:54] Set ATHENA_PROC_NUMBER=12
[2026-02-11 21:15:54] Set ATHENA_CORE_NUMBER=12
[2026-02-11 21:15:54] Starting ATLAS job with PandaID=7011765301
[2026-02-11 21:15:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 22:34:28]  *** The last 200 lines of the pilot log: ***
[2026-02-11 22:34:28]  is_tar=False
[2026-02-11 22:34:28]  lfn=log.48431096._029774.job.log.tgz.1
[2026-02-11 22:34:28]  mtime=0
[2026-02-11 22:34:28]  protocol_id=None
[2026-02-11 22:34:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 22:34:28]  replicas=None
[2026-02-11 22:34:28]  scope=mc23_13p6TeV
[2026-02-11 22:34:28]  status=None
[2026-02-11 22:34:28]  status_code=0
[2026-02-11 22:34:28]  storage_token=
[2026-02-11 22:34:28]  surl=/var/lib/boinc/slots/15/PanDA_Pilot-7011765301/log.48431096._029774.job.log.tgz.1
[2026-02-11 22:34:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/66/log.48431096._029774.job.log.tgz.1
[2026-02-11 22:34:28]  workdir=None
[2026-02-11 22:34:28] ]
[2026-02-11 22:34:28] 2026-02-11 22:33:22,406 | INFO     | transferring file log.48431096._029774.job.log.tgz.1 from /var/lib/boinc/slots/15/PanDA_Pilot-7011765301/log.48431096._029774.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-11 22:34:28] 2026-02-11 22:33:22,407 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/15/PanDA_Pilot-7011765301/log.48431096._029774.job.log.tgz.1 /var/lib/boinc/slots/15/log.48431096._029774.j
[2026-02-11 22:34:28] 2026-02-11 22:33:22,431 | INFO     | adding to output.list: log.48431096._029774.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/66/log.48431096._029774.job.log.tg
[2026-02-11 22:34:28] 2026-02-11 22:33:22,435 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 22:34:28] 2026-02-11 22:33:22,435 | INFO     | summary of transferred files:
[2026-02-11 22:34:28] 2026-02-11 22:33:22,435 | INFO     |  -- lfn=log.48431096._029774.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 22:34:28] 2026-02-11 22:33:22,435 | INFO     | stage-out finished correctly
[2026-02-11 22:34:28] 2026-02-11 22:33:22,526 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 22:34:28] 2026-02-11 22:33:22,991 | INFO     | time since job start (4628s) is within the limit (349056.0s)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,278 | WARNING  | process 544750 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 22:34:28] 2026-02-11 22:33:23,278 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-7011765301/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,585 | INFO     | job 7011765301 has state=finished
[2026-02-11 22:34:28] 2026-02-11 22:33:23,586 | INFO     | preparing for final server update for job 7011765301 in state='finished'
[2026-02-11 22:34:28] 2026-02-11 22:33:23,586 | INFO     | reading metadata from: /var/lib/boinc/slots/15/PanDA_Pilot-7011765301/jobReport.json
[2026-02-11 22:34:28] 2026-02-11 22:33:23,591 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/15/workernode_map.json
[2026-02-11 22:34:28] 2026-02-11 22:33:23,592 | INFO     | this job has now completed (state=finished)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,592 | INFO     | log transfer has been attempted: DONE
[2026-02-11 22:34:28] 2026-02-11 22:33:23,592 | INFO     | job 7011765301 has finished - writing final server update
[2026-02-11 22:34:28] 2026-02-11 22:33:23,593 | INFO     | total number of processed events: 400 (read)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,697 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-7011765301/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,698 | INFO     | extracted standard info from prmon json
[2026-02-11 22:34:28] 2026-02-11 22:33:23,698 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 22:34:28] 2026-02-11 22:33:23,698 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 22:34:28] 2026-02-11 22:33:23,699 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 22:34:28] 2026-02-11 22:33:23,699 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 22:34:28] 2026-02-11 22:33:23,701 | INFO     | fitting pss+swap vs Time
[2026-02-11 22:34:28] 2026-02-11 22:33:23,701 | INFO     | sum of square deviations: 101843770.0
[2026-02-11 22:34:28] 2026-02-11 22:33:23,701 | INFO     | sum of deviations: -1386943519.0000002
[2026-02-11 22:34:28] 2026-02-11 22:33:23,702 | INFO     | mean x: 1770846980.0
[2026-02-11 22:34:28] 2026-02-11 22:33:23,702 | INFO     | mean y: 2788280.4057971016
[2026-02-11 22:34:28] 2026-02-11 22:33:23,702 | INFO     | intersect: 24118792058.071556
[2026-02-11 22:34:28] 2026-02-11 22:33:23,702 | INFO     | chi2: 0.04933060155654223
[2026-02-11 22:34:28] 2026-02-11 22:33:23,702 | INFO     | current memory leak: -13.62 B/s (using 69 data points, chi2=0.05)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,703 | INFO     | could have reported an average CPU frequency of 2356 MHz (6 samples)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,703 | INFO     | ..............................
