Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:58:40 (2716346): wrapper (7.7.26015): starting
07:58:40 (2716346): wrapper: running run_atlas (--nthreads 3)
[2026-02-12 07:58:40] Arguments: --nthreads 3
[2026-02-12 07:58:40] Threads: 3
[2026-02-12 07:58:40] Checking for CVMFS
[2026-02-12 07:58:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 07:58:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 07:58:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 07:58:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 07:58:41] 2.9.2.0 1597432 8597 70508 156142 1 50 24444719 36864001 0 130560 0 3188248 99.982 287213 3817 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-12 07:58:41] CVMFS is ok
[2026-02-12 07:58:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-12 07:58:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-12 07:58:41] Further information can be found at the LHC@home message board.
[2026-02-12 07:58:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 07:58:41] Checking for apptainer binary...
[2026-02-12 07:58:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 07:58:41] Running /usr/bin/apptainer --version
[2026-02-12 07:58:41] apptainer version 1.4.2-2.1
[2026-02-12 07:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 07:58:41] cosA133a
[2026-02-12 07:58:41] apptainer works
[2026-02-12 07:58:41] Set ATHENA_PROC_NUMBER=3
[2026-02-12 07:58:41] Set ATHENA_CORE_NUMBER=3
[2026-02-12 07:58:41] Starting ATLAS job with PandaID=7008679099
[2026-02-12 07:58:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 09:27:10]  *** The last 200 lines of the pilot log: ***
[2026-02-12 09:27:10]  direct_access_wan=False
[2026-02-12 09:27:10]  domain=
[2026-02-12 09:27:10]  filesize=293344
[2026-02-12 09:27:10]  filetype=log
[2026-02-12 09:27:10]  guid=5fc54a90-bd80-4fc3-a492-0bf8eb125b44
[2026-02-12 09:27:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 09:27:10]  is_altstaged=None
[2026-02-12 09:27:10]  is_tar=False
[2026-02-12 09:27:10]  lfn=log.48442031._010035.job.log.tgz.1
[2026-02-12 09:27:10]  mtime=0
[2026-02-12 09:27:10]  protocol_id=None
[2026-02-12 09:27:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 09:27:10]  replicas=None
[2026-02-12 09:27:10]  scope=mc23_13p6TeV
[2026-02-12 09:27:10]  status=None
[2026-02-12 09:27:10]  status_code=0
[2026-02-12 09:27:10]  storage_token=
[2026-02-12 09:27:10]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7008679099/log.48442031._010035.job.log.tgz.1
[2026-02-12 09:27:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/dc/log.48442031._010035.job.log.tgz.1
[2026-02-12 09:27:10]  workdir=None
[2026-02-12 09:27:10] ]
[2026-02-12 09:27:10] 2026-02-12 08:26:15,649 | INFO     | transferring file log.48442031._010035.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7008679099/log.48442031._010035.job.log.tgz.1 to /local/data/boinc/
[2026-02-12 09:27:10] 2026-02-12 08:26:15,649 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7008679099/log.48442031._010035.job.log.tgz.1 /local/data/boinc/slots/0/log.48442031._0100
[2026-02-12 09:27:10] 2026-02-12 08:26:15,661 | INFO     | adding to output.list: log.48442031._010035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/dc/log.48442031._010035.job.log.tg
[2026-02-12 09:27:10] 2026-02-12 08:26:15,662 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 09:27:10] 2026-02-12 08:26:15,662 | INFO     | summary of transferred files:
[2026-02-12 09:27:10] 2026-02-12 08:26:15,662 | INFO     |  -- lfn=log.48442031._010035.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 09:27:10] 2026-02-12 08:26:15,662 | INFO     | stage-out finished correctly
[2026-02-12 09:27:10] 2026-02-12 08:26:15,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 09:27:10] 2026-02-12 08:26:16,370 | INFO     | time since job start (5240s) is within the limit (349056.0s)
[2026-02-12 09:27:10] 2026-02-12 08:26:16,593 | INFO     | monitor loop #405: job 0:7008679099 is in state 'finished'
[2026-02-12 09:27:10] 2026-02-12 08:26:16,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,577 | INFO     | job 7008679099 has state=finished
[2026-02-12 09:27:10] 2026-02-12 08:26:17,577 | INFO     | preparing for final server update for job 7008679099 in state='finished'
[2026-02-12 09:27:10] 2026-02-12 08:26:17,578 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7008679099/jobReport.json
[2026-02-12 09:27:10] 2026-02-12 08:26:17,582 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-12 09:27:10] 2026-02-12 08:26:17,582 | INFO     | this job has now completed (state=finished)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,582 | INFO     | log transfer has been attempted: DONE
[2026-02-12 09:27:10] 2026-02-12 08:26:17,582 | INFO     | job 7008679099 has finished - writing final server update
[2026-02-12 09:27:10] 2026-02-12 08:26:17,582 | INFO     | total number of processed events: 400 (read)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,583 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7008679099/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,583 | INFO     | extracted standard info from prmon json
[2026-02-12 09:27:10] 2026-02-12 08:26:17,583 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 09:27:10] 2026-02-12 08:26:17,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 09:27:10] 2026-02-12 08:26:17,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 09:27:10] 2026-02-12 08:26:17,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 09:27:10] 2026-02-12 08:26:17,584 | INFO     | fitting pss+swap vs Time
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | sum of square deviations: 152858680.0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | sum of deviations: -2283570136.0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | mean x: 1770882239.0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | mean y: 2367822.9493670887
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | intersect: 26457743437.557674
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | chi2: 0.08967052038772076
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | current memory leak: -14.94 B/s (using 79 data points, chi2=0.09)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | could have reported an average CPU frequency of 4079 MHz (6 samples)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | ..............................