[2026-02-11 22:34:28] 2026-02-11 22:33:23,703 | INFO     | . Timing measurements:
[2026-02-11 22:34:28] 2026-02-11 22:33:23,703 | INFO     | . get job = 0 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,703 | INFO     | . initial setup = 7 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,703 | INFO     | . payload setup = 8 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,704 | INFO     | . stage-in = 0 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,704 | INFO     | . payload execution = 4602 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,704 | INFO     | . stage-out = 0 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,704 | INFO     | . log creation = 0 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,704 | INFO     | ..............................
[2026-02-11 22:34:28] 2026-02-11 22:33:23,798 | INFO     | 
[2026-02-11 22:34:28] 2026-02-11 22:33:23,799 | INFO     | job summary report
[2026-02-11 22:34:28] 2026-02-11 22:33:23,799 | INFO     | --------------------------------------------------
[2026-02-11 22:34:28] 2026-02-11 22:33:23,799 | INFO     | PanDA job id: 7011765301
[2026-02-11 22:34:28] 2026-02-11 22:33:23,799 | INFO     | task id: 48431096
[2026-02-11 22:34:28] 2026-02-11 22:33:23,799 | INFO     | errors: (none)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | pilot state: finished 
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | transexitcode: 0
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | exeerrorcode: 0
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | exeerrordiag: 
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | exitcode: 0
[2026-02-11 22:34:28] 2026-02-11 22:33:23,800 | INFO     | exitmsg: OK
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | cpuconsumptiontime: 49413 s
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | nevents: 400
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | neventsw: 0
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | pid: 544750
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | pgrp: 544750
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | corecount: 12
[2026-02-11 22:34:28] 2026-02-11 22:33:23,801 | INFO     | event service: False
[2026-02-11 22:34:28] 2026-02-11 22:33:23,802 | INFO     | sizes: {0: 2281954, 1: 2282216, 11: 2282244, 4615: 2308671, 4616: 2317727, 4617: 2317865}
[2026-02-11 22:34:28] 2026-02-11 22:33:23,802 | INFO     | --------------------------------------------------
[2026-02-11 22:34:28] 2026-02-11 22:33:23,802 | INFO     | 
[2026-02-11 22:34:28] 2026-02-11 22:33:23,802 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-02-11 22:34:28] 2026-02-11 22:33:23,831 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | job 7011765301 has completed (purged errors)
[2026-02-11 22:34:28] 2026-02-11 22:33:23,833 | INFO     | overall cleanup function is called
[2026-02-11 22:34:28] 2026-02-11 22:33:24,594 | INFO     | number of running child processes to parent process 544750: 1
[2026-02-11 22:34:28] 2026-02-11 22:33:24,594 | INFO     | maximum number of monitored processes: 6
[2026-02-11 22:34:28] 2026-02-11 22:33:24,594 | INFO     | aborting job monitoring since job object (job id=7011765301) has expired
[2026-02-11 22:34:28] 2026-02-11 22:33:24,843 | INFO     | --- collectZombieJob: --- 10, [544750]
[2026-02-11 22:34:28] 2026-02-11 22:33:24,848 | INFO     | zombie collector waiting for pid 544750
[2026-02-11 22:34:28] 2026-02-11 22:33:24,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 22:34:28] 2026-02-11 22:33:24,851 | INFO     | collected zombie processes
[2026-02-11 22:34:28] 2026-02-11 22:33:24,851 | INFO     | will attempt to kill all subprocesses of pid=544750