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . Timing measurements:
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . get job = 0 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . initial setup = 6 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . payload setup = 5 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . stage-in = 0 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . payload execution = 5219 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . stage-out = 0 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | . log creation = 0 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,585 | INFO     | ..............................
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | 
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | job summary report
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | --------------------------------------------------
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | PanDA job id: 7008679099
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | task id: 48442031
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | errors: (none)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | pilot state: finished 
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | transexitcode: 0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | exeerrorcode: 0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | exeerrordiag: 
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | exitcode: 0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | exitmsg: OK
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | cpuconsumptiontime: 14906 s
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | nevents: 400
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | neventsw: 0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | pid: 2724820
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | pgrp: 2724820
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | corecount: 3
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | event service: False
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | sizes: {0: 2282177, 11: 2282177, 5227: 2308738, 5228: 2317798, 5230: 2317936}
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | --------------------------------------------------
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | 
[2026-02-12 09:27:10] 2026-02-12 08:26:17,614 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | job 7008679099 has completed (purged errors)
[2026-02-12 09:27:10] 2026-02-12 08:26:17,628 | INFO     | overall cleanup function is called
[2026-02-12 09:27:10] 2026-02-12 08:26:18,634 | INFO     | --- collectZombieJob: --- 10, [2724820]
[2026-02-12 09:27:10] 2026-02-12 08:26:18,635 | INFO     | zombie collector waiting for pid 2724820
[2026-02-12 09:27:10] 2026-02-12 08:26:18,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 09:27:10] 2026-02-12 08:26:18,635 | INFO     | collected zombie processes
[2026-02-12 09:27:10] 2026-02-12 08:26:18,636 | INFO     | will attempt to kill all subprocesses of pid=2724820
[2026-02-12 09:27:10] 2026-02-12 08:26:18,677 | INFO     | process IDs to be killed: [2724820] (in reverse order)
[2026-02-12 09:27:10] 2026-02-12 08:26:18,701 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 09:27:10] 2026-02-12 08:26:18,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 09:27:10] 2026-02-12 08:26:18,703 | INFO     | did not find any defunct processes belonging to 2724820
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | did not find any defunct processes belonging to 2724820
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | ready for new job
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | **************************************
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | **************************************
[2026-02-12 09:27:10] 2026-02-12 08:26:18,704 | INFO     | 
[2026-02-12 09:27:10] 2026-02-12 08:26:18,705 | INFO     | architecture information:
[2026-02-12 09:27:10] 2026-02-12 08:26:18,705 | INFO     | executing command: cat /etc/os-release
[2026-02-12 09:27:10] 2026-02-12 08:26:18,714 | INFO     | cat /etc/os-release:
[2026-02-12 09:27:10] NAME="CentOS Linux"
[2026-02-12 09:27:10] VERSION="7 (Core)"
[2026-02-12 09:27:10] ID="centos"
[2026-02-12 09:27:10] ID_LIKE="rhel fedora"
[2026-02-12 09:27:10] VERSION_ID="7"
[2026-02-12 09:27:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 09:27:10] ANSI_COLOR="0;31"
[2026-02-12 09:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 09:27:10] HOME_URL="https://www.centos.org/"
[2026-02-12 09:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 09:27:10] 