[2026-02-11 22:34:28] 2026-02-11 22:33:25,201 | INFO     | PID=539178 has CPU usage=26.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-11 22:34:28] 2026-02-11 22:33:25,201 | INFO     | .. there are 15 such processes running
[2026-02-11 22:34:28] 2026-02-11 22:33:25,612 | INFO     | process IDs to be killed: [544750] (in reverse order)
[2026-02-11 22:34:28] 2026-02-11 22:33:25,846 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 22:34:28] 2026-02-11 22:33:25,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 22:34:28] 2026-02-11 22:33:25,875 | INFO     | did not find any defunct processes belonging to 544750
[2026-02-11 22:34:28] 2026-02-11 22:33:25,896 | INFO     | did not find any defunct processes belonging to 544750
[2026-02-11 22:34:28] 2026-02-11 22:33:25,896 | INFO     | ready for new job
[2026-02-11 22:34:28] 2026-02-11 22:33:25,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 22:34:28] 2026-02-11 22:33:25,898 | INFO     | **************************************
[2026-02-11 22:34:28] 2026-02-11 22:33:25,898 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 22:34:28] 2026-02-11 22:33:25,898 | INFO     | **************************************
[2026-02-11 22:34:28] 2026-02-11 22:33:25,898 | INFO     | 
[2026-02-11 22:34:28] 2026-02-11 22:33:25,934 | INFO     | architecture information:
[2026-02-11 22:34:28] 2026-02-11 22:33:25,935 | INFO     | executing command: cat /etc/os-release
[2026-02-11 22:34:28] 2026-02-11 22:33:25,959 | INFO     | cat /etc/os-release:
[2026-02-11 22:34:28] NAME="CentOS Linux"
[2026-02-11 22:34:28] VERSION="7 (Core)"
[2026-02-11 22:34:28] ID="centos"
[2026-02-11 22:34:28] ID_LIKE="rhel fedora"
[2026-02-11 22:34:28] VERSION_ID="7"
[2026-02-11 22:34:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 22:34:28] ANSI_COLOR="0;31"
[2026-02-11 22:34:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 22:34:28] HOME_URL="https://www.centos.org/"
[2026-02-11 22:34:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 22:34:28] 
[2026-02-11 22:34:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 22:34:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 22:34:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 22:34:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 22:34:28] 
[2026-02-11 22:34:28] 2026-02-11 22:33:25,960 | INFO     | **************************************
[2026-02-11 22:34:28] 2026-02-11 22:33:26,463 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-02-11 22:34:28] 2026-02-11 22:33:26,488 | INFO     | sufficient remaining disk space (1689523322880 B)
[2026-02-11 22:34:28] 2026-02-11 22:33:26,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 22:34:28] 2026-02-11 22:33:26,489 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 22:34:28] 2026-02-11 22:33:26,489 | INFO     | update_server=False
[2026-02-11 22:34:28] 2026-02-11 22:33:26,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 22:34:28] 2026-02-11 22:33:26,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 22:34:28] 2026-02-11 22:33:26,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 22:34:28] 2026-02-11 22:33:26,490 | INFO     | aborting loop
[2026-02-11 22:34:28] 2026-02-11 22:33:26,868 | INFO     | all job control threads have been joined
[2026-02-11 22:34:28] 2026-02-11 22:33:26,868 | INFO     | all data control threads have been joined
[2026-02-11 22:34:28] 2026-02-11 22:33:27,463 | INFO     | all payload control threads have been joined