[2026-02-12 09:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 09:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 09:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 09:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 09:27:10] 
[2026-02-12 09:27:10] 2026-02-12 08:26:18,714 | INFO     | **************************************
[2026-02-12 09:27:10] 2026-02-12 08:26:19,217 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-12 09:27:10] 2026-02-12 08:26:19,230 | INFO     | sufficient remaining disk space (332497158144 B)
[2026-02-12 09:27:10] 2026-02-12 08:26:19,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 09:27:10] 2026-02-12 08:26:19,231 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 09:27:10] 2026-02-12 08:26:19,231 | INFO     | update_server=False
[2026-02-12 09:27:10] 2026-02-12 08:26:19,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 09:27:10] 2026-02-12 08:26:19,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 09:27:10] 2026-02-12 08:26:19,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 09:27:10] 2026-02-12 08:26:19,454 | INFO     | all data control threads have been joined
[2026-02-12 09:27:10] 2026-02-12 08:26:20,081 | INFO     | all payload control threads have been joined
[2026-02-12 09:27:10] 2026-02-12 08:26:20,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 09:27:10] 2026-02-12 08:26:20,108 | INFO     | aborting loop
[2026-02-12 09:27:10] 2026-02-12 08:26:20,237 | INFO     | [job] retrieve thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:20,237 | INFO     | [job] queue monitor thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:20,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:20,388 | INFO     | [payload] validate_post thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:20,460 | INFO     | [data] control thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:20,645 | INFO     | all job control threads have been joined
[2026-02-12 09:27:10] 2026-02-12 08:26:20,712 | INFO     | [payload] failed_post thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,086 | INFO     | [payload] control thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,114 | INFO     | [job] job monitor thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,237 | INFO     | [data] copytool_out thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,376 | INFO     | [job] validate thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,448 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,563 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,612 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,621 | INFO     | [data] copytool_in thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,651 | INFO     | [job] control thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:21,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 09:27:10] 2026-02-12 08:26:25,734 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 09:27:10] 2026-02-12 08:26:49,487 | INFO     | PID=2720391 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 09:27:10] 2026-02-12 08:26:49,487 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 09:27:10] 2026-02-12 08:26:49,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 09:27:10] 2026-02-12 08:26:49,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 09:27:10] 2026-02-12 08:27:03,784 | INFO     | [monitor] cgroup control has ended
[2026-02-12 09:27:10] 2026-02-12 08:27:05,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139948658300736)>', '<ExcThread(monitor, started 139947918997248)>']
[2026-02-12 09:27:10] 2026-02-12 08:27:05,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 09:27:10] 2026-02-12 08:27:05,573 | INFO     | [monitor] control thread has ended
[2026-02-12 09:27:10] 2026-02-12 08:27:10,544 | INFO     | all workflow threads have been joined
[2026-02-12 09:27:10] 2026-02-12 08:27:10,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 09:27:10] 2026-02-12 08:27:10,545 | INFO     | traces error code: 0
[2026-02-12 09:27:10] 2026-02-12 08:27:10,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 09:27:10] 2026-02-12 08:27:10,592 [wrapper] ==== pilot stdout END ====
[2026-02-12 09:27:10] 2026-02-12 08:27:10,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 09:27:10] 2026-02-12 08:27:10,597 [wrapper] pilotpid: 2720391
[2026-02-12 09:27:10] 2026-02-12 08:27:10,599 [wrapper] Pilot exit status: 0
[2026-02-12 09:27:10] 2026-02-12 08:27:10,607 [wrapper] pandaids: 7008679099
[2026-02-12 09:27:10] 2026-02-12 08:27:10,623 [wrapper] cleanup supervisor_pilot 2729969 2720392
[2026-02-12 09:27:10] 2026-02-12 08:27:10,626 [wrapper] Test setup, not cleaning