[2026-02-11 22:34:28] 2026-02-11 22:33:27,492 | INFO     | [job] job monitor thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:27,495 | INFO     | [job] retrieve thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:27,509 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:27,692 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:27,874 | INFO     | [job] control thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:27,874 | INFO     | [data] control thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:27,981 | INFO     | [data] copytool_in thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:28,055 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:28,468 | INFO     | [payload] control thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:28,478 | INFO     | [payload] failed_post thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:28,492 | INFO     | [data] copytool_out thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:28,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 22:34:28] 2026-02-11 22:33:28,726 | INFO     | [job] validate thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:28,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 22:34:28] 2026-02-11 22:33:28,908 | INFO     | [payload] validate_post thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:29,813 | INFO     | [job] queue monitor thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:32,640 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:36,934 | INFO     | job.realtimelogging is not enabled
[2026-02-11 22:34:28] 2026-02-11 22:33:37,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 22:34:28] 2026-02-11 22:33:58,234 | INFO     | PID=539178 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 22:34:28] 2026-02-11 22:33:58,234 | INFO     | .. there are 15 such processes running
[2026-02-11 22:34:28] 2026-02-11 22:33:58,234 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 22:34:28] 2026-02-11 22:33:58,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 22:34:28] 2026-02-11 22:33:58,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 22:34:28] 2026-02-11 22:34:21,648 | INFO     | [monitor] cgroup control has ended
[2026-02-11 22:34:28] 2026-02-11 22:34:22,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477833480000)>', '<ExcThread(monitor, started 140477533759232)>']
[2026-02-11 22:34:28] 2026-02-11 22:34:23,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 22:34:28] 2026-02-11 22:34:23,356 | INFO     | [monitor] control thread has ended
[2026-02-11 22:34:28] 2026-02-11 22:34:27,576 | INFO     | all workflow threads have been joined
[2026-02-11 22:34:28] 2026-02-11 22:34:27,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 22:34:28] 2026-02-11 22:34:27,576 | INFO     | traces error code: 0
[2026-02-11 22:34:28] 2026-02-11 22:34:27,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 22:34:28] 2026-02-11 22:34:27,729 [wrapper] ==== pilot stdout END ====
[2026-02-11 22:34:28] 2026-02-11 22:34:27,733 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 22:34:28] 2026-02-11 22:34:27,737 [wrapper] pilotpid: 539178
[2026-02-11 22:34:28] 2026-02-11 22:34:27,741 [wrapper] Pilot exit status: 0
[2026-02-11 22:34:28] 2026-02-11 22:34:27,754 [wrapper] pandaids: 7011765301
[2026-02-11 22:34:28] 2026-02-11 22:34:27,934 [wrapper] cleanup supervisor_pilot  808577 539179
[2026-02-11 22:34:28] 2026-02-11 22:34:27,938 [wrapper] Test setup, not cleaning
[2026-02-11 22:34:28] 2026-02-11 22:34:27,941 [wrapper] apfmon messages muted
[2026-02-11 22:34:28] 2026-02-11 22:34:27,945 [wrapper] ==== wrapper stdout END ====
[2026-02-11 22:34:28] 2026-02-11 22:34:27,949 [wrapper] ==== wrapper stderr END ====
[2026-02-11 22:34:28]  *** Error codes and diagnostics ***
[2026-02-11 22:34:28]     "exeErrorCode": 0,
[2026-02-11 22:34:28]     "exeErrorDiag": "",
[2026-02-11 22:34:28]     "pilotErrorCode": 0,
[2026-02-11 22:34:28]     "pilotErrorDiag": "",
[2026-02-11 22:34:28]  *** Listing of results directory ***
[2026-02-11 22:34:28] total 949232
[2026-02-11 22:34:28] -rwx------ 1 boinc boinc     36322 Feb 11 07:49 runpilot2-wrapper.sh
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc    584627 Feb 11 07:52 pilot3.tar.gz
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc      5111 Feb 11 07:52 queuedata.json
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc       100 Feb 11 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 22:34:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 21:15 run_atlas
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc       105 Feb 11 21:15 job.xml
[2026-02-11 22:34:28] -rw-r--r-- 2 boinc boinc     15845 Feb 11 21:15 start_atlas.sh
[2026-02-11 22:34:28] drwxrwx--x 2 boinc boinc      4096 Feb 11 21:15 shared
[2026-02-11 22:34:28] -rw-r--r-- 2 boinc boinc    597965 Feb 11 21:15 input.tar.gz
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc      9417 Feb 11 21:15 init_data.xml
[2026-02-11 22:34:28] -rw-r--r-- 2 boinc boinc 678144332 Feb 11 21:15 EVNT.48431094._000680.pool.root.1
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc         0 Feb 11 21:15 boinc_setup_complete
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc         0 Feb 11 21:15 boinc_lockfile
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc      2556 Feb 11 21:15 pandaJob.out
[2026-02-11 22:34:28] -rw------- 1 boinc boinc   1005065 Feb 11 21:16 agis_schedconf.cvmfs.json
[2026-02-11 22:34:28] -rw------- 1 boinc boinc   1512955 Feb 11 21:16 agis_ddmendpoints.agis.ALL.json
[2026-02-11 22:34:28] -rw------- 1 boinc boinc       421 Feb 11 21:16 workernode_map.json
[2026-02-11 22:34:28] drwx------ 5 boinc boinc      4096 Feb 11 21:16 pilot3
[2026-02-11 22:34:28] -rw------- 1 boinc boinc 287812117 Feb 11 22:32 HITS.48431096._029774.pool.root.1
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc       530 Feb 11 22:32 boinc_task_state.xml
[2026-02-11 22:34:28] -rw------- 1 boinc boinc      1030 Feb 11 22:33 memory_monitor_summary.json
[2026-02-11 22:34:28] -rw------- 1 boinc boinc        95 Feb 11 22:33 pilot_heartbeat.json
[2026-02-11 22:34:28] -rw------- 1 boinc boinc    394502 Feb 11 22:33 log.48431096._029774.job.log.tgz.1
[2026-02-11 22:34:28] -rw------- 1 boinc boinc      6295 Feb 11 22:33 heartbeat.json
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc        27 Feb 11 22:34 wrapper_checkpoint.txt
[2026-02-11 22:34:28] -rw------- 1 boinc boinc      4894 Feb 11 22:34 pilotlog.txt
[2026-02-11 22:34:28] -rw------- 1 boinc boinc    662745 Feb 11 22:34 log.48431096._029774.job.log.1
[2026-02-11 22:34:28] -rw------- 1 boinc boinc       357 Feb 11 22:34 output.list
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc      8192 Feb 11 22:34 boinc_mmap_file
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc       620 Feb 11 22:34 runtime_log
[2026-02-11 22:34:28] -rw------- 1 boinc boinc   1075200 Feb 11 22:34 result.tar.gz
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc      8787 Feb 11 22:34 runtime_log.err
[2026-02-11 22:34:28] -rw------- 1 boinc boinc       643 Feb 11 22:34 MU4NDmm9JA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmH8iKDm9Rzh7m.diag
[2026-02-11 22:34:28] -rw-r--r-- 1 boinc boinc     21351 Feb 11 22:34 stderr.txt
[2026-02-11 22:34:28] HITS file was successfully produced:
[2026-02-11 22:34:28] -rw------- 1 boinc boinc 287812117 Feb 11 22:32 shared/HITS.pool.root.1
[2026-02-11 22:34:28]  *** Contents of shared directory: ***
[2026-02-11 22:34:28] total 944980
[2026-02-11 22:34:28] -rw-r--r-- 2 boinc boinc     15845 Feb 11 21:15 start_atlas.sh
[2026-02-11 22:34:28] -rw-r--r-- 2 boinc boinc    597965 Feb 11 21:15 input.tar.gz
[2026-02-11 22:34:28] -rw-r--r-- 2 boinc boinc 678144332 Feb 11 21:15 ATLAS.root_0
[2026-02-11 22:34:28] -rw------- 1 boinc boinc 287812117 Feb 11 22:32 HITS.pool.root.1
[2026-02-11 22:34:28] -rw------- 1 boinc boinc   1075200 Feb 11 22:34 result.tar.gz
22:34:29 (534444): run_atlas exited; CPU time 49702.283689
22:34:29 (534444): called boinc_finish(0)

</stderr_txt>
]]>

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