[2026-02-12 09:27:10] 2026-02-12 08:27:10,628 [wrapper] apfmon messages muted
[2026-02-12 09:27:10] 2026-02-12 08:27:10,630 [wrapper] ==== wrapper stdout END ====
[2026-02-12 09:27:10] 2026-02-12 08:27:10,633 [wrapper] ==== wrapper stderr END ====
[2026-02-12 09:27:10]  *** Error codes and diagnostics ***
[2026-02-12 09:27:10]     "exeErrorCode": 0,
[2026-02-12 09:27:10]     "exeErrorDiag": "",
[2026-02-12 09:27:10]     "pilotErrorCode": 0,
[2026-02-12 09:27:10]     "pilotErrorDiag": "",
[2026-02-12 09:27:10]  *** Listing of results directory ***
[2026-02-12 09:27:10] total 670084
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc      5111 Feb 11 14:18 queuedata.json
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc    584627 Feb 11 14:18 pilot3.tar.gz
[2026-02-12 09:27:10] -rwx------ 1 boinc boinc     36322 Feb 11 14:19 runpilot2-wrapper.sh
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc       100 Feb 12 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 09:27:10] -rwxr-xr-x 1 boinc boinc      7986 Feb 12 07:58 run_atlas
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc       105 Feb 12 07:58 job.xml
[2026-02-12 09:27:10] -rw-r--r-- 2 boinc boinc 501057651 Feb 12 07:58 EVNT.48442027._000193.pool.root.1
[2026-02-12 09:27:10] -rw-r--r-- 2 boinc boinc    597955 Feb 12 07:58 input.tar.gz
[2026-02-12 09:27:10] -rw-r--r-- 2 boinc boinc     15845 Feb 12 07:58 start_atlas.sh
[2026-02-12 09:27:10] drwxrwx--x 2 boinc boinc      4096 Feb 12 07:58 shared
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc         0 Feb 12 07:58 boinc_setup_complete
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc      6274 Feb 12 07:58 init_data.xml
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc         0 Feb 12 07:58 boinc_lockfile
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc      2529 Feb 12 07:58 pandaJob.out
[2026-02-12 09:27:10] -rw------- 1 boinc boinc   1004345 Feb 12 07:58 agis_schedconf.cvmfs.json
[2026-02-12 09:27:10] -rw------- 1 boinc boinc   1512955 Feb 12 07:58 agis_ddmendpoints.agis.ALL.json
[2026-02-12 09:27:10] -rw------- 1 boinc boinc       429 Feb 12 07:58 workernode_map.json
[2026-02-12 09:27:10] drwx------ 5 boinc boinc      4096 Feb 12 07:58 pilot3
[2026-02-12 09:27:10] -rw------- 1 boinc boinc 179060655 Feb 12 09:25 HITS.48442031._010035.pool.root.1
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc       531 Feb 12 09:26 boinc_task_state.xml
[2026-02-12 09:27:10] -rw------- 1 boinc boinc      1020 Feb 12 09:26 memory_monitor_summary.json
[2026-02-12 09:27:10] -rw------- 1 boinc boinc    293344 Feb 12 09:26 log.48442031._010035.job.log.tgz.1
[2026-02-12 09:27:10] -rw------- 1 boinc boinc        95 Feb 12 09:26 pilot_heartbeat.json
[2026-02-12 09:27:10] -rw------- 1 boinc boinc      6311 Feb 12 09:26 heartbeat.json
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc        27 Feb 12 09:27 wrapper_checkpoint.txt
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc      8192 Feb 12 09:27 boinc_mmap_file
[2026-02-12 09:27:10] -rw------- 1 boinc boinc      4748 Feb 12 09:27 pilotlog.txt
[2026-02-12 09:27:10] -rw------- 1 boinc boinc    765143 Feb 12 09:27 log.48442031._010035.job.log.1
[2026-02-12 09:27:10] -rw------- 1 boinc boinc       357 Feb 12 09:27 output.list
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc       620 Feb 12 09:27 runtime_log
[2026-02-12 09:27:10] -rw------- 1 boinc boinc   1075200 Feb 12 09:27 result.tar.gz
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc      8906 Feb 12 09:27 runtime_log.err
[2026-02-12 09:27:10] -rw------- 1 boinc boinc       659 Feb 12 09:27 FpHODmnIPA9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNPjKDmZE1dPn.diag
[2026-02-12 09:27:10] -rw-r--r-- 1 boinc boinc     21049 Feb 12 09:27 stderr.txt
[2026-02-12 09:27:10] HITS file was successfully produced:
[2026-02-12 09:27:10] -rw------- 1 boinc boinc 179060655 Feb 12 09:25 shared/HITS.pool.root.1
[2026-02-12 09:27:10]  *** Contents of shared directory: ***
[2026-02-12 09:27:10] total 665836
[2026-02-12 09:27:10] -rw-r--r-- 2 boinc boinc 501057651 Feb 12 07:58 ATLAS.root_0
[2026-02-12 09:27:10] -rw-r--r-- 2 boinc boinc    597955 Feb 12 07:58 input.tar.gz
[2026-02-12 09:27:10] -rw-r--r-- 2 boinc boinc     15845 Feb 12 07:58 start_atlas.sh
[2026-02-12 09:27:10] -rw------- 1 boinc boinc 179060655 Feb 12 09:25 HITS.pool.root.1
[2026-02-12 09:27:10] -rw------- 1 boinc boinc   1075200 Feb 12 09:27 result.tar.gz
09:27:12 (2716346): run_atlas exited; CPU time 14935.110528
09:27:12 (2716346): called boinc_finish(0)

</stderr_txt>
]]>

